ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A576:A575

Extra

PDB:
ATOM 1 O3' G A 575 125.687 100.658 -24.742 1.00 33.33 O
ATOM 2 P U A 576 125.220 100.959 -23.242 1.00 33.76 P
ATOM 3 OP1 U A 576 123.878 100.335 -23.131 1.00 35.00 O
ATOM 4 OP2 U A 576 126.276 100.601 -22.252 1.00 33.18 O
ATOM 5 O5' U A 576 125.022 102.530 -23.221 1.00 33.88 O
ATOM 6 C5' U A 576 126.143 103.418 -23.315 1.00 33.52 C
ATOM 7 C4' U A 576 125.681 104.862 -23.329 1.00 33.81 C
ATOM 8 O4' U A 576 125.010 105.186 -24.580 1.00 34.57 O
ATOM 9 C3' U A 576 124.688 105.233 -22.250 1.00 32.46 C
ATOM 10 O3' U A 576 125.333 105.508 -21.044 1.00 31.91 O
ATOM 11 C2' U A 576 123.982 106.443 -22.841 1.00 33.21 C
ATOM 12 O2' U A 576 124.714 107.632 -22.675 1.00 32.65 O
ATOM 13 C1' U A 576 123.945 106.089 -24.331 1.00 34.61 C
ATOM 14 N1 U A 576 122.684 105.431 -24.712 1.00 36.06 N
ATOM 15 C2 U A 576 121.534 106.198 -24.756 1.00 36.66 C
ATOM 16 O2 U A 576 121.516 107.389 -24.494 1.00 35.81 O
ATOM 17 N3 U A 576 120.399 105.512 -25.112 1.00 39.55 N
ATOM 18 C4 U A 576 120.298 104.164 -25.417 1.00 40.28 C
ATOM 19 O4 U A 576 119.214 103.699 -25.789 1.00 41.40 O
ATOM 20 C5 U A 576 121.527 103.447 -25.335 1.00 38.47 C
ATOM 21 C6 U A 576 122.646 104.087 -25.002 1.00 37.17 C
ATOM 22 P C A 577 124.640 105.053 -19.678 1.00 33.94 P
ATOM 23 OP1 C A 577 123.977 103.752 -20.012 1.00 35.41 O
ATOM 24 OP2 C A 577 125.559 105.138 -18.502 1.00 33.22 O
ATOM 25 O5' C A 577 123.497 106.124 -19.506 1.00 34.35 O
TER

ATOM 1 O3' C B 574 120.918 98.267 -27.837 1.00 39.19 O
ATOM 2 P G B 575 120.915 99.151 -26.501 1.00 40.49 P
ATOM 3 OP1 G B 575 120.945 98.235 -25.315 1.00 40.62 O
ATOM 4 OP2 G B 575 119.824 100.146 -26.629 1.00 39.46 O
ATOM 5 O5' G B 575 122.334 99.889 -26.560 1.00 41.34 O
ATOM 6 C5' G B 575 123.565 99.132 -26.658 1.00 39.28 C
ATOM 7 C4' G B 575 124.741 100.056 -26.865 1.00 37.65 C
ATOM 8 O4' G B 575 124.561 100.776 -28.107 1.00 39.09 O
ATOM 9 C3' G B 575 124.914 101.126 -25.807 1.00 35.91 C
ATOM 10 O3' G B 575 125.687 100.658 -24.742 1.00 33.33 O
ATOM 11 C2' G B 575 125.628 102.236 -26.559 1.00 38.37 C
ATOM 12 O2' G B 575 127.024 102.060 -26.612 1.00 39.20 O
ATOM 13 C1' G B 575 125.031 102.105 -27.965 1.00 40.55 C
ATOM 14 N9 G B 575 123.904 103.020 -28.152 1.00 43.44 N
ATOM 15 C8 G B 575 122.582 102.692 -28.352 1.00 43.76 C
ATOM 16 N7 G B 575 121.793 103.732 -28.362 1.00 45.80 N
ATOM 17 C5 G B 575 122.648 104.816 -28.185 1.00 46.11 C
ATOM 18 C6 G B 575 122.369 106.202 -28.086 1.00 46.68 C
ATOM 19 O6 G B 575 121.273 106.768 -28.094 1.00 48.81 O
ATOM 20 N1 G B 575 123.533 106.950 -27.949 1.00 47.28 N
ATOM 21 C2 G B 575 124.801 106.437 -27.902 1.00 45.93 C
ATOM 22 N2 G B 575 125.796 107.326 -27.810 1.00 45.19 N
ATOM 23 N3 G B 575 125.074 105.146 -27.954 1.00 45.66 N
ATOM 24 C4 G B 575 123.957 104.398 -28.096 1.00 45.15 C
ATOM 25 P U B 576 125.220 100.959 -23.242 1.00 33.76 P
ATOM 26 OP1 U B 576 123.878 100.335 -23.131 1.00 35.00 O
ATOM 27 OP2 U B 576 126.276 100.601 -22.252 1.00 33.18 O
ATOM 28 O5' U B 576 125.022 102.530 -23.221 1.00 33.88 O
TER

Atoms:
C4: (120.298,104.164,-25.417)
N3: (120.399,105.512,-25.112)
OP1: (123.878,100.335,-23.131)
OP2: (126.276,100.601,-22.252)
C2: (121.534,106.198,-24.756)
C1': (123.945,106.089,-24.331)
C3': (124.688,105.233,-22.250)
O5': (125.022,102.530,-23.221)
O4': (125.010,105.186,-24.580)
C5': (126.143,103.418,-23.315)
P: (125.220,100.959,-23.242)
C4': (125.681,104.862,-23.329)
C2': (123.982,106.443,-22.841)
O2': (124.714,107.632,-22.675)
N1: (122.684,105.431,-24.712)
O4: (119.214,103.699,-25.789)
O2: (121.516,107.389,-24.494)
C6: (122.646,104.087,-25.002)
C5: (121.527,103.447,-25.335)
O3': (125.333,105.508,-21.044)
OP1: (120.945,98.235,-25.315)
OP2: (119.824,100.146,-26.629)
C3': (124.914,101.126,-25.807)
C1': (125.031,102.105,-27.965)
C5': (123.565,99.132,-26.658)
O6: (121.273,106.768,-28.094)
O4': (124.561,100.776,-28.107)
C8: (122.582,102.692,-28.352)
C2: (124.801,106.437,-27.902)
C6: (122.369,106.202,-28.086)
C5: (122.648,104.816,-28.185)
C4: (123.957,104.398,-28.096)
P: (120.915,99.151,-26.501)
C4': (124.741,100.056,-26.865)
C2': (125.628,102.236,-26.559)
O2': (127.024,102.060,-26.612)
N1: (123.533,106.950,-27.949)
N2: (125.796,107.326,-27.810)
N3: (125.074,105.146,-27.954)
N7: (121.793,103.732,-28.362)
N9: (123.904,103.020,-28.152)
O5': (122.334,99.889,-26.560)
O3': (125.687,100.658,-24.742)
Image (generated by PyMOL):
PyMOL image
show in jmol