Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YFG:A7:A6
Extra
PDB:
ATOM 1 O3' G A 6 0.671 27.083 -19.785 1.00 35.27 O
ATOM 2 P U A 7 -0.125 28.265 -20.522 1.00 36.23 P
ATOM 3 OP1 U A 7 0.461 29.575 -20.058 1.00 36.26 O
ATOM 4 OP2 U A 7 -1.564 28.019 -20.276 1.00 36.03 O
ATOM 5 O5' U A 7 0.290 28.117 -22.065 1.00 37.09 O
ATOM 6 C5' U A 7 1.524 28.797 -22.447 1.00 38.37 C
ATOM 7 C4' U A 7 1.439 29.043 -23.949 1.00 39.37 C
ATOM 8 O4' U A 7 0.978 27.891 -24.618 1.00 39.29 O
ATOM 9 C3' U A 7 0.438 30.126 -24.345 1.00 40.34 C
ATOM 10 O3' U A 7 0.989 31.436 -24.236 1.00 41.88 O
ATOM 11 C2' U A 7 0.136 29.742 -25.792 1.00 39.82 C
ATOM 12 O2' U A 7 1.291 30.146 -26.530 1.00 40.00 O
ATOM 13 C1' U A 7 0.136 28.245 -25.710 1.00 39.25 C
ATOM 14 N1 U A 7 -1.211 27.723 -25.533 1.00 38.92 N
ATOM 15 C2 U A 7 -2.092 27.891 -26.584 1.00 39.10 C
ATOM 16 O2 U A 7 -1.729 28.462 -27.608 1.00 39.59 O
ATOM 17 N3 U A 7 -3.355 27.398 -26.448 1.00 39.33 N
ATOM 18 C4 U A 7 -3.764 26.768 -25.315 1.00 39.16 C
ATOM 19 O4 U A 7 -4.964 26.345 -25.274 1.00 39.08 O
ATOM 20 C5 U A 7 -2.837 26.601 -24.250 1.00 39.16 C
ATOM 21 C6 U A 7 -1.603 27.083 -24.400 1.00 38.99 C
TER
ATOM 1 O3' C B 5 -3.804 21.932 -20.413 1.00 34.63 O
ATOM 2 P G B 6 -2.638 22.395 -21.423 1.00 34.37 P
ATOM 3 OP1 G B 6 -3.412 23.223 -22.365 1.00 34.26 O
ATOM 4 OP2 G B 6 -1.916 21.204 -21.928 1.00 34.40 O
ATOM 5 O5' G B 6 -1.632 23.193 -20.467 1.00 34.22 O
ATOM 6 C5' G B 6 -1.973 24.592 -20.331 1.00 34.16 C
ATOM 7 C4' G B 6 -0.887 25.212 -19.512 1.00 34.13 C
ATOM 8 O4' G B 6 -0.421 24.306 -18.542 1.00 33.90 O
ATOM 9 C3' G B 6 0.330 25.764 -20.222 1.00 34.41 C
ATOM 10 O3' G B 6 0.671 27.083 -19.785 1.00 35.27 O
ATOM 11 C2' G B 6 1.427 24.749 -19.894 1.00 34.04 C
ATOM 12 O2' G B 6 2.661 25.448 -19.962 1.00 33.89 O
ATOM 13 C1' G B 6 1.023 24.345 -18.501 1.00 33.77 C
ATOM 14 N9 G B 6 1.524 23.006 -18.173 1.00 33.50 N
ATOM 15 C8 G B 6 0.955 21.804 -18.501 1.00 33.57 C
ATOM 16 N7 G B 6 1.626 20.761 -18.078 1.00 33.62 N
ATOM 17 C5 G B 6 2.718 21.332 -17.423 1.00 33.62 C
ATOM 18 C6 G B 6 3.810 20.741 -16.740 1.00 33.87 C
ATOM 19 O6 G B 6 4.003 19.520 -16.603 1.00 34.11 O
ATOM 20 N1 G B 6 4.702 21.637 -16.207 1.00 33.82 N
ATOM 21 C2 G B 6 4.532 22.976 -16.330 1.00 33.76 C
ATOM 22 N2 G B 6 5.481 23.735 -15.770 1.00 33.72 N
ATOM 23 N3 G B 6 3.525 23.577 -16.958 1.00 33.67 N
ATOM 24 C4 G B 6 2.655 22.701 -17.477 1.00 33.53 C
ATOM 25 P U B 7 -0.125 28.265 -20.522 1.00 36.23 P
ATOM 26 OP1 U B 7 0.461 29.575 -20.058 1.00 36.26 O
