Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01018:01019
Extra
PDB:
ATOM 1 O3' A A1017 54.553 98.972 110.008 1.00 42.81 O
ATOM 2 P G A1018 53.278 98.093 110.454 1.00 43.85 P
ATOM 3 OP1 G A1018 52.815 98.578 111.793 1.00 39.22 O
ATOM 4 OP2 G A1018 53.598 96.651 110.262 1.00 42.30 O
ATOM 5 O5' G A1018 52.176 98.482 109.373 1.00 42.65 O
ATOM 6 C5' G A1018 51.688 99.825 109.276 1.00 40.64 C
ATOM 7 C4' G A1018 51.794 100.313 107.853 1.00 39.37 C
ATOM 8 O4' G A1018 51.192 101.635 107.764 1.00 38.55 O
ATOM 9 C3' G A1018 53.214 100.466 107.318 1.00 38.90 C
ATOM 10 O3' G A1018 53.183 100.286 105.906 1.00 38.58 O
ATOM 11 C2' G A1018 53.514 101.927 107.631 1.00 39.03 C
ATOM 12 O2' G A1018 54.523 102.462 106.802 1.00 41.38 O
ATOM 13 C1' G A1018 52.160 102.562 107.324 1.00 37.73 C
ATOM 14 N9 G A1018 51.861 103.862 107.919 1.00 35.97 N
ATOM 15 C8 G A1018 52.531 104.522 108.919 1.00 35.48 C
ATOM 16 N7 G A1018 52.008 105.684 109.205 1.00 34.52 N
ATOM 17 C5 G A1018 50.927 105.794 108.347 1.00 35.05 C
ATOM 18 C6 G A1018 49.983 106.839 108.182 1.00 36.11 C
ATOM 19 O6 G A1018 49.899 107.911 108.796 1.00 36.61 O
ATOM 20 N1 G A1018 49.064 106.541 107.179 1.00 37.14 N
ATOM 21 C2 G A1018 49.050 105.389 106.431 1.00 37.06 C
ATOM 22 N2 G A1018 48.091 105.293 105.499 1.00 38.95 N
ATOM 23 N3 G A1018 49.914 104.407 106.582 1.00 36.87 N
ATOM 24 C4 G A1018 50.821 104.676 107.549 1.00 36.51 C
ATOM 25 P C A1019 53.953 99.049 105.234 1.00 42.29 P
ATOM 26 OP1 C A1019 53.520 98.963 103.816 1.00 43.66 O
ATOM 27 OP2 C A1019 53.782 97.866 106.114 1.00 42.89 O
ATOM 28 O5' C A1019 55.476 99.515 105.208 1.00 41.41 O
TER
ATOM 1 O3' G B1018 53.183 100.286 105.906 1.00 38.58 O
ATOM 2 P C B1019 53.953 99.049 105.234 1.00 42.29 P
ATOM 3 OP1 C B1019 53.520 98.963 103.816 1.00 43.66 O
ATOM 4 OP2 C B1019 53.782 97.866 106.114 1.00 42.89 O
ATOM 5 O5' C B1019 55.476 99.515 105.208 1.00 41.41 O
ATOM 6 C5' C B1019 56.420 99.007 106.140 1.00 38.65 C
ATOM 7 C4' C B1019 57.765 98.831 105.483 1.00 39.00 C
ATOM 8 O4' C B1019 58.685 98.337 106.495 1.00 41.89 O
ATOM 9 C3' C B1019 57.840 97.826 104.333 1.00 39.69 C
ATOM 10 O3' C B1019 57.625 98.438 103.058 1.00 40.11 O
ATOM 11 C2' C B1019 59.246 97.256 104.483 1.00 39.52 C
ATOM 12 O2' C B1019 60.241 98.125 103.972 1.00 36.95 O
ATOM 13 C1' C B1019 59.369 97.196 106.007 1.00 39.80 C
ATOM 14 N1 C B1019 58.766 95.987 106.613 1.00 38.19 N
ATOM 15 C2 C B1019 59.542 94.831 106.707 1.00 38.16 C
ATOM 16 O2 C B1019 60.706 94.859 106.289 1.00 40.69 O
ATOM 17 N3 C B1019 59.005 93.710 107.247 1.00 37.76 N
ATOM 18 C4 C B1019 57.742 93.715 107.682 1.00 37.83 C
ATOM 19 N4 C B1019 57.254 92.583 108.191 1.00 36.47 N
ATOM 20 C5 C B1019 56.925 94.883 107.610 1.00 38.01 C
ATOM 21 C6 C B1019 57.473 95.986 107.072 1.00 39.30 C
