Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1928:1929
Extra
PDB:
ATOM 1 O3' A A 927 61.164 -39.119 37.811 1.00 56.41 O
ATOM 2 P G A 928 60.687 -37.877 38.709 1.00 43.40 P
ATOM 3 OP1 G A 928 61.734 -36.829 38.607 1.00 43.29 O
ATOM 4 OP2 G A 928 60.329 -38.402 40.069 1.00 43.25 O
ATOM 5 O5' G A 928 59.354 -37.424 37.944 1.00 43.34 O
ATOM 6 C5' G A 928 58.280 -38.335 37.805 1.00 43.48 C
ATOM 7 C4' G A 928 57.058 -37.670 37.290 1.00 43.37 C
ATOM 8 O4' G A 928 56.580 -36.729 38.261 1.00 42.99 O
ATOM 9 C3' G A 928 57.235 -36.894 36.010 1.00 43.46 C
ATOM 10 O3' G A 928 56.113 -37.117 35.192 1.00 43.59 O
ATOM 11 C2' G A 928 57.245 -35.465 36.494 1.00 43.10 C
ATOM 12 O2' G A 928 56.883 -34.507 35.530 1.00 43.09 O
ATOM 13 C1' G A 928 56.242 -35.552 37.607 1.00 42.86 C
ATOM 14 N9 G A 928 56.302 -34.455 38.559 1.00 42.51 N
ATOM 15 C8 G A 928 57.410 -34.004 39.192 1.00 42.38 C
ATOM 16 N7 G A 928 57.196 -33.010 39.984 1.00 42.07 N
ATOM 17 C5 G A 928 55.866 -32.779 39.860 1.00 41.99 C
ATOM 18 C6 G A 928 55.112 -31.779 40.501 1.00 41.69 C
ATOM 19 O6 G A 928 55.507 -30.905 41.295 1.00 41.45 O
ATOM 20 N1 G A 928 53.790 -31.830 40.113 1.00 41.70 N
ATOM 21 C2 G A 928 53.287 -32.751 39.227 1.00 41.97 C
ATOM 22 N2 G A 928 51.940 -32.577 39.049 1.00 41.93 N
ATOM 23 N3 G A 928 54.005 -33.715 38.590 1.00 42.27 N
ATOM 24 C4 G A 928 55.283 -33.651 38.969 1.00 42.25 C
ATOM 25 P U A 929 56.097 -38.403 34.242 1.00 43.69 P
ATOM 26 OP1 U A 929 54.761 -38.507 33.667 1.00 43.76 O
ATOM 27 OP2 U A 929 56.613 -39.532 35.006 1.00 43.80 O
ATOM 28 O5' U A 929 57.158 -38.020 33.117 1.00 43.89 O
TER
ATOM 1 O3' G B 928 56.113 -37.117 35.192 1.00 43.59 O
ATOM 2 P U B 929 56.097 -38.403 34.242 1.00 43.69 P
ATOM 3 OP1 U B 929 54.761 -38.507 33.667 1.00 43.76 O
ATOM 4 OP2 U B 929 56.613 -39.532 35.006 1.00 43.80 O
ATOM 5 O5' U B 929 57.158 -38.020 33.117 1.00 43.89 O
ATOM 6 C5' U B 929 56.833 -37.100 32.108 1.00 43.90 C
ATOM 7 C4' U B 929 57.593 -37.372 30.854 1.00 44.26 C
ATOM 8 O4' U B 929 58.974 -37.579 31.154 1.00 44.32 O
ATOM 9 C3' U B 929 57.216 -38.617 30.077 1.00 44.66 C
ATOM 10 O3' U B 929 56.013 -38.438 29.343 1.00 44.74 O
ATOM 11 C2' U B 929 58.445 -38.797 29.195 1.00 44.97 C
ATOM 12 O2' U B 929 58.421 -37.852 28.141 1.00 45.01 O
ATOM 13 C1' U B 929 59.552 -38.374 30.145 1.00 44.73 C
ATOM 14 N1 U B 929 60.220 -39.505 30.763 1.00 44.87 N
ATOM 15 C2 U B 929 61.025 -40.271 29.967 1.00 45.27 C
ATOM 16 O2 U B 929 61.165 -40.083 28.778 1.00 45.50 O
ATOM 17 N3 U B 929 61.634 -41.306 30.623 1.00 45.39 N
ATOM 18 C4 U B 929 61.547 -41.624 31.964 1.00 45.17 C
ATOM 19 O4 U B 929 62.155 -42.597 32.416 1.00 45.35 O
ATOM 20 C5 U B 929 60.715 -40.737 32.712 1.00 44.76 C
ATOM 21 C6 U B 929 60.099 -39.728 32.104 1.00 44.63 C
