Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5K:D13:D12
Extra
PDB:
ATOM 1 O3' G A 12 8.834 19.669 113.787 1.00 53.46 O
ATOM 2 P U A 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 3 OP1 U A 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 4 OP2 U A 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 5 O5' U A 13 9.796 21.963 113.521 1.00 66.04 O
ATOM 6 C5' U A 13 10.141 21.911 112.143 1.00 54.15 C
ATOM 7 C4' U A 13 10.045 23.277 111.517 1.00 61.34 C
ATOM 8 O4' U A 13 8.666 23.734 111.519 1.00 67.15 O
ATOM 9 C3' U A 13 10.792 24.389 112.226 1.00 66.78 C
ATOM 10 O3' U A 13 12.181 24.349 111.914 1.00 58.89 O
ATOM 11 C2' U A 13 10.097 25.621 111.658 1.00 64.27 C
ATOM 12 O2' U A 13 10.507 25.905 110.336 1.00 60.13 O
ATOM 13 C1' U A 13 8.641 25.150 111.627 1.00 69.51 C
ATOM 14 N1 U A 13 7.890 25.506 112.839 1.00 69.95 N
ATOM 15 C2 U A 13 7.414 26.800 112.945 1.00 68.67 C
ATOM 16 O2 U A 13 7.617 27.645 112.097 1.00 70.59 O
ATOM 17 N3 U A 13 6.694 27.061 114.086 1.00 63.55 N
ATOM 18 C4 U A 13 6.417 26.175 115.110 1.00 64.63 C
ATOM 19 O4 U A 13 5.734 26.544 116.065 1.00 70.78 O
ATOM 20 C5 U A 13 6.961 24.865 114.929 1.00 59.34 C
ATOM 21 C6 U A 13 7.661 24.584 113.829 1.00 62.88 C
ATOM 22 P C A 14 13.260 24.577 113.083 1.00 66.43 P
ATOM 23 OP1 C A 14 14.618 24.290 112.563 1.00 45.57 O
ATOM 24 OP2 C A 14 12.765 23.844 114.280 1.00 66.01 O
ATOM 25 O5' C A 14 13.146 26.136 113.383 1.00 76.13 O
TER
ATOM 1 P G B 12 5.725 21.557 117.771 1.00 65.22 P
ATOM 2 OP1 G B 12 6.793 21.393 118.787 1.00 77.62 O
ATOM 3 OP2 G B 12 5.095 22.882 117.574 1.00 88.29 O
ATOM 4 O5' G B 12 6.314 21.112 116.362 1.00 81.59 O
ATOM 5 C5' G B 12 5.703 20.055 115.635 1.00 62.73 C
ATOM 6 C4' G B 12 6.748 19.210 114.949 1.00 53.79 C
ATOM 7 O4' G B 12 6.093 18.092 114.314 1.00 68.29 O
ATOM 8 C3' G B 12 7.445 19.992 113.843 1.00 43.93 C
ATOM 9 O3' G B 12 8.834 19.669 113.787 1.00 53.46 O
ATOM 10 C2' G B 12 6.703 19.621 112.562 1.00 39.70 C
ATOM 11 O2' G B 12 7.587 19.470 111.471 1.00 47.76 O
ATOM 12 C1' G B 12 6.159 18.238 112.922 1.00 54.80 C
ATOM 13 N9 G B 12 4.925 17.760 112.314 1.00 61.01 N
ATOM 14 C8 G B 12 4.684 16.473 111.909 1.00 66.53 C
ATOM 15 N7 G B 12 3.535 16.328 111.314 1.00 75.29 N
ATOM 16 C5 G B 12 2.973 17.593 111.346 1.00 70.92 C
ATOM 17 C6 G B 12 1.743 18.050 110.841 1.00 68.20 C
ATOM 18 O6 G B 12 0.886 17.414 110.228 1.00 66.71 O
ATOM 19 N1 G B 12 1.556 19.403 111.099 1.00 75.37 N
ATOM 20 C2 G B 12 2.454 20.214 111.746 1.00 71.83 C
ATOM 21 N2 G B 12 2.092 21.488 111.890 1.00 77.92 N
ATOM 22 N3 G B 12 3.618 19.800 112.214 1.00 72.62 N
ATOM 23 C4 G B 12 3.811 18.486 111.981 1.00 68.87 C
