ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:11847:11846

Extra

PDB:
ATOM 1 O3' G A1846 9.551 28.507 59.597 1.00 40.78 O
ATOM 2 P U A1847 9.175 26.984 59.322 1.00 43.37 P
ATOM 3 OP1 U A1847 10.034 26.520 58.200 1.00 43.18 O
ATOM 4 OP2 U A1847 7.734 26.977 59.170 1.00 43.63 O
ATOM 5 O5' U A1847 9.554 26.194 60.653 1.00 43.06 O
ATOM 6 C5' U A1847 10.649 26.542 61.455 1.00 42.93 C
ATOM 7 C4' U A1847 10.444 26.041 62.846 1.00 42.80 C
ATOM 8 O4' U A1847 9.572 26.943 63.565 1.00 43.13 O
ATOM 9 C3' U A1847 9.760 24.691 62.953 1.00 42.61 C
ATOM 10 O3' U A1847 10.672 23.634 62.834 1.00 42.23 O
ATOM 11 C2' U A1847 9.101 24.754 64.321 1.00 42.70 C
ATOM 12 O2' U A1847 10.047 24.502 65.343 1.00 42.47 O
ATOM 13 C1' U A1847 8.715 26.211 64.410 1.00 43.09 C
ATOM 14 N1 U A1847 7.352 26.426 63.986 1.00 43.38 N
ATOM 15 C2 U A1847 6.401 26.247 64.955 1.00 43.49 C
ATOM 16 O2 U A1847 6.580 25.946 66.118 1.00 43.37 O
ATOM 17 N3 U A1847 5.155 26.440 64.499 1.00 43.77 N
ATOM 18 C4 U A1847 4.750 26.829 63.251 1.00 43.97 C
ATOM 19 O4 U A1847 3.547 27.047 63.123 1.00 44.25 O
ATOM 20 C5 U A1847 5.790 27.007 62.292 1.00 43.85 C
ATOM 21 C6 U A1847 7.036 26.795 62.696 1.00 43.56 C
ATOM 22 P C A1848 10.295 22.286 62.065 1.00 34.17 P
ATOM 23 OP1 C A1848 11.537 21.433 62.044 1.00 33.80 O
ATOM 24 OP2 C A1848 9.698 22.683 60.750 1.00 34.40 O
ATOM 25 O5' C A1848 9.219 21.614 63.046 1.00 34.18 O
TER

ATOM 1 O3' A B1845 3.925 29.819 57.910 1.00 39.17 O
ATOM 2 P G B1846 4.437 28.690 58.921 1.00 41.78 P
ATOM 3 OP1 G B1846 4.621 27.527 58.144 1.00 41.51 O
ATOM 4 OP2 G B1846 3.510 28.632 60.008 1.00 41.89 O
ATOM 5 O5' G B1846 5.830 29.235 59.455 1.00 41.62 O
ATOM 6 C5' G B1846 6.758 29.897 58.623 1.00 41.66 C
ATOM 7 C4' G B1846 7.946 30.374 59.423 1.00 41.53 C
ATOM 8 O4' G B1846 7.513 31.365 60.382 1.00 41.82 O
ATOM 9 C3' G B1846 8.651 29.332 60.298 1.00 41.10 C
ATOM 10 O3' G B1846 9.551 28.507 59.597 1.00 40.78 O
ATOM 11 C2' G B1846 9.342 30.192 61.317 1.00 41.16 C
ATOM 12 O2' G B1846 10.428 30.852 60.706 1.00 41.17 O
ATOM 13 C1' G B1846 8.251 31.207 61.595 1.00 41.60 C
ATOM 14 N9 G B1846 7.327 30.703 62.614 1.00 41.59 N
ATOM 15 C8 G B1846 6.008 30.654 62.322 1.00 41.83 C
ATOM 16 N7 G B1846 5.308 30.195 63.275 1.00 41.81 N
ATOM 17 C5 G B1846 6.218 29.880 64.230 1.00 41.54 C
ATOM 18 C6 G B1846 5.874 29.305 65.444 1.00 41.43 C
ATOM 19 O6 G B1846 4.665 29.030 65.723 1.00 41.58 O
ATOM 20 N1 G B1846 7.015 29.083 66.212 1.00 41.17 N
ATOM 21 C2 G B1846 8.333 29.435 65.819 1.00 41.03 C
ATOM 22 N2 G B1846 9.347 29.190 66.697 1.00 40.79 N
ATOM 23 N3 G B1846 8.620 29.989 64.635 1.00 41.14 N
ATOM 24 C4 G B1846 7.501 30.178 63.884 1.00 41.39 C
ATOM 25 P U B1847 9.175 26.984 59.322 1.00 43.37 P
ATOM 26 OP1 U B1847 10.034 26.520 58.200 1.00 43.18 O
ATOM 27 OP2 U B1847 7.734 26.977 59.170 1.00 43.63 O
ATOM 28 O5' U B1847 9.554 26.194 60.653 1.00 43.06 O
TER

Atoms:
C4: (4.750,26.829,63.251)
N3: (5.155,26.440,64.499)
OP1: (10.034,26.520,58.200)
OP2: (7.734,26.977,59.170)
C2: (6.401,26.247,64.955)
C1': (8.715,26.211,64.410)
C3': (9.760,24.691,62.953)
O5': (9.554,26.194,60.653)
O4': (9.572,26.943,63.565)
C5': (10.649,26.542,61.455)
P: (9.175,26.984,59.322)
C4': (10.444,26.041,62.846)
C2': (9.101,24.754,64.321)
O2': (10.047,24.502,65.343)
N1: (7.352,26.426,63.986)
O4: (3.547,27.047,63.123)
O2: (6.580,25.946,66.118)
C6: (7.036,26.795,62.696)
C5: (5.790,27.007,62.292)
O3': (10.672,23.634,62.834)
OP1: (4.621,27.527,58.144)
OP2: (3.510,28.632,60.008)
C3': (8.651,29.332,60.298)
C1': (8.251,31.207,61.595)
C5': (6.758,29.897,58.623)
O6: (4.665,29.030,65.723)
O4': (7.513,31.365,60.382)
C8: (6.008,30.654,62.322)
C2: (8.333,29.435,65.819)
C6: (5.874,29.305,65.444)
C5: (6.218,29.880,64.230)
C4: (7.501,30.178,63.884)
P: (4.437,28.690,58.921)
C4': (7.946,30.374,59.423)
C2': (9.342,30.192,61.317)
O2': (10.428,30.852,60.706)
N1: (7.015,29.083,66.212)
N2: (9.347,29.190,66.697)
N3: (8.620,29.989,64.635)
N7: (5.308,30.195,63.275)
N9: (7.327,30.703,62.614)
O5': (5.830,29.235,59.455)
O3': (9.551,28.507,59.597)
Image (generated by PyMOL):
PyMOL image
show in jmol