ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:0661:0660

Extra

PDB:
ATOM 1 O3' G A 660 28.331 116.320 27.026 1.00 67.22 O
ATOM 2 P U A 661 29.552 117.338 27.271 1.00 65.79 P
ATOM 3 OP1 U A 661 29.459 117.713 28.710 1.00 65.31 O
ATOM 4 OP2 U A 661 29.519 118.401 26.229 1.00 64.88 O
ATOM 5 O5' U A 661 30.864 116.458 27.054 1.00 62.52 O
ATOM 6 C5' U A 661 31.211 115.436 27.993 1.00 60.73 C
ATOM 7 C4' U A 661 32.702 115.233 28.019 1.00 60.81 C
ATOM 8 O4' U A 661 33.125 114.623 26.776 1.00 60.24 O
ATOM 9 C3' U A 661 33.567 116.479 28.195 1.00 61.71 C
ATOM 10 O3' U A 661 34.748 116.093 28.907 1.00 62.74 O
ATOM 11 C2' U A 661 33.941 116.805 26.754 1.00 61.29 C
ATOM 12 O2' U A 661 35.143 117.531 26.621 1.00 61.90 O
ATOM 13 C1' U A 661 34.143 115.403 26.201 1.00 61.96 C
ATOM 14 N1 U A 661 34.077 115.280 24.741 1.00 65.40 N
ATOM 15 C2 U A 661 35.275 115.120 24.066 1.00 67.13 C
ATOM 16 O2 U A 661 36.362 115.135 24.630 1.00 67.41 O
ATOM 17 N3 U A 661 35.156 114.953 22.706 1.00 68.50 N
ATOM 18 C4 U A 661 33.987 114.946 21.966 1.00 68.45 C
ATOM 19 O4 U A 661 34.040 114.727 20.752 1.00 70.04 O
ATOM 20 C5 U A 661 32.794 115.150 22.732 1.00 67.22 C
ATOM 21 C6 U A 661 32.876 115.304 24.059 1.00 66.67 C
ATOM 22 P A A 662 35.147 116.819 30.293 1.00 62.02 P
ATOM 23 OP1 A A 662 33.938 117.262 31.044 1.00 62.23 O
ATOM 24 OP2 A A 662 36.211 117.807 29.976 1.00 61.28 O
ATOM 25 O5' A A 662 35.813 115.644 31.128 1.00 58.78 O
TER

ATOM 1 O3' A B 659 28.123 113.110 21.451 1.00 67.29 O
ATOM 2 P G B 660 27.996 114.702 21.650 1.00 68.43 P
ATOM 3 OP1 G B 660 26.960 115.177 20.697 1.00 68.34 O
ATOM 4 OP2 G B 660 29.353 115.318 21.630 1.00 68.04 O
ATOM 5 O5' G B 660 27.363 114.842 23.103 1.00 67.78 O
ATOM 6 C5' G B 660 26.895 116.112 23.595 1.00 68.20 C
ATOM 7 C4' G B 660 26.870 116.099 25.106 1.00 68.48 C
ATOM 8 O4' G B 660 25.866 115.141 25.550 1.00 68.10 O
ATOM 9 C3' G B 660 28.184 115.669 25.762 1.00 68.67 C
ATOM 10 O3' G B 660 28.331 116.320 27.026 1.00 67.22 O
ATOM 11 C2' G B 660 27.964 114.170 25.955 1.00 68.33 C
ATOM 12 O2' G B 660 28.766 113.564 26.949 1.00 67.34 O
ATOM 13 C1' G B 660 26.485 114.142 26.333 1.00 68.92 C
ATOM 14 N9 G B 660 25.840 112.864 26.063 1.00 70.70 N
ATOM 15 C8 G B 660 25.688 112.241 24.848 1.00 71.44 C
ATOM 16 N7 G B 660 25.116 111.071 24.942 1.00 72.14 N
ATOM 17 C5 G B 660 24.863 110.921 26.300 1.00 71.98 C
ATOM 18 C6 G B 660 24.265 109.848 27.013 1.00 71.79 C
ATOM 19 O6 G B 660 23.824 108.779 26.572 1.00 70.20 O
ATOM 20 N1 G B 660 24.208 110.113 28.379 1.00 72.36 N
ATOM 21 C2 G B 660 24.664 111.262 28.980 1.00 72.10 C
ATOM 22 N2 G B 660 24.531 111.334 30.310 1.00 73.04 N
ATOM 23 N3 G B 660 25.215 112.267 28.326 1.00 71.49 N
ATOM 24 C4 G B 660 25.288 112.028 27.001 1.00 71.48 C
ATOM 25 P U B 661 29.552 117.338 27.271 1.00 65.79 P
ATOM 26 OP1 U B 661 29.459 117.713 28.710 1.00 65.31 O
ATOM 27 OP2 U B 661 29.519 118.401 26.229 1.00 64.88 O
ATOM 28 O5' U B 661 30.864 116.458 27.054 1.00 62.52 O
TER

Atoms:
C4: (33.987,114.946,21.966)
N3: (35.156,114.953,22.706)
OP1: (29.459,117.713,28.710)
OP2: (29.519,118.401,26.229)
C2: (35.275,115.120,24.066)
C1': (34.143,115.403,26.201)
C3': (33.567,116.479,28.195)
O5': (30.864,116.458,27.054)
O4': (33.125,114.623,26.776)
C5': (31.211,115.436,27.993)
P: (29.552,117.338,27.271)
C4': (32.702,115.233,28.019)
C2': (33.941,116.805,26.754)
O2': (35.143,117.531,26.621)
N1: (34.077,115.280,24.741)
O4: (34.040,114.727,20.752)
O2: (36.362,115.135,24.630)
C6: (32.876,115.304,24.059)
C5: (32.794,115.150,22.732)
O3': (34.748,116.093,28.907)
OP1: (26.960,115.177,20.697)
OP2: (29.353,115.318,21.630)
C3': (28.184,115.669,25.762)
C1': (26.485,114.142,26.333)
C5': (26.895,116.112,23.595)
O6: (23.824,108.779,26.572)
O4': (25.866,115.141,25.550)
C8: (25.688,112.241,24.848)
C2: (24.664,111.262,28.980)
C6: (24.265,109.848,27.013)
C5: (24.863,110.921,26.300)
C4: (25.288,112.028,27.001)
P: (27.996,114.702,21.650)
C4': (26.870,116.099,25.106)
C2': (27.964,114.170,25.955)
O2': (28.766,113.564,26.949)
N1: (24.208,110.113,28.379)
N2: (24.531,111.334,30.310)
N3: (25.215,112.267,28.326)
N7: (25.116,111.071,24.942)
N9: (25.840,112.864,26.063)
O5': (27.363,114.842,23.103)
O3': (28.331,116.320,27.026)
Image (generated by PyMOL):
PyMOL image
show in jmol