ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3IVN:B33:B32

Extra

PDB:
ATOM 1 O3' G A 32 -38.676 2.017 14.901 1.00 32.37 O
ATOM 2 P U A 33 -39.778 3.179 15.017 1.00 31.42 P
ATOM 3 OP1 U A 33 -40.732 2.726 16.059 1.00 30.88 O
ATOM 4 OP2 U A 33 -40.272 3.440 13.645 1.00 33.00 O
ATOM 5 O5' U A 33 -38.932 4.426 15.530 1.00 32.29 O
ATOM 6 C5' U A 33 -38.277 4.416 16.799 1.00 30.89 C
ATOM 7 C4' U A 33 -37.427 5.653 16.969 1.00 30.05 C
ATOM 8 O4' U A 33 -36.512 5.715 15.844 1.00 30.71 O
ATOM 9 C3' U A 33 -38.168 6.990 16.981 1.00 30.56 C
ATOM 10 O3' U A 33 -37.455 7.907 17.798 1.00 30.05 O
ATOM 11 C2' U A 33 -38.052 7.460 15.535 1.00 31.74 C
ATOM 12 O2' U A 33 -38.149 8.854 15.366 1.00 32.10 O
ATOM 13 C1' U A 33 -36.668 6.953 15.178 1.00 31.75 C
ATOM 14 N1 U A 33 -36.487 6.716 13.753 1.00 32.62 N
ATOM 15 C2 U A 33 -35.346 7.215 13.158 1.00 33.64 C
ATOM 16 O2 U A 33 -34.495 7.833 13.776 1.00 33.85 O
ATOM 17 N3 U A 33 -35.237 6.960 11.815 1.00 33.86 N
ATOM 18 C4 U A 33 -36.141 6.274 11.031 1.00 35.09 C
ATOM 19 O4 U A 33 -35.907 6.123 9.832 1.00 37.02 O
ATOM 20 C5 U A 33 -37.296 5.793 11.726 1.00 34.41 C
ATOM 21 C6 U A 33 -37.427 6.025 13.032 1.00 33.29 C
ATOM 22 P G A 34 -37.762 8.056 19.367 1.00 30.66 P
ATOM 23 OP1 G A 34 -38.373 6.781 19.825 1.00 27.87 O
ATOM 24 OP2 G A 34 -38.540 9.314 19.513 1.00 29.62 O
ATOM 25 O5' G A 34 -36.294 8.256 19.961 1.00 28.53 O
TER

ATOM 1 O3' G B 31 -38.693 2.256 8.685 1.00 37.86 O
ATOM 2 P G B 32 -39.013 3.340 9.826 1.00 37.69 P
ATOM 3 OP1 G B 32 -40.486 3.349 10.019 1.00 36.25 O
ATOM 4 OP2 G B 32 -38.332 4.579 9.375 1.00 37.36 O
ATOM 5 O5' G B 32 -38.293 2.740 11.113 1.00 34.79 O
ATOM 6 C5' G B 32 -38.749 1.526 11.710 1.00 34.10 C
ATOM 7 C4' G B 32 -37.819 1.099 12.815 1.00 33.88 C
ATOM 8 O4' G B 32 -36.485 0.896 12.285 1.00 34.25 O
ATOM 9 C3' G B 32 -37.629 2.092 13.950 1.00 33.18 C
ATOM 10 O3' G B 32 -38.676 2.017 14.901 1.00 32.37 O
ATOM 11 C2' G B 32 -36.273 1.683 14.515 1.00 31.90 C
ATOM 12 O2' G B 32 -36.433 0.531 15.331 1.00 31.68 O
ATOM 13 C1' G B 32 -35.521 1.269 13.249 1.00 33.00 C
ATOM 14 N9 G B 32 -34.656 2.334 12.689 1.00 32.74 N
ATOM 15 C8 G B 32 -34.985 3.255 11.725 1.00 33.76 C
ATOM 16 N7 G B 32 -34.002 4.063 11.429 1.00 33.21 N
ATOM 17 C5 G B 32 -32.956 3.647 12.241 1.00 32.11 C
ATOM 18 C6 G B 32 -31.632 4.145 12.364 1.00 31.32 C
ATOM 19 O6 G B 32 -31.097 5.083 11.760 1.00 31.13 O
ATOM 20 N1 G B 32 -30.903 3.428 13.307 1.00 30.12 N
ATOM 21 C2 G B 32 -31.383 2.371 14.037 1.00 30.04 C
ATOM 22 N2 G B 32 -30.523 1.810 14.898 1.00 29.22 N
ATOM 23 N3 G B 32 -32.614 1.899 13.931 1.00 31.01 N
ATOM 24 C4 G B 32 -33.342 2.578 13.020 1.00 31.82 C
ATOM 25 P U B 33 -39.778 3.179 15.017 1.00 31.42 P
ATOM 26 OP1 U B 33 -40.732 2.726 16.059 1.00 30.88 O
ATOM 27 OP2 U B 33 -40.272 3.440 13.645 1.00 33.00 O
ATOM 28 O5' U B 33 -38.932 4.426 15.530 1.00 32.29 O
TER

Atoms:
C4: (-36.141,6.274,11.031)
N3: (-35.237,6.960,11.815)
OP1: (-40.732,2.726,16.059)
OP2: (-40.272,3.440,13.645)
C2: (-35.346,7.215,13.158)
C1': (-36.668,6.953,15.178)
C3': (-38.168,6.990,16.981)
O5': (-38.932,4.426,15.530)
O4': (-36.512,5.715,15.844)
C5': (-38.277,4.416,16.799)
P: (-39.778,3.179,15.017)
C4': (-37.427,5.653,16.969)
C2': (-38.052,7.460,15.535)
O2': (-38.149,8.854,15.366)
N1: (-36.487,6.716,13.753)
O4: (-35.907,6.123,9.832)
O2: (-34.495,7.833,13.776)
C6: (-37.427,6.025,13.032)
C5: (-37.296,5.793,11.726)
O3': (-37.455,7.907,17.798)
OP1: (-40.486,3.349,10.019)
OP2: (-38.332,4.579,9.375)
C3': (-37.629,2.092,13.950)
C1': (-35.521,1.269,13.249)
C5': (-38.749,1.526,11.710)
O6: (-31.097,5.083,11.760)
O4': (-36.485,0.896,12.285)
C8: (-34.985,3.255,11.725)
C2: (-31.383,2.371,14.037)
C6: (-31.632,4.145,12.364)
C5: (-32.956,3.647,12.241)
C4: (-33.342,2.578,13.020)
P: (-39.013,3.340,9.826)
C4': (-37.819,1.099,12.815)
C2': (-36.273,1.683,14.515)
O2': (-36.433,0.531,15.331)
N1: (-30.903,3.428,13.307)
N2: (-30.523,1.810,14.898)
N3: (-32.614,1.899,13.931)
N7: (-34.002,4.063,11.429)
N9: (-34.656,2.334,12.689)
O5': (-38.293,2.740,11.113)
O3': (-38.676,2.017,14.901)
Image (generated by PyMOL):
PyMOL image
show in jmol