ATOM 24 P U B 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 25 OP1 U B 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 26 OP2 U B 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 27 O5' U B 13 9.796 21.963 113.521 1.00 66.04 O
TER
ATOM 2 P U A 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 3 OP1 U A 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 4 OP2 U A 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 5 O5' U A 13 9.796 21.963 113.521 1.00 66.04 O
ATOM 6 C5' U A 13 10.141 21.911 112.143 1.00 54.15 C
ATOM 7 C4' U A 13 10.045 23.277 111.517 1.00 61.34 C
ATOM 8 O4' U A 13 8.666 23.734 111.519 1.00 67.15 O
ATOM 9 C3' U A 13 10.792 24.389 112.226 1.00 66.78 C
ATOM 10 O3' U A 13 12.181 24.349 111.914 1.00 58.89 O
ATOM 11 C2' U A 13 10.097 25.621 111.658 1.00 64.27 C
ATOM 12 O2' U A 13 10.507 25.905 110.336 1.00 60.13 O
ATOM 13 C1' U A 13 8.641 25.150 111.627 1.00 69.51 C
ATOM 14 N1 U A 13 7.890 25.506 112.839 1.00 69.95 N
ATOM 15 C2 U A 13 7.414 26.800 112.945 1.00 68.67 C
ATOM 16 O2 U A 13 7.617 27.645 112.097 1.00 70.59 O
ATOM 17 N3 U A 13 6.694 27.061 114.086 1.00 63.55 N
ATOM 18 C4 U A 13 6.417 26.175 115.110 1.00 64.63 C
ATOM 19 O4 U A 13 5.734 26.544 116.065 1.00 70.78 O
ATOM 20 C5 U A 13 6.961 24.865 114.929 1.00 59.34 C
ATOM 21 C6 U A 13 7.661 24.584 113.829 1.00 62.88 C
ATOM 22 P C A 14 13.260 24.577 113.083 1.00 66.43 P
ATOM 23 OP1 C A 14 14.618 24.290 112.563 1.00 45.57 O
ATOM 24 OP2 C A 14 12.765 23.844 114.280 1.00 66.01 O
ATOM 25 O5' C A 14 13.146 26.136 113.383 1.00 76.13 O
TER
ATOM 1 P G B 12 5.725 21.557 117.771 1.00 65.22 P
ATOM 2 OP1 G B 12 6.793 21.393 118.787 1.00 77.62 O
ATOM 3 OP2 G B 12 5.095 22.882 117.574 1.00 88.29 O
ATOM 4 O5' G B 12 6.314 21.112 116.362 1.00 81.59 O
ATOM 5 C5' G B 12 5.703 20.055 115.635 1.00 62.73 C
ATOM 6 C4' G B 12 6.748 19.210 114.949 1.00 53.79 C
ATOM 7 O4' G B 12 6.093 18.092 114.314 1.00 68.29 O
ATOM 8 C3' G B 12 7.445 19.992 113.843 1.00 43.93 C
ATOM 9 O3' G B 12 8.834 19.669 113.787 1.00 53.46 O
ATOM 10 C2' G B 12 6.703 19.621 112.562 1.00 39.70 C
ATOM 11 O2' G B 12 7.587 19.470 111.471 1.00 47.76 O
ATOM 12 C1' G B 12 6.159 18.238 112.922 1.00 54.80 C
ATOM 13 N9 G B 12 4.925 17.760 112.314 1.00 61.01 N
ATOM 14 C8 G B 12 4.684 16.473 111.909 1.00 66.53 C
ATOM 15 N7 G B 12 3.535 16.328 111.314 1.00 75.29 N
ATOM 16 C5 G B 12 2.973 17.593 111.346 1.00 70.92 C
ATOM 17 C6 G B 12 1.743 18.050 110.841 1.00 68.20 C
ATOM 18 O6 G B 12 0.886 17.414 110.228 1.00 66.71 O
ATOM 19 N1 G B 12 1.556 19.403 111.099 1.00 75.37 N
ATOM 20 C2 G B 12 2.454 20.214 111.746 1.00 71.83 C
ATOM 21 N2 G B 12 2.092 21.488 111.890 1.00 77.92 N
