Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2Y9H:B9:B10
Extra
PDB:
ATOM 1 O3' C A 8 -43.288 2.678 65.306 1.00 92.73 O
ATOM 2 P G A 9 -43.987 1.492 64.466 1.00 59.15 P
ATOM 3 OP1 G A 9 -45.241 1.139 65.159 1.00 53.60 O
ATOM 4 OP2 G A 9 -42.960 0.428 64.260 1.00 67.78 O
ATOM 5 O5' G A 9 -44.319 2.193 63.081 1.00 67.64 O
ATOM 6 C5' G A 9 -45.644 2.581 62.756 1.00 53.67 C
ATOM 7 C4' G A 9 -45.844 2.629 61.270 1.00 45.59 C
ATOM 8 O4' G A 9 -44.851 3.513 60.690 1.00 50.62 O
ATOM 9 C3' G A 9 -45.675 1.299 60.564 1.00 53.57 C
ATOM 10 O3' G A 9 -46.467 1.308 59.386 1.00 61.15 O
ATOM 11 C2' G A 9 -44.204 1.311 60.178 1.00 54.37 C
ATOM 12 O2' G A 9 -43.879 0.450 59.102 1.00 47.12 O
ATOM 13 C1' G A 9 -44.005 2.784 59.814 1.00 53.33 C
ATOM 14 N9 G A 9 -42.630 3.279 60.000 1.00 46.58 N
ATOM 15 C8 G A 9 -41.889 3.212 61.155 1.00 41.65 C
ATOM 16 N7 G A 9 -40.703 3.750 61.046 1.00 43.48 N
ATOM 17 C5 G A 9 -40.646 4.212 59.738 1.00 42.54 C
ATOM 18 C6 G A 9 -39.609 4.896 59.039 1.00 52.18 C
ATOM 19 O6 G A 9 -38.485 5.240 59.437 1.00 57.07 O
ATOM 20 N1 G A 9 -39.970 5.190 57.725 1.00 50.51 N
ATOM 21 C2 G A 9 -41.171 4.871 57.157 1.00 47.21 C
ATOM 22 N2 G A 9 -41.318 5.226 55.875 1.00 32.64 N
ATOM 23 N3 G A 9 -42.146 4.235 57.801 1.00 54.92 N
ATOM 24 C4 G A 9 -41.827 3.936 59.082 1.00 45.80 C
ATOM 25 P U A 10 -47.956 0.738 59.427 1.00 63.28 P
ATOM 26 OP1 U A 10 -48.551 1.163 60.715 1.00 68.21 O
ATOM 27 OP2 U A 10 -48.614 1.144 58.167 1.00 62.08 O
ATOM 28 O5' U A 10 -47.717 -0.831 59.431 1.00 84.16 O
TER
ATOM 1 O3' G B 9 -46.467 1.308 59.386 1.00 61.15 O
ATOM 2 P U B 10 -47.956 0.738 59.427 1.00 63.28 P
ATOM 3 OP1 U B 10 -48.551 1.163 60.715 1.00 68.21 O
ATOM 4 OP2 U B 10 -48.614 1.144 58.167 1.00 62.08 O
ATOM 5 O5' U B 10 -47.717 -0.831 59.431 1.00 84.16 O
ATOM 6 C5' U B 10 -47.640 -1.559 60.648 1.00 87.40 C
ATOM 7 C4' U B 10 -48.654 -2.662 60.668 1.00 91.75 C
ATOM 8 O4' U B 10 -49.782 -2.248 61.484 1.00102.60 O
ATOM 9 C3' U B 10 -49.224 -3.005 59.299 1.00 90.34 C
ATOM 10 O3' U B 10 -49.525 -4.388 59.237 1.00 88.23 O
ATOM 11 C2' U B 10 -50.513 -2.199 59.252 1.00 97.46 C
ATOM 12 O2' U B 10 -51.494 -2.713 58.377 1.00 92.32 O
ATOM 13 C1' U B 10 -50.966 -2.256 60.707 1.00107.90 C
ATOM 14 N1 U B 10 -51.794 -1.102 61.113 1.00122.20 N
ATOM 15 C2 U B 10 -52.592 -1.207 62.235 1.00128.90 C
ATOM 16 O2 U B 10 -52.639 -2.210 62.924 1.00133.00 O
ATOM 17 N3 U B 10 -53.329 -0.085 62.526 1.00130.80 N
ATOM 18 C4 U B 10 -53.353 1.101 61.820 1.00132.20 C
ATOM 19 O4 U B 10 -54.071 2.024 62.208 1.00134.30 O
ATOM 20 C5 U B 10 -52.506 1.127 60.668 1.00129.80 C
ATOM 21 C6 U B 10 -51.778 0.050 60.363 1.00126.90 C
