Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12369:12373
Extra
PDB:
ATOM 1 O3' C A2368 29.996 -23.837 59.446 1.00 39.89 O
ATOM 2 P U A2369 30.157 -22.299 59.106 1.00 43.71 P
ATOM 3 OP1 U A2369 31.266 -22.184 58.085 1.00 43.69 O
ATOM 4 OP2 U A2369 30.310 -21.595 60.402 1.00 43.58 O
ATOM 5 O5' U A2369 28.771 -21.923 58.440 1.00 43.80 O
ATOM 6 C5' U A2369 28.091 -22.806 57.575 1.00 43.97 C
ATOM 7 C4' U A2369 26.607 -22.472 57.477 1.00 44.05 C
ATOM 8 O4' U A2369 25.980 -22.538 58.782 1.00 44.02 O
ATOM 9 C3' U A2369 26.274 -21.088 56.929 1.00 44.01 C
ATOM 10 O3' U A2369 25.049 -21.163 56.213 1.00 44.16 O
ATOM 11 C2' U A2369 26.034 -20.304 58.193 1.00 43.88 C
ATOM 12 O2' U A2369 25.285 -19.128 58.017 1.00 43.88 O
ATOM 13 C1' U A2369 25.276 -21.332 58.998 1.00 43.97 C
ATOM 14 N1 U A2369 25.215 -21.050 60.426 1.00 43.88 N
ATOM 15 C2 U A2369 26.435 -21.192 61.106 1.00 43.76 C
ATOM 16 O2 U A2369 27.459 -21.544 60.553 1.00 43.74 O
ATOM 17 N3 U A2369 26.541 -20.984 62.454 1.00 43.69 N
ATOM 18 C4 U A2369 25.481 -20.587 63.134 1.00 43.71 C
ATOM 19 O4 U A2369 25.763 -20.427 64.310 1.00 43.65 O
ATOM 20 C5 U A2369 24.244 -20.445 62.352 1.00 43.83 C
ATOM 21 C6 U A2369 24.092 -20.677 61.052 1.00 43.91 C
ATOM 22 P G A2370 25.040 -21.383 54.635 1.00 39.68 P
ATOM 23 OP1 G A2370 23.628 -21.646 54.245 1.00 39.86 O
ATOM 24 OP2 G A2370 26.074 -22.414 54.326 1.00 39.70 O
ATOM 25 O5' G A2370 25.494 -19.978 54.065 1.00 39.59 O
TER
ATOM 1 O3' G B2372 24.002 -17.404 65.537 1.00 43.38 O
ATOM 2 P G B2373 22.910 -18.564 65.571 1.00 50.84 P
ATOM 3 OP1 G B2373 23.227 -19.419 66.706 1.00 50.85 O
ATOM 4 OP2 G B2373 22.860 -19.151 64.266 1.00 50.90 O
ATOM 5 O5' G B2373 21.577 -17.774 65.829 1.00 50.91 O
ATOM 6 C5' G B2373 21.118 -17.487 67.136 1.00 50.93 C
ATOM 7 C4' G B2373 19.737 -16.905 67.080 1.00 51.03 C
ATOM 8 O4' G B2373 19.742 -15.811 66.144 1.00 51.00 O
ATOM 9 C3' G B2373 18.669 -17.834 66.545 1.00 51.19 C
ATOM 10 O3' G B2373 18.134 -18.669 67.540 1.00 51.28 O
ATOM 11 C2' G B2373 17.654 -16.875 65.946 1.00 51.27 C
ATOM 12 O2' G B2373 16.893 -16.257 66.963 1.00 51.31 O
ATOM 13 C1' G B2373 18.567 -15.826 65.360 1.00 51.14 C
ATOM 14 N9 G B2373 18.925 -16.115 63.952 1.00 51.15 N
ATOM 15 C8 G B2373 20.129 -16.506 63.410 1.00 51.05 C
ATOM 16 N7 G B2373 20.103 -16.680 62.105 1.00 51.11 N
ATOM 17 C5 G B2373 18.783 -16.361 61.748 1.00 51.25 C
ATOM 18 C6 G B2373 18.128 -16.343 60.480 1.00 51.39 C
ATOM 19 O6 G B2373 18.623 -16.607 59.369 1.00 51.40 O
ATOM 20 N1 G B2373 16.801 -15.988 60.598 1.00 51.52 N
ATOM 21 C2 G B2373 16.218 -15.679 61.803 1.00 51.52 C
ATOM 22 N2 G B2373 14.909 -15.332 61.878 1.00 51.67 N
