ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3I2U:A6:A5

Extra

PDB:
ATOM 1 O3' G A 5 33.821 8.256 54.950 1.00 68.94 O
ATOM 2 P U A 6 34.655 7.901 56.278 1.00 71.77 P
ATOM 3 OP1 U A 6 34.387 6.459 56.500 1.00 70.62 O
ATOM 4 OP2 U A 6 34.345 8.876 57.355 1.00 73.90 O
ATOM 5 O5' U A 6 36.182 8.002 55.855 1.00 69.36 O
ATOM 6 C5' U A 6 36.769 6.972 55.082 1.00 73.19 C
ATOM 7 C4' U A 6 38.260 6.979 55.257 1.00 76.52 C
ATOM 8 O4' U A 6 38.777 8.246 54.779 1.00 78.29 O
ATOM 9 C3' U A 6 38.761 6.888 56.689 1.00 76.51 C
ATOM 10 O3' U A 6 38.837 5.535 57.116 1.00 76.51 O
ATOM 11 C2' U A 6 40.153 7.490 56.562 1.00 80.95 C
ATOM 12 O2' U A 6 41.098 6.569 56.050 1.00 82.03 O
ATOM 13 C1' U A 6 39.904 8.614 55.551 1.00 80.97 C
ATOM 14 N1 U A 6 39.613 9.897 56.200 1.00 80.82 N
ATOM 15 C2 U A 6 40.649 10.517 56.860 1.00 81.58 C
ATOM 16 O2 U A 6 41.775 10.040 56.913 1.00 81.53 O
ATOM 17 N3 U A 6 40.321 11.711 57.460 1.00 81.73 N
ATOM 18 C4 U A 6 39.087 12.327 57.464 1.00 81.52 C
ATOM 19 O4 U A 6 38.954 13.415 58.033 1.00 83.53 O
ATOM 20 C5 U A 6 38.064 11.617 56.756 1.00 80.58 C
ATOM 21 C6 U A 6 38.357 10.456 56.161 1.00 80.36 C
ATOM 22 P C A 7 38.665 5.180 58.672 1.00 76.80 P
ATOM 23 OP1 C A 7 39.196 3.809 58.861 1.00 76.73 O
ATOM 24 OP2 C A 7 37.274 5.491 59.082 1.00 74.86 O
ATOM 25 O5' C A 7 39.656 6.190 59.401 1.00 77.19 O
TER

ATOM 1 P G B 5 33.781 13.671 55.586 1.00 62.13 P
ATOM 2 OP1 G B 5 35.166 13.777 55.086 1.00 69.22 O
ATOM 3 OP2 G B 5 33.540 13.531 57.042 1.00 61.96 O
ATOM 4 O5' G B 5 33.021 12.529 54.761 1.00 62.60 O
ATOM 5 C5' G B 5 32.415 11.390 55.407 1.00 63.04 C
ATOM 6 C4' G B 5 32.500 10.166 54.507 1.00 60.84 C
ATOM 7 O4' G B 5 32.015 10.498 53.193 1.00 62.09 O
ATOM 8 C3' G B 5 33.892 9.551 54.333 1.00 62.83 C
ATOM 9 O3' G B 5 33.821 8.256 54.950 1.00 68.94 O
ATOM 10 C2' G B 5 34.028 9.256 52.825 1.00 62.43 C
ATOM 11 O2' G B 5 34.227 7.890 52.523 1.00 76.53 O
ATOM 12 C1' G B 5 32.666 9.674 52.269 1.00 59.44 C
ATOM 13 N9 G B 5 32.585 10.230 50.923 1.00 57.50 N
ATOM 14 C8 G B 5 31.688 9.846 49.951 1.00 55.35 C
ATOM 15 N7 G B 5 31.876 10.451 48.813 1.00 53.99 N
ATOM 16 C5 G B 5 32.958 11.288 49.046 1.00 53.49 C
ATOM 17 C6 G B 5 33.629 12.164 48.171 1.00 53.13 C
ATOM 18 O6 G B 5 33.421 12.349 46.961 1.00 50.65 O
ATOM 19 N1 G B 5 34.651 12.854 48.822 1.00 52.48 N
ATOM 20 C2 G B 5 34.993 12.694 50.146 1.00 52.32 C
ATOM 21 N2 G B 5 36.004 13.454 50.600 1.00 50.25 N
ATOM 22 N3 G B 5 34.388 11.851 50.966 1.00 52.84 N
ATOM 23 C4 G B 5 33.388 11.185 50.353 1.00 54.57 C
ATOM 24 P U B 6 34.655 7.901 56.278 1.00 71.77 P
ATOM 25 OP1 U B 6 34.387 6.459 56.500 1.00 70.62 O
ATOM 26 OP2 U B 6 34.345 8.876 57.355 1.00 73.90 O
ATOM 27 O5' U B 6 36.182 8.002 55.855 1.00 69.36 O
TER

Atoms:
C4: (39.087,12.327,57.464)
N3: (40.321,11.711,57.460)
OP1: (34.387,6.459,56.500)
OP2: (34.345,8.876,57.355)
C2: (40.649,10.517,56.860)
C1': (39.904,8.614,55.551)
C3': (38.761,6.888,56.689)
O5': (36.182,8.002,55.855)
O4': (38.777,8.246,54.779)
C5': (36.769,6.972,55.082)
P: (34.655,7.901,56.278)
C4': (38.260,6.979,55.257)
C2': (40.153,7.490,56.562)
O2': (41.098,6.569,56.050)
N1: (39.613,9.897,56.200)
O4: (38.954,13.415,58.033)
O2: (41.775,10.040,56.913)
C6: (38.357,10.456,56.161)
C5: (38.064,11.617,56.756)
O3': (38.837,5.535,57.116)
OP1: (35.166,13.777,55.086)
OP2: (33.540,13.531,57.042)
C3': (33.892,9.551,54.333)
C1': (32.666,9.674,52.269)
C5': (32.415,11.390,55.407)
O6: (33.421,12.349,46.961)
O4': (32.015,10.498,53.193)
C8: (31.688,9.846,49.951)
C2: (34.993,12.694,50.146)
C6: (33.629,12.164,48.171)
C5: (32.958,11.288,49.046)
C4: (33.388,11.185,50.353)
P: (33.781,13.671,55.586)
C4': (32.500,10.166,54.507)
C2': (34.028,9.256,52.825)
O2': (34.227,7.890,52.523)
N1: (34.651,12.854,48.822)
N2: (36.004,13.454,50.600)
N3: (34.388,11.851,50.966)
N7: (31.876,10.451,48.813)
N9: (32.585,10.230,50.923)
O5': (33.021,12.529,54.761)
O3': (33.821,8.256,54.950)
Image (generated by PyMOL):
PyMOL image
show in jmol