ATOM 22 P G B 11 -48.851 -5.285 58.102 1.00 53.88 P
ATOM 23 OP1 G B 11 -49.483 -4.910 56.817 1.00 51.35 O
ATOM 24 OP2 G B 11 -48.925 -6.695 58.556 1.00 50.40 O
ATOM 25 O5' G B 11 -47.347 -4.787 58.126 1.00 60.56 O
TER
ATOM 2 P G A 9 -43.987 1.492 64.466 1.00 59.15 P
ATOM 3 OP1 G A 9 -45.241 1.139 65.159 1.00 53.60 O
ATOM 4 OP2 G A 9 -42.960 0.428 64.260 1.00 67.78 O
ATOM 5 O5' G A 9 -44.319 2.193 63.081 1.00 67.64 O
ATOM 6 C5' G A 9 -45.644 2.581 62.756 1.00 53.67 C
ATOM 7 C4' G A 9 -45.844 2.629 61.270 1.00 45.59 C
ATOM 8 O4' G A 9 -44.851 3.513 60.690 1.00 50.62 O
ATOM 9 C3' G A 9 -45.675 1.299 60.564 1.00 53.57 C
ATOM 10 O3' G A 9 -46.467 1.308 59.386 1.00 61.15 O
ATOM 11 C2' G A 9 -44.204 1.311 60.178 1.00 54.37 C
ATOM 12 O2' G A 9 -43.879 0.450 59.102 1.00 47.12 O
ATOM 13 C1' G A 9 -44.005 2.784 59.814 1.00 53.33 C
ATOM 14 N9 G A 9 -42.630 3.279 60.000 1.00 46.58 N
ATOM 15 C8 G A 9 -41.889 3.212 61.155 1.00 41.65 C
ATOM 16 N7 G A 9 -40.703 3.750 61.046 1.00 43.48 N
ATOM 17 C5 G A 9 -40.646 4.212 59.738 1.00 42.54 C
ATOM 18 C6 G A 9 -39.609 4.896 59.039 1.00 52.18 C
ATOM 19 O6 G A 9 -38.485 5.240 59.437 1.00 57.07 O
ATOM 20 N1 G A 9 -39.970 5.190 57.725 1.00 50.51 N
ATOM 21 C2 G A 9 -41.171 4.871 57.157 1.00 47.21 C
ATOM 22 N2 G A 9 -41.318 5.226 55.875 1.00 32.64 N
ATOM 23 N3 G A 9 -42.146 4.235 57.801 1.00 54.92 N
ATOM 24 C4 G A 9 -41.827 3.936 59.082 1.00 45.80 C
ATOM 25 P U A 10 -47.956 0.738 59.427 1.00 63.28 P
ATOM 26 OP1 U A 10 -48.551 1.163 60.715 1.00 68.21 O
ATOM 27 OP2 U A 10 -48.614 1.144 58.167 1.00 62.08 O
ATOM 28 O5' U A 10 -47.717 -0.831 59.431 1.00 84.16 O
TER
ATOM 1 O3' G B 9 -46.467 1.308 59.386 1.00 61.15 O
ATOM 2 P U B 10 -47.956 0.738 59.427 1.00 63.28 P
ATOM 3 OP1 U B 10 -48.551 1.163 60.715 1.00 68.21 O
ATOM 4 OP2 U B 10 -48.614 1.144 58.167 1.00 62.08 O
ATOM 5 O5' U B 10 -47.717 -0.831 59.431 1.00 84.16 O
ATOM 6 C5' U B 10 -47.640 -1.559 60.648 1.00 87.40 C
ATOM 7 C4' U B 10 -48.654 -2.662 60.668 1.00 91.75 C
ATOM 8 O4' U B 10 -49.782 -2.248 61.484 1.00102.60 O
ATOM 9 C3' U B 10 -49.224 -3.005 59.299 1.00 90.34 C
ATOM 10 O3' U B 10 -49.525 -4.388 59.237 1.00 88.23 O
ATOM 11 C2' U B 10 -50.513 -2.199 59.252 1.00 97.46 C
ATOM 12 O2' U B 10 -51.494 -2.713 58.377 1.00 92.32 O
ATOM 13 C1' U B 10 -50.966 -2.256 60.707 1.00107.90 C
ATOM 14 N1 U B 10 -51.794 -1.102 61.113 1.00122.20 N
ATOM 15 C2 U B 10 -52.592 -1.207 62.235 1.00128.90 C
ATOM 16 O2 U B 10 -52.639 -2.210 62.924 1.00133.00 O
ATOM 17 N3 U B 10 -53.329 -0.085 62.526 1.00130.80 N
ATOM 18 C4 U B 10 -53.353 1.101 61.820 1.00132.20 C
ATOM 19 O4 U B 10 -54.071 2.024 62.208 1.00134.30 O
ATOM 20 C5 U B 10 -52.506 1.127 60.668 1.00129.80 C