ATOM 22 P U B 930 55.241 -39.675 28.679 1.00 41.94 P
ATOM 23 OP1 U B 930 53.950 -39.133 28.174 1.00 41.90 O
ATOM 24 OP2 U B 930 55.213 -40.768 29.672 1.00 41.95 O
ATOM 25 O5' U B 930 56.166 -40.101 27.458 1.00 42.37 O
TER
ATOM 2 P G A 928 60.687 -37.877 38.709 1.00 43.40 P
ATOM 3 OP1 G A 928 61.734 -36.829 38.607 1.00 43.29 O
ATOM 4 OP2 G A 928 60.329 -38.402 40.069 1.00 43.25 O
ATOM 5 O5' G A 928 59.354 -37.424 37.944 1.00 43.34 O
ATOM 6 C5' G A 928 58.280 -38.335 37.805 1.00 43.48 C
ATOM 7 C4' G A 928 57.058 -37.670 37.290 1.00 43.37 C
ATOM 8 O4' G A 928 56.580 -36.729 38.261 1.00 42.99 O
ATOM 9 C3' G A 928 57.235 -36.894 36.010 1.00 43.46 C
ATOM 10 O3' G A 928 56.113 -37.117 35.192 1.00 43.59 O
ATOM 11 C2' G A 928 57.245 -35.465 36.494 1.00 43.10 C
ATOM 12 O2' G A 928 56.883 -34.507 35.530 1.00 43.09 O
ATOM 13 C1' G A 928 56.242 -35.552 37.607 1.00 42.86 C
ATOM 14 N9 G A 928 56.302 -34.455 38.559 1.00 42.51 N
ATOM 15 C8 G A 928 57.410 -34.004 39.192 1.00 42.38 C
ATOM 16 N7 G A 928 57.196 -33.010 39.984 1.00 42.07 N
ATOM 17 C5 G A 928 55.866 -32.779 39.860 1.00 41.99 C
ATOM 18 C6 G A 928 55.112 -31.779 40.501 1.00 41.69 C
ATOM 19 O6 G A 928 55.507 -30.905 41.295 1.00 41.45 O
ATOM 20 N1 G A 928 53.790 -31.830 40.113 1.00 41.70 N
ATOM 21 C2 G A 928 53.287 -32.751 39.227 1.00 41.97 C
ATOM 22 N2 G A 928 51.940 -32.577 39.049 1.00 41.93 N
ATOM 23 N3 G A 928 54.005 -33.715 38.590 1.00 42.27 N
ATOM 24 C4 G A 928 55.283 -33.651 38.969 1.00 42.25 C
ATOM 25 P U A 929 56.097 -38.403 34.242 1.00 43.69 P
ATOM 26 OP1 U A 929 54.761 -38.507 33.667 1.00 43.76 O
ATOM 27 OP2 U A 929 56.613 -39.532 35.006 1.00 43.80 O
ATOM 28 O5' U A 929 57.158 -38.020 33.117 1.00 43.89 O
TER
ATOM 1 O3' G B 928 56.113 -37.117 35.192 1.00 43.59 O
ATOM 2 P U B 929 56.097 -38.403 34.242 1.00 43.69 P
ATOM 3 OP1 U B 929 54.761 -38.507 33.667 1.00 43.76 O
ATOM 4 OP2 U B 929 56.613 -39.532 35.006 1.00 43.80 O
ATOM 5 O5' U B 929 57.158 -38.020 33.117 1.00 43.89 O
ATOM 6 C5' U B 929 56.833 -37.100 32.108 1.00 43.90 C
ATOM 7 C4' U B 929 57.593 -37.372 30.854 1.00 44.26 C
ATOM 8 O4' U B 929 58.974 -37.579 31.154 1.00 44.32 O
ATOM 9 C3' U B 929 57.216 -38.617 30.077 1.00 44.66 C
ATOM 10 O3' U B 929 56.013 -38.438 29.343 1.00 44.74 O
ATOM 11 C2' U B 929 58.445 -38.797 29.195 1.00 44.97 C
ATOM 12 O2' U B 929 58.421 -37.852 28.141 1.00 45.01 O
ATOM 13 C1' U B 929 59.552 -38.374 30.145 1.00 44.73 C
ATOM 14 N1 U B 929 60.220 -39.505 30.763 1.00 44.87 N
ATOM 15 C2 U B 929 61.025 -40.271 29.967 1.00 45.27 C
ATOM 16 O2 U B 929 61.165 -40.083 28.778 1.00 45.50 O
ATOM 17 N3 U B 929 61.634 -41.306 30.623 1.00 45.39 N
ATOM 18 C4 U B 929 61.547 -41.624 31.964 1.00 45.17 C
ATOM 19 O4 U B 929 62.155 -42.597 32.416 1.00 45.35 O