ATOM 22 P C B1020 57.276 97.532 101.762 1.00 41.74 P
ATOM 23 OP1 C B1020 57.349 98.434 100.578 1.00 42.86 O
ATOM 24 OP2 C B1020 56.018 96.772 102.018 1.00 40.89 O
ATOM 25 O5' C B1020 58.484 96.494 101.644 1.00 38.61 O
TER
ATOM 2 P G A1018 53.278 98.093 110.454 1.00 43.85 P
ATOM 3 OP1 G A1018 52.815 98.578 111.793 1.00 39.22 O
ATOM 4 OP2 G A1018 53.598 96.651 110.262 1.00 42.30 O
ATOM 5 O5' G A1018 52.176 98.482 109.373 1.00 42.65 O
ATOM 6 C5' G A1018 51.688 99.825 109.276 1.00 40.64 C
ATOM 7 C4' G A1018 51.794 100.313 107.853 1.00 39.37 C
ATOM 8 O4' G A1018 51.192 101.635 107.764 1.00 38.55 O
ATOM 9 C3' G A1018 53.214 100.466 107.318 1.00 38.90 C
ATOM 10 O3' G A1018 53.183 100.286 105.906 1.00 38.58 O
ATOM 11 C2' G A1018 53.514 101.927 107.631 1.00 39.03 C
ATOM 12 O2' G A1018 54.523 102.462 106.802 1.00 41.38 O
ATOM 13 C1' G A1018 52.160 102.562 107.324 1.00 37.73 C
ATOM 14 N9 G A1018 51.861 103.862 107.919 1.00 35.97 N
ATOM 15 C8 G A1018 52.531 104.522 108.919 1.00 35.48 C
ATOM 16 N7 G A1018 52.008 105.684 109.205 1.00 34.52 N
ATOM 17 C5 G A1018 50.927 105.794 108.347 1.00 35.05 C
ATOM 18 C6 G A1018 49.983 106.839 108.182 1.00 36.11 C
ATOM 19 O6 G A1018 49.899 107.911 108.796 1.00 36.61 O
ATOM 20 N1 G A1018 49.064 106.541 107.179 1.00 37.14 N
ATOM 21 C2 G A1018 49.050 105.389 106.431 1.00 37.06 C
ATOM 22 N2 G A1018 48.091 105.293 105.499 1.00 38.95 N
ATOM 23 N3 G A1018 49.914 104.407 106.582 1.00 36.87 N
ATOM 24 C4 G A1018 50.821 104.676 107.549 1.00 36.51 C
ATOM 25 P C A1019 53.953 99.049 105.234 1.00 42.29 P
ATOM 26 OP1 C A1019 53.520 98.963 103.816 1.00 43.66 O
ATOM 27 OP2 C A1019 53.782 97.866 106.114 1.00 42.89 O
ATOM 28 O5' C A1019 55.476 99.515 105.208 1.00 41.41 O
TER
ATOM 1 O3' G B1018 53.183 100.286 105.906 1.00 38.58 O
ATOM 2 P C B1019 53.953 99.049 105.234 1.00 42.29 P
ATOM 3 OP1 C B1019 53.520 98.963 103.816 1.00 43.66 O
ATOM 4 OP2 C B1019 53.782 97.866 106.114 1.00 42.89 O
ATOM 5 O5' C B1019 55.476 99.515 105.208 1.00 41.41 O
ATOM 6 C5' C B1019 56.420 99.007 106.140 1.00 38.65 C
ATOM 7 C4' C B1019 57.765 98.831 105.483 1.00 39.00 C
ATOM 8 O4' C B1019 58.685 98.337 106.495 1.00 41.89 O
ATOM 9 C3' C B1019 57.840 97.826 104.333 1.00 39.69 C
ATOM 10 O3' C B1019 57.625 98.438 103.058 1.00 40.11 O
ATOM 11 C2' C B1019 59.246 97.256 104.483 1.00 39.52 C
ATOM 12 O2' C B1019 60.241 98.125 103.972 1.00 36.95 O
ATOM 13 C1' C B1019 59.369 97.196 106.007 1.00 39.80 C
ATOM 14 N1 C B1019 58.766 95.987 106.613 1.00 38.19 N
ATOM 15 C2 C B1019 59.542 94.831 106.707 1.00 38.16 C
ATOM 16 O2 C B1019 60.706 94.859 106.289 1.00 40.69 O
ATOM 17 N3 C B1019 59.005 93.710 107.247 1.00 37.76 N
ATOM 18 C4 C B1019 57.742 93.715 107.682 1.00 37.83 C
ATOM 19 N4 C B1019 57.254 92.583 108.191 1.00 36.47 N
ATOM 20 C5 C B1019 56.925 94.883 107.610 1.00 38.01 C