ATOM 27 OP2 U B 7 -1.564 28.019 -20.276 1.00 36.03 O
ATOM 28 O5' U B 7 0.290 28.117 -22.065 1.00 37.09 O
TER
ATOM 2 P U A 7 -0.125 28.265 -20.522 1.00 36.23 P
ATOM 3 OP1 U A 7 0.461 29.575 -20.058 1.00 36.26 O
ATOM 4 OP2 U A 7 -1.564 28.019 -20.276 1.00 36.03 O
ATOM 5 O5' U A 7 0.290 28.117 -22.065 1.00 37.09 O
ATOM 6 C5' U A 7 1.524 28.797 -22.447 1.00 38.37 C
ATOM 7 C4' U A 7 1.439 29.043 -23.949 1.00 39.37 C
ATOM 8 O4' U A 7 0.978 27.891 -24.618 1.00 39.29 O
ATOM 9 C3' U A 7 0.438 30.126 -24.345 1.00 40.34 C
ATOM 10 O3' U A 7 0.989 31.436 -24.236 1.00 41.88 O
ATOM 11 C2' U A 7 0.136 29.742 -25.792 1.00 39.82 C
ATOM 12 O2' U A 7 1.291 30.146 -26.530 1.00 40.00 O
ATOM 13 C1' U A 7 0.136 28.245 -25.710 1.00 39.25 C
ATOM 14 N1 U A 7 -1.211 27.723 -25.533 1.00 38.92 N
ATOM 15 C2 U A 7 -2.092 27.891 -26.584 1.00 39.10 C
ATOM 16 O2 U A 7 -1.729 28.462 -27.608 1.00 39.59 O
ATOM 17 N3 U A 7 -3.355 27.398 -26.448 1.00 39.33 N
ATOM 18 C4 U A 7 -3.764 26.768 -25.315 1.00 39.16 C
ATOM 19 O4 U A 7 -4.964 26.345 -25.274 1.00 39.08 O
ATOM 20 C5 U A 7 -2.837 26.601 -24.250 1.00 39.16 C
ATOM 21 C6 U A 7 -1.603 27.083 -24.400 1.00 38.99 C
TER
ATOM 1 O3' C B 5 -3.804 21.932 -20.413 1.00 34.63 O
ATOM 2 P G B 6 -2.638 22.395 -21.423 1.00 34.37 P
ATOM 3 OP1 G B 6 -3.412 23.223 -22.365 1.00 34.26 O
ATOM 4 OP2 G B 6 -1.916 21.204 -21.928 1.00 34.40 O
ATOM 5 O5' G B 6 -1.632 23.193 -20.467 1.00 34.22 O
ATOM 6 C5' G B 6 -1.973 24.592 -20.331 1.00 34.16 C
ATOM 7 C4' G B 6 -0.887 25.212 -19.512 1.00 34.13 C
ATOM 8 O4' G B 6 -0.421 24.306 -18.542 1.00 33.90 O
ATOM 9 C3' G B 6 0.330 25.764 -20.222 1.00 34.41 C
ATOM 10 O3' G B 6 0.671 27.083 -19.785 1.00 35.27 O
ATOM 11 C2' G B 6 1.427 24.749 -19.894 1.00 34.04 C
ATOM 12 O2' G B 6 2.661 25.448 -19.962 1.00 33.89 O
ATOM 13 C1' G B 6 1.023 24.345 -18.501 1.00 33.77 C
ATOM 14 N9 G B 6 1.524 23.006 -18.173 1.00 33.50 N
ATOM 15 C8 G B 6 0.955 21.804 -18.501 1.00 33.57 C
ATOM 16 N7 G B 6 1.626 20.761 -18.078 1.00 33.62 N
ATOM 17 C5 G B 6 2.718 21.332 -17.423 1.00 33.62 C
ATOM 18 C6 G B 6 3.810 20.741 -16.740 1.00 33.87 C
ATOM 19 O6 G B 6 4.003 19.520 -16.603 1.00 34.11 O
ATOM 20 N1 G B 6 4.702 21.637 -16.207 1.00 33.82 N
ATOM 21 C2 G B 6 4.532 22.976 -16.330 1.00 33.76 C
ATOM 22 N2 G B 6 5.481 23.735 -15.770 1.00 33.72 N
ATOM 23 N3 G B 6 3.525 23.577 -16.958 1.00 33.67 N
ATOM 24 C4 G B 6 2.655 22.701 -17.477 1.00 33.53 C
ATOM 25 P U B 7 -0.125 28.265 -20.522 1.00 36.23 P
ATOM 26 OP1 U B 7 0.461 29.575 -20.058 1.00 36.26 O
ATOM 27 OP2 U B 7 -1.564 28.019 -20.276 1.00 36.03 O
ATOM 28 O5' U B 7 0.290 28.117 -22.065 1.00 37.09 O
TER
Atoms:
C4: (-3.764,26.768,-25.315)
N3: (-3.355,27.398,-26.448)
OP1: (0.461,29.575,-20.058)
OP2: (-1.564,28.019,-20.276)
C2: (-2.092,27.891,-26.584)
C1': (0.136,28.245,-25.710)
C3': (0.438,30.126,-24.345)
O5': (0.290,28.117,-22.065)
O4': (0.978,27.891,-24.618)
C5': (1.524,28.797,-22.447)
P: (-0.125,28.265,-20.522)
C4': (1.439,29.043,-23.949)
C2': (0.136,29.742,-25.792)
O2': (1.291,30.146,-26.530)
N1: (-1.211,27.723,-25.533)
O4: (-4.964,26.345,-25.274)
O2: (-1.729,28.462,-27.608)
C6: (-1.603,27.083,-24.400)
C5: (-2.837,26.601,-24.250)
O3': (0.989,31.436,-24.236)
N3: (-3.355,27.398,-26.448)
OP1: (0.461,29.575,-20.058)
OP2: (-1.564,28.019,-20.276)
C2: (-2.092,27.891,-26.584)
C1': (0.136,28.245,-25.710)
C3': (0.438,30.126,-24.345)
O5': (0.290,28.117,-22.065)
O4': (0.978,27.891,-24.618)
C5': (1.524,28.797,-22.447)
P: (-0.125,28.265,-20.522)
C4': (1.439,29.043,-23.949)
C2': (0.136,29.742,-25.792)
O2': (1.291,30.146,-26.530)
N1: (-1.211,27.723,-25.533)
O4: (-4.964,26.345,-25.274)
O2: (-1.729,28.462,-27.608)
C6: (-1.603,27.083,-24.400)
C5: (-2.837,26.601,-24.250)
O3': (0.989,31.436,-24.236)
OP1: (-3.412,23.223,-22.365)
OP2: (-1.916,21.204,-21.928)
C3': (0.330,25.764,-20.222)
C1': (1.023,24.345,-18.501)
C5': (-1.973,24.592,-20.331)
O6: (4.003,19.520,-16.603)
O4': (-0.421,24.306,-18.542)
C8: (0.955,21.804,-18.501)
C2: (4.532,22.976,-16.330)
C6: (3.810,20.741,-16.740)
C5: (2.718,21.332,-17.423)
C4: (2.655,22.701,-17.477)
P: (-2.638,22.395,-21.423)
C4': (-0.887,25.212,-19.512)
C2': (1.427,24.749,-19.894)
O2': (2.661,25.448,-19.962)
N1: (4.702,21.637,-16.207)
N2: (5.481,23.735,-15.770)
N3: (3.525,23.577,-16.958)
N7: (1.626,20.761,-18.078)
N9: (1.524,23.006,-18.173)
O5': (-1.632,23.193,-20.467)
O3': (0.671,27.083,-19.785)
OP2: (-1.916,21.204,-21.928)
C3': (0.330,25.764,-20.222)
C1': (1.023,24.345,-18.501)
C5': (-1.973,24.592,-20.331)
O6: (4.003,19.520,-16.603)
O4': (-0.421,24.306,-18.542)
C8: (0.955,21.804,-18.501)
C2: (4.532,22.976,-16.330)
C6: (3.810,20.741,-16.740)
C5: (2.718,21.332,-17.423)
C4: (2.655,22.701,-17.477)
P: (-2.638,22.395,-21.423)
C4': (-0.887,25.212,-19.512)
C2': (1.427,24.749,-19.894)
O2': (2.661,25.448,-19.962)
N1: (4.702,21.637,-16.207)
N2: (5.481,23.735,-15.770)
N3: (3.525,23.577,-16.958)
N7: (1.626,20.761,-18.078)
N9: (1.524,23.006,-18.173)
O5': (-1.632,23.193,-20.467)
O3': (0.671,27.083,-19.785)
Image (generated by PyMOL):