ATOM 20 C5 U B 929 60.715 -40.737 32.712 1.00 44.76 C
ATOM 21 C6 U B 929 60.099 -39.728 32.104 1.00 44.63 C
ATOM 22 P U B 930 55.241 -39.675 28.679 1.00 41.94 P
ATOM 23 OP1 U B 930 53.950 -39.133 28.174 1.00 41.90 O
ATOM 24 OP2 U B 930 55.213 -40.768 29.672 1.00 41.95 O
ATOM 25 O5' U B 930 56.166 -40.101 27.458 1.00 42.37 O
TER
Atoms:
OP1: (61.734,-36.829,38.607)
OP2: (60.329,-38.402,40.069)
C3': (57.235,-36.894,36.010)
C1': (56.242,-35.552,37.607)
C5': (58.280,-38.335,37.805)
O6: (55.507,-30.905,41.295)
O4': (56.580,-36.729,38.261)
C8: (57.410,-34.004,39.192)
C2: (53.287,-32.751,39.227)
C6: (55.112,-31.779,40.501)
C5: (55.866,-32.779,39.860)
C4: (55.283,-33.651,38.969)
P: (60.687,-37.877,38.709)
C4': (57.058,-37.670,37.290)
C2': (57.245,-35.465,36.494)
O2': (56.883,-34.507,35.530)
N1: (53.790,-31.830,40.113)
N2: (51.940,-32.577,39.049)
N3: (54.005,-33.715,38.590)
N7: (57.196,-33.010,39.984)
N9: (56.302,-34.455,38.559)
O5': (59.354,-37.424,37.944)
O3': (56.113,-37.117,35.192)
OP2: (60.329,-38.402,40.069)
C3': (57.235,-36.894,36.010)
C1': (56.242,-35.552,37.607)
C5': (58.280,-38.335,37.805)
O6: (55.507,-30.905,41.295)
O4': (56.580,-36.729,38.261)
C8: (57.410,-34.004,39.192)
C2: (53.287,-32.751,39.227)
C6: (55.112,-31.779,40.501)
C5: (55.866,-32.779,39.860)
C4: (55.283,-33.651,38.969)
P: (60.687,-37.877,38.709)
C4': (57.058,-37.670,37.290)
C2': (57.245,-35.465,36.494)
O2': (56.883,-34.507,35.530)
N1: (53.790,-31.830,40.113)
N2: (51.940,-32.577,39.049)
N3: (54.005,-33.715,38.590)
N7: (57.196,-33.010,39.984)
N9: (56.302,-34.455,38.559)
O5': (59.354,-37.424,37.944)
O3': (56.113,-37.117,35.192)
C4: (61.547,-41.624,31.964)
N3: (61.634,-41.306,30.623)
OP1: (54.761,-38.507,33.667)
OP2: (56.613,-39.532,35.006)
C2: (61.025,-40.271,29.967)
C1': (59.552,-38.374,30.145)
C3': (57.216,-38.617,30.077)
O5': (57.158,-38.020,33.117)
O4': (58.974,-37.579,31.154)
C5': (56.833,-37.100,32.108)
P: (56.097,-38.403,34.242)
C4': (57.593,-37.372,30.854)
C2': (58.445,-38.797,29.195)
O2': (58.421,-37.852,28.141)
N1: (60.220,-39.505,30.763)
O4: (62.155,-42.597,32.416)
O2: (61.165,-40.083,28.778)
C6: (60.099,-39.728,32.104)
C5: (60.715,-40.737,32.712)
O3': (56.013,-38.438,29.343)
N3: (61.634,-41.306,30.623)
OP1: (54.761,-38.507,33.667)
OP2: (56.613,-39.532,35.006)
C2: (61.025,-40.271,29.967)
C1': (59.552,-38.374,30.145)
C3': (57.216,-38.617,30.077)
O5': (57.158,-38.020,33.117)
O4': (58.974,-37.579,31.154)
C5': (56.833,-37.100,32.108)
P: (56.097,-38.403,34.242)
C4': (57.593,-37.372,30.854)
C2': (58.445,-38.797,29.195)
O2': (58.421,-37.852,28.141)
N1: (60.220,-39.505,30.763)
O4: (62.155,-42.597,32.416)
O2: (61.165,-40.083,28.778)
C6: (60.099,-39.728,32.104)
C5: (60.715,-40.737,32.712)
O3': (56.013,-38.438,29.343)
Image (generated by PyMOL):