ATOM 21 C6 C B1019 57.473 95.986 107.072 1.00 39.30 C
ATOM 22 P C B1020 57.276 97.532 101.762 1.00 41.74 P
ATOM 23 OP1 C B1020 57.349 98.434 100.578 1.00 42.86 O
ATOM 24 OP2 C B1020 56.018 96.772 102.018 1.00 40.89 O
ATOM 25 O5' C B1020 58.484 96.494 101.644 1.00 38.61 O
TER
Atoms:
OP1: (52.815,98.578,111.793)
OP2: (53.598,96.651,110.262)
C3': (53.214,100.466,107.318)
C1': (52.160,102.562,107.324)
C5': (51.688,99.825,109.276)
O6: (49.899,107.911,108.796)
O4': (51.192,101.635,107.764)
C8: (52.531,104.522,108.919)
C2: (49.050,105.389,106.431)
C6: (49.983,106.839,108.182)
C5: (50.927,105.794,108.347)
C4: (50.821,104.676,107.549)
P: (53.278,98.093,110.454)
C4': (51.794,100.313,107.853)
C2': (53.514,101.927,107.631)
O2': (54.523,102.462,106.802)
N1: (49.064,106.541,107.179)
N2: (48.091,105.293,105.499)
N3: (49.914,104.407,106.582)
N7: (52.008,105.684,109.205)
N9: (51.861,103.862,107.919)
O5': (52.176,98.482,109.373)
O3': (53.183,100.286,105.906)
OP2: (53.598,96.651,110.262)
C3': (53.214,100.466,107.318)
C1': (52.160,102.562,107.324)
C5': (51.688,99.825,109.276)
O6: (49.899,107.911,108.796)
O4': (51.192,101.635,107.764)
C8: (52.531,104.522,108.919)
C2: (49.050,105.389,106.431)
C6: (49.983,106.839,108.182)
C5: (50.927,105.794,108.347)
C4: (50.821,104.676,107.549)
P: (53.278,98.093,110.454)
C4': (51.794,100.313,107.853)
C2': (53.514,101.927,107.631)
O2': (54.523,102.462,106.802)
N1: (49.064,106.541,107.179)
N2: (48.091,105.293,105.499)
N3: (49.914,104.407,106.582)
N7: (52.008,105.684,109.205)
N9: (51.861,103.862,107.919)
O5': (52.176,98.482,109.373)
O3': (53.183,100.286,105.906)
C2: (59.542,94.831,106.707)
OP1: (53.520,98.963,103.816)
OP2: (53.782,97.866,106.114)
C4: (57.742,93.715,107.682)
O5': (55.476,99.515,105.208)
C3': (57.840,97.826,104.333)
C1': (59.369,97.196,106.007)
O4': (58.685,98.337,106.495)
C5': (56.420,99.007,106.140)
P: (53.953,99.049,105.234)
O2: (60.706,94.859,106.289)
C4': (57.765,98.831,105.483)
C2': (59.246,97.256,104.483)
O2': (60.241,98.125,103.972)
N1: (58.766,95.987,106.613)
N3: (59.005,93.710,107.247)
N4: (57.254,92.583,108.191)
C6: (57.473,95.986,107.072)
C5: (56.925,94.883,107.610)
O3': (57.625,98.438,103.058)
OP1: (53.520,98.963,103.816)
OP2: (53.782,97.866,106.114)
C4: (57.742,93.715,107.682)
O5': (55.476,99.515,105.208)
C3': (57.840,97.826,104.333)
C1': (59.369,97.196,106.007)
O4': (58.685,98.337,106.495)
C5': (56.420,99.007,106.140)
P: (53.953,99.049,105.234)
O2: (60.706,94.859,106.289)
C4': (57.765,98.831,105.483)
C2': (59.246,97.256,104.483)
O2': (60.241,98.125,103.972)
N1: (58.766,95.987,106.613)
N3: (59.005,93.710,107.247)
N4: (57.254,92.583,108.191)
C6: (57.473,95.986,107.072)
C5: (56.925,94.883,107.610)
O3': (57.625,98.438,103.058)
Image (generated by PyMOL):