ATOM 23 N3 G B2373 16.829 -15.680 62.977 1.00 51.40 N
ATOM 24 C4 G B2373 18.089 -16.024 62.880 1.00 51.27 C
ATOM 25 P C B2374 17.881 -20.224 67.253 1.00 61.46 P
ATOM 26 OP1 C B2374 17.646 -20.844 68.562 1.00 61.51 O
ATOM 27 OP2 C B2374 19.006 -20.731 66.409 1.00 61.38 O
ATOM 28 O5' C B2374 16.539 -20.225 66.391 1.00 61.62 O
TER
ATOM 2 P U A2369 30.157 -22.299 59.106 1.00 43.71 P
ATOM 3 OP1 U A2369 31.266 -22.184 58.085 1.00 43.69 O
ATOM 4 OP2 U A2369 30.310 -21.595 60.402 1.00 43.58 O
ATOM 5 O5' U A2369 28.771 -21.923 58.440 1.00 43.80 O
ATOM 6 C5' U A2369 28.091 -22.806 57.575 1.00 43.97 C
ATOM 7 C4' U A2369 26.607 -22.472 57.477 1.00 44.05 C
ATOM 8 O4' U A2369 25.980 -22.538 58.782 1.00 44.02 O
ATOM 9 C3' U A2369 26.274 -21.088 56.929 1.00 44.01 C
ATOM 10 O3' U A2369 25.049 -21.163 56.213 1.00 44.16 O
ATOM 11 C2' U A2369 26.034 -20.304 58.193 1.00 43.88 C
ATOM 12 O2' U A2369 25.285 -19.128 58.017 1.00 43.88 O
ATOM 13 C1' U A2369 25.276 -21.332 58.998 1.00 43.97 C
ATOM 14 N1 U A2369 25.215 -21.050 60.426 1.00 43.88 N
ATOM 15 C2 U A2369 26.435 -21.192 61.106 1.00 43.76 C
ATOM 16 O2 U A2369 27.459 -21.544 60.553 1.00 43.74 O
ATOM 17 N3 U A2369 26.541 -20.984 62.454 1.00 43.69 N
ATOM 18 C4 U A2369 25.481 -20.587 63.134 1.00 43.71 C
ATOM 19 O4 U A2369 25.763 -20.427 64.310 1.00 43.65 O
ATOM 20 C5 U A2369 24.244 -20.445 62.352 1.00 43.83 C
ATOM 21 C6 U A2369 24.092 -20.677 61.052 1.00 43.91 C
ATOM 22 P G A2370 25.040 -21.383 54.635 1.00 39.68 P
ATOM 23 OP1 G A2370 23.628 -21.646 54.245 1.00 39.86 O
ATOM 24 OP2 G A2370 26.074 -22.414 54.326 1.00 39.70 O
ATOM 25 O5' G A2370 25.494 -19.978 54.065 1.00 39.59 O
TER
ATOM 1 O3' G B2372 24.002 -17.404 65.537 1.00 43.38 O
ATOM 2 P G B2373 22.910 -18.564 65.571 1.00 50.84 P
ATOM 3 OP1 G B2373 23.227 -19.419 66.706 1.00 50.85 O
ATOM 4 OP2 G B2373 22.860 -19.151 64.266 1.00 50.90 O
ATOM 5 O5' G B2373 21.577 -17.774 65.829 1.00 50.91 O
ATOM 6 C5' G B2373 21.118 -17.487 67.136 1.00 50.93 C
ATOM 7 C4' G B2373 19.737 -16.905 67.080 1.00 51.03 C
ATOM 8 O4' G B2373 19.742 -15.811 66.144 1.00 51.00 O
ATOM 9 C3' G B2373 18.669 -17.834 66.545 1.00 51.19 C
ATOM 10 O3' G B2373 18.134 -18.669 67.540 1.00 51.28 O
ATOM 11 C2' G B2373 17.654 -16.875 65.946 1.00 51.27 C
ATOM 12 O2' G B2373 16.893 -16.257 66.963 1.00 51.31 O
ATOM 13 C1' G B2373 18.567 -15.826 65.360 1.00 51.14 C
ATOM 14 N9 G B2373 18.925 -16.115 63.952 1.00 51.15 N
ATOM 15 C8 G B2373 20.129 -16.506 63.410 1.00 51.05 C
ATOM 16 N7 G B2373 20.103 -16.680 62.105 1.00 51.11 N
ATOM 17 C5 G B2373 18.783 -16.361 61.748 1.00 51.25 C
ATOM 18 C6 G B2373 18.128 -16.343 60.480 1.00 51.39 C
ATOM 19 O6 