ATOM 21 C6 U B 10 -51.778 0.050 60.363 1.00126.90 C
ATOM 22 P G B 11 -48.851 -5.285 58.102 1.00 53.88 P
ATOM 23 OP1 G B 11 -49.483 -4.910 56.817 1.00 51.35 O
ATOM 24 OP2 G B 11 -48.925 -6.695 58.556 1.00 50.40 O
ATOM 25 O5' G B 11 -47.347 -4.787 58.126 1.00 60.56 O
TER
Atoms:
OP1: (-45.241,1.139,65.159)
OP2: (-42.960,0.428,64.260)
C3': (-45.675,1.299,60.564)
C1': (-44.005,2.784,59.814)
C5': (-45.644,2.581,62.756)
O6: (-38.485,5.240,59.437)
O4': (-44.851,3.513,60.690)
C8: (-41.889,3.212,61.155)
C2: (-41.171,4.871,57.157)
C6: (-39.609,4.896,59.039)
C5: (-40.646,4.212,59.738)
C4: (-41.827,3.936,59.082)
P: (-43.987,1.492,64.466)
C4': (-45.844,2.629,61.270)
C2': (-44.204,1.311,60.178)
O2': (-43.879,0.450,59.102)
N1: (-39.970,5.190,57.725)
N2: (-41.318,5.226,55.875)
N3: (-42.146,4.235,57.801)
N7: (-40.703,3.750,61.046)
N9: (-42.630,3.279,60.000)
O5': (-44.319,2.193,63.081)
O3': (-46.467,1.308,59.386)
OP2: (-42.960,0.428,64.260)
C3': (-45.675,1.299,60.564)
C1': (-44.005,2.784,59.814)
C5': (-45.644,2.581,62.756)
O6: (-38.485,5.240,59.437)
O4': (-44.851,3.513,60.690)
C8: (-41.889,3.212,61.155)
C2: (-41.171,4.871,57.157)
C6: (-39.609,4.896,59.039)
C5: (-40.646,4.212,59.738)
C4: (-41.827,3.936,59.082)
P: (-43.987,1.492,64.466)
C4': (-45.844,2.629,61.270)
C2': (-44.204,1.311,60.178)
O2': (-43.879,0.450,59.102)
N1: (-39.970,5.190,57.725)
N2: (-41.318,5.226,55.875)
N3: (-42.146,4.235,57.801)
N7: (-40.703,3.750,61.046)
N9: (-42.630,3.279,60.000)
O5': (-44.319,2.193,63.081)
O3': (-46.467,1.308,59.386)
C4: (-53.353,1.101,61.820)
N3: (-53.329,-0.085,62.526)
OP1: (-48.551,1.163,60.715)
OP2: (-48.614,1.144,58.167)
C2: (-52.592,-1.207,62.235)
C1': (-50.966,-2.256,60.707)
C3': (-49.224,-3.005,59.299)
O5': (-47.717,-0.831,59.431)
O4': (-49.782,-2.248,61.484)
C5': (-47.640,-1.559,60.648)
P: (-47.956,0.738,59.427)
C4': (-48.654,-2.662,60.668)
C2': (-50.513,-2.199,59.252)
O2': (-51.494,-2.713,58.377)
N1: (-51.794,-1.102,61.113)
O4: (-54.071,2.024,62.208)
O2: (-52.639,-2.210,62.924)
C6: (-51.778,0.050,60.363)
C5: (-52.506,1.127,60.668)
O3': (-49.525,-4.388,59.237)
N3: (-53.329,-0.085,62.526)
OP1: (-48.551,1.163,60.715)
OP2: (-48.614,1.144,58.167)
C2: (-52.592,-1.207,62.235)
C1': (-50.966,-2.256,60.707)
C3': (-49.224,-3.005,59.299)
O5': (-47.717,-0.831,59.431)
O4': (-49.782,-2.248,61.484)
C5': (-47.640,-1.559,60.648)
P: (-47.956,0.738,59.427)
C4': (-48.654,-2.662,60.668)
C2': (-50.513,-2.199,59.252)
O2': (-51.494,-2.713,58.377)
N1: (-51.794,-1.102,61.113)
O4: (-54.071,2.024,62.208)
O2: (-52.639,-2.210,62.924)
C6: (-51.778,0.050,60.363)
C5: (-52.506,1.127,60.668)
O3': (-49.525,-4.388,59.237)
Image (generated by PyMOL):