ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNI:A1032:A1033

Extra

PDB:
ATOM 1 O3' G A1031 116.730 -83.991 13.055 1.00 58.94 O
ATOM 2 P G A1032 115.648 -84.076 11.855 1.00 56.01 P
ATOM 3 OP1 G A1032 115.413 -85.507 11.500 1.00 65.64 O
ATOM 4 OP2 G A1032 116.164 -83.139 10.815 1.00 52.39 O
ATOM 5 O5' G A1032 114.300 -83.451 12.458 1.00 52.43 O
ATOM 6 C5' G A1032 113.803 -82.191 11.985 1.00 58.34 C
ATOM 7 C4' G A1032 112.409 -81.900 12.535 1.00 59.79 C
ATOM 8 O4' G A1032 111.745 -83.167 12.802 1.00 57.93 O
ATOM 9 C3' G A1032 112.322 -81.088 13.827 1.00 59.96 C
ATOM 10 O3' G A1032 111.212 -80.152 13.776 1.00 55.80 O
ATOM 11 C2' G A1032 112.170 -82.177 14.900 1.00 54.11 C
ATOM 12 O2' G A1032 111.527 -81.765 16.082 1.00 63.05 O
ATOM 13 C1' G A1032 111.368 -83.243 14.162 1.00 57.33 C
ATOM 14 N9 G A1032 111.640 -84.611 14.590 1.00 59.65 N
ATOM 15 C8 G A1032 112.739 -85.346 14.245 1.00 54.19 C
ATOM 16 N7 G A1032 112.682 -86.578 14.659 1.00 54.31 N
ATOM 17 C5 G A1032 111.479 -86.662 15.337 1.00 55.36 C
ATOM 18 C6 G A1032 110.881 -87.758 15.966 1.00 57.12 C
ATOM 19 O6 G A1032 111.276 -88.913 16.002 1.00 62.52 O
ATOM 20 N1 G A1032 109.689 -87.419 16.577 1.00 54.83 N
ATOM 21 C2 G A1032 109.125 -86.184 16.556 1.00 54.40 C
ATOM 22 N2 G A1032 107.982 -86.064 17.225 1.00 50.15 N
ATOM 23 N3 G A1032 109.650 -85.141 15.926 1.00 59.96 N
ATOM 24 C4 G A1032 110.833 -85.452 15.341 1.00 60.32 C
ATOM 25 P U A1033 111.181 -78.843 14.742 1.00 58.51 P
ATOM 26 OP1 U A1033 111.845 -79.237 16.005 1.00 61.22 O
ATOM 27 OP2 U A1033 109.814 -78.262 14.813 1.00 58.31 O
ATOM 28 O5' U A1033 112.128 -77.745 14.073 1.00 69.61 O
TER

ATOM 1 O3' G B1032 111.212 -80.152 13.776 1.00 55.80 O
ATOM 2 P U B1033 111.181 -78.843 14.742 1.00 58.51 P
ATOM 3 OP1 U B1033 111.845 -79.237 16.005 1.00 61.22 O
ATOM 4 OP2 U B1033 109.814 -78.262 14.813 1.00 58.31 O
ATOM 5 O5' U B1033 112.128 -77.745 14.073 1.00 69.61 O
ATOM 6 C5' U B1033 112.159 -77.513 12.670 1.00 77.87 C
ATOM 7 C4' U B1033 113.588 -77.294 12.217 1.00 94.67 C
ATOM 8 O4' U B1033 113.758 -78.016 10.983 1.00108.07 O
ATOM 9 C3' U B1033 114.092 -75.859 11.984 1.00103.03 C
ATOM 10 O3' U B1033 115.471 -75.696 12.351 1.00 96.22 O
ATOM 11 C2' U B1033 114.051 -75.714 10.466 1.00111.81 C
ATOM 12 O2' U B1033 115.121 -74.906 9.997 1.00110.49 O
ATOM 13 C1' U B1033 114.265 -77.153 9.989 1.00120.85 C
ATOM 14 N1 U B1033 113.548 -77.435 8.738 1.00128.39 N
ATOM 15 C2 U B1033 114.288 -77.794 7.612 1.00127.51 C
ATOM 16 O2 U B1033 115.509 -77.901 7.612 1.00129.99 O
ATOM 17 N3 U B1033 113.543 -78.026 6.485 1.00121.83 N
ATOM 18 C4 U B1033 112.172 -77.938 6.358 1.00118.10 C
ATOM 19 O4 U B1033 111.651 -78.170 5.264 1.00114.57 O
ATOM 20 C5 U B1033 111.480 -77.569 7.556 1.00119.57 C
ATOM 21 C6 U B1033 112.171 -77.337 8.674 1.00121.33 C
ATOM 22 P A B1034 115.878 -74.706 13.559 1.00 93.28 P
ATOM 23 OP1 A B1034 116.660 -75.540 14.507 1.00 87.67 O
ATOM 24 OP2 A B1034 114.644 -74.019 14.037 1.00 89.32 O
ATOM 25 O5' A B1034 116.902 -73.615 12.980 1.00 82.75 O
TER

Atoms:
OP1: (115.413,-85.507,11.500)
OP2: (116.164,-83.139,10.815)
C3': (112.322,-81.088,13.827)
C1': (111.368,-83.243,14.162)
C5': (113.803,-82.191,11.985)
O6: (111.276,-88.913,16.002)
O4': (111.745,-83.167,12.802)
C8: (112.739,-85.346,14.245)
C2: (109.125,-86.184,16.556)
C6: (110.881,-87.758,15.966)
C5: (111.479,-86.662,15.337)
C4: (110.833,-85.452,15.341)
P: (115.648,-84.076,11.855)
C4': (112.409,-81.900,12.535)
C2': (112.170,-82.177,14.900)
O2': (111.527,-81.765,16.082)
N1: (109.689,-87.419,16.577)
N2: (107.982,-86.064,17.225)
N3: (109.650,-85.141,15.926)
N7: (112.682,-86.578,14.659)
N9: (111.640,-84.611,14.590)
O5': (114.300,-83.451,12.458)
O3': (111.212,-80.152,13.776)
C4: (112.172,-77.938,6.358)
N3: (113.543,-78.026,6.485)
OP1: (111.845,-79.237,16.005)
OP2: (109.814,-78.262,14.813)
C2: (114.288,-77.794,7.612)
C1': (114.265,-77.153,9.989)
C3': (114.092,-75.859,11.984)
O5': (112.128,-77.745,14.073)
O4': (113.758,-78.016,10.983)
C5': (112.159,-77.513,12.670)
P: (111.181,-78.843,14.742)
C4': (113.588,-77.294,12.217)
C2': (114.051,-75.714,10.466)
O2': (115.121,-74.906,9.997)
N1: (113.548,-77.435,8.738)
O4: (111.651,-78.170,5.264)
O2: (115.509,-77.901,7.612)
C6: (112.171,-77.337,8.674)
C5: (111.480,-77.569,7.556)
O3': (115.471,-75.696,12.351)
Image (generated by PyMOL):
PyMOL image
show in jmol