ATOM 22 N3 G B 12 3.618 19.800 112.214 1.00 72.62 N
ATOM 23 C4 G B 12 3.811 18.486 111.981 1.00 68.87 C
ATOM 24 P U B 13 9.930 20.651 114.409 1.00 56.99 P
ATOM 25 OP1 U B 13 11.250 20.065 114.105 1.00 48.71 O
ATOM 26 OP2 U B 13 9.554 20.914 115.815 1.00 57.64 O
ATOM 27 O5' U B 13 9.796 21.963 113.521 1.00 66.04 O
TER
Atoms:
C4: (6.417,26.175,115.110)
N3: (6.694,27.061,114.086)
OP1: (11.250,20.065,114.105)
OP2: (9.554,20.914,115.815)
C2: (7.414,26.800,112.945)
C1': (8.641,25.150,111.627)
C3': (10.792,24.389,112.226)
O5': (9.796,21.963,113.521)
O4': (8.666,23.734,111.519)
C5': (10.141,21.911,112.143)
P: (9.930,20.651,114.409)
C4': (10.045,23.277,111.517)
C2': (10.097,25.621,111.658)
O2': (10.507,25.905,110.336)
N1: (7.890,25.506,112.839)
O4: (5.734,26.544,116.065)
O2: (7.617,27.645,112.097)
C6: (7.661,24.584,113.829)
C5: (6.961,24.865,114.929)
O3': (12.181,24.349,111.914)
N3: (6.694,27.061,114.086)
OP1: (11.250,20.065,114.105)
OP2: (9.554,20.914,115.815)
C2: (7.414,26.800,112.945)
C1': (8.641,25.150,111.627)
C3': (10.792,24.389,112.226)
O5': (9.796,21.963,113.521)
O4': (8.666,23.734,111.519)
C5': (10.141,21.911,112.143)
P: (9.930,20.651,114.409)
C4': (10.045,23.277,111.517)
C2': (10.097,25.621,111.658)
O2': (10.507,25.905,110.336)
N1: (7.890,25.506,112.839)
O4: (5.734,26.544,116.065)
O2: (7.617,27.645,112.097)
C6: (7.661,24.584,113.829)
C5: (6.961,24.865,114.929)
O3': (12.181,24.349,111.914)
OP1: (6.793,21.393,118.787)
OP2: (5.095,22.882,117.574)
C3': (7.445,19.992,113.843)
C1': (6.159,18.238,112.922)
C5': (5.703,20.055,115.635)
O6: (0.886,17.414,110.228)
O4': (6.093,18.092,114.314)
C8: (4.684,16.473,111.909)
C2: (2.454,20.214,111.746)
C6: (1.743,18.050,110.841)
C5: (2.973,17.593,111.346)
C4: (3.811,18.486,111.981)
P: (5.725,21.557,117.771)
C4': (6.748,19.210,114.949)
C2': (6.703,19.621,112.562)
O2': (7.587,19.470,111.471)
N1: (1.556,19.403,111.099)
N2: (2.092,21.488,111.890)
N3: (3.618,19.800,112.214)
N7: (3.535,16.328,111.314)
N9: (4.925,17.760,112.314)
O5': (6.314,21.112,116.362)
O3': (8.834,19.669,113.787)
OP2: (5.095,22.882,117.574)
C3': (7.445,19.992,113.843)
C1': (6.159,18.238,112.922)
C5': (5.703,20.055,115.635)
O6: (0.886,17.414,110.228)
O4': (6.093,18.092,114.314)
C8: (4.684,16.473,111.909)
C2: (2.454,20.214,111.746)
C6: (1.743,18.050,110.841)
C5: (2.973,17.593,111.346)
C4: (3.811,18.486,111.981)
P: (5.725,21.557,117.771)
C4': (6.748,19.210,114.949)
C2': (6.703,19.621,112.562)
O2': (7.587,19.470,111.471)
N1: (1.556,19.403,111.099)
N2: (2.092,21.488,111.890)
N3: (3.618,19.800,112.214)
N7: (3.535,16.328,111.314)
N9: (4.925,17.760,112.314)
O5': (6.314,21.112,116.362)
O3': (8.834,19.669,113.787)
Image (generated by PyMOL):