ClaRNA

Doublet info:

Details

Nucleotide types: GC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01018:01019

Extra

PDB:
ATOM 1 O3' A A1017 54.509 97.675 109.867 1.00 49.98 O
ATOM 2 P G A1018 53.279 96.684 110.205 1.00 54.40 P
ATOM 3 OP1 G A1018 52.764 97.077 111.550 1.00 53.53 O
ATOM 4 OP2 G A1018 53.669 95.265 109.937 1.00 52.16 O
ATOM 5 O5' G A1018 52.172 97.066 109.127 1.00 54.64 O
ATOM 6 C5' G A1018 51.610 98.384 109.086 1.00 51.24 C
ATOM 7 C4' G A1018 51.673 98.917 107.682 1.00 49.52 C
ATOM 8 O4' G A1018 51.059 100.233 107.658 1.00 48.73 O
ATOM 9 C3' G A1018 53.088 99.098 107.141 1.00 49.85 C
ATOM 10 O3' G A1018 53.084 98.916 105.717 1.00 49.93 O
ATOM 11 C2' G A1018 53.373 100.552 107.503 1.00 49.25 C
ATOM 12 O2' G A1018 54.378 101.105 106.686 1.00 52.54 O
ATOM 13 C1' G A1018 52.008 101.186 107.233 1.00 46.76 C
ATOM 14 N9 G A1018 51.701 102.463 107.875 1.00 43.74 N
ATOM 15 C8 G A1018 52.367 103.074 108.908 1.00 43.28 C
ATOM 16 N7 G A1018 51.855 104.229 109.236 1.00 41.29 N
ATOM 17 C5 G A1018 50.785 104.391 108.370 1.00 38.99 C
ATOM 18 C6 G A1018 49.874 105.459 108.237 1.00 39.40 C
ATOM 19 O6 G A1018 49.828 106.514 108.872 1.00 39.67 O
ATOM 20 N1 G A1018 48.945 105.218 107.232 1.00 39.75 N
ATOM 21 C2 G A1018 48.900 104.093 106.453 1.00 40.01 C
ATOM 22 N2 G A1018 47.919 104.049 105.536 1.00 38.77 N
ATOM 23 N3 G A1018 49.752 103.089 106.563 1.00 38.94 N
ATOM 24 C4 G A1018 50.664 103.306 107.534 1.00 40.76 C
ATOM 25 P C A1019 54.014 97.781 105.037 1.00 49.27 P
ATOM 26 OP1 C A1019 53.582 97.630 103.620 1.00 53.25 O
ATOM 27 OP2 C A1019 54.059 96.592 105.906 1.00 52.07 O
ATOM 28 O5' C A1019 55.460 98.444 104.985 1.00 51.07 O
TER

ATOM 1 O3' G B1018 53.084 98.916 105.717 1.00 49.93 O
ATOM 2 P C B1019 54.014 97.781 105.037 1.00 49.27 P
ATOM 3 OP1 C B1019 53.582 97.630 103.620 1.00 53.25 O
ATOM 4 OP2 C B1019 54.059 96.592 105.906 1.00 52.07 O
ATOM 5 O5' C B1019 55.460 98.444 104.985 1.00 51.07 O
ATOM 6 C5' C B1019 56.438 98.135 105.961 1.00 47.03 C
ATOM 7 C4' C B1019 57.758 97.817 105.310 1.00 46.57 C
ATOM 8 O4' C B1019 58.564 97.223 106.363 1.00 47.62 O
ATOM 9 C3' C B1019 57.750 96.781 104.179 1.00 45.19 C
ATOM 10 O3' C B1019 57.608 97.379 102.872 1.00 45.10 O
ATOM 11 C2' C B1019 59.107 96.114 104.344 1.00 45.83 C
ATOM 12 O2' C B1019 60.157 96.907 103.826 1.00 46.35 O
ATOM 13 C1' C B1019 59.240 96.085 105.868 1.00 46.86 C
ATOM 14 N1 C B1019 58.670 94.885 106.513 1.00 44.91 N
ATOM 15 C2 C B1019 59.437 93.721 106.549 1.00 46.32 C
ATOM 16 O2 C B1019 60.562 93.732 106.031 1.00 45.73 O
ATOM 17 N3 C B1019 58.936 92.611 107.146 1.00 47.44 N
ATOM 18 C4 C B1019 57.716 92.637 107.687 1.00 47.75 C
ATOM 19 N4 C B1019 57.261 91.511 108.261 1.00 47.32 N
ATOM 20 C5 C B1019 56.907 93.812 107.662 1.00 45.97 C
ATOM 21 C6 C B1019 57.419 94.902 107.070 1.00 46.52 C
ATOM 22 P C B1020 57.236 96.460 101.575 1.00 43.28 P
ATOM 23 OP1 C B1020 57.210 97.355 100.388 1.00 45.17 O
ATOM 24 OP2 C B1020 56.031 95.649 101.898 1.00 46.24 O
ATOM 25 O5' C B1020 58.458 95.444 101.405 1.00 42.24 O
TER

Atoms:
OP1: (52.764,97.077,111.550)
OP2: (53.669,95.265,109.937)
C3': (53.088,99.098,107.141)
C1': (52.008,101.186,107.233)
C5': (51.610,98.384,109.086)
O6: (49.828,106.514,108.872)
O4': (51.059,100.233,107.658)
C8: (52.367,103.074,108.908)
C2: (48.900,104.093,106.453)
C6: (49.874,105.459,108.237)
C5: (50.785,104.391,108.370)
C4: (50.664,103.306,107.534)
P: (53.279,96.684,110.205)
C4': (51.673,98.917,107.682)
C2': (53.373,100.552,107.503)
O2': (54.378,101.105,106.686)
N1: (48.945,105.218,107.232)
N2: (47.919,104.049,105.536)
N3: (49.752,103.089,106.563)
N7: (51.855,104.229,109.236)
N9: (51.701,102.463,107.875)
O5': (52.172,97.066,109.127)
O3': (53.084,98.916,105.717)
C2: (59.437,93.721,106.549)
OP1: (53.582,97.630,103.620)
OP2: (54.059,96.592,105.906)
C4: (57.716,92.637,107.687)
O5': (55.460,98.444,104.985)
C3': (57.750,96.781,104.179)
C1': (59.240,96.085,105.868)
O4': (58.564,97.223,106.363)
C5': (56.438,98.135,105.961)
P: (54.014,97.781,105.037)
O2: (60.562,93.732,106.031)
C4': (57.758,97.817,105.310)
C2': (59.107,96.114,104.344)
O2': (60.157,96.907,103.826)
N1: (58.670,94.885,106.513)
N3: (58.936,92.611,107.146)
N4: (57.261,91.511,108.261)
C6: (57.419,94.902,107.070)
C5: (56.907,93.812,107.662)
O3': (57.608,97.379,102.872)
Image (generated by PyMOL):
PyMOL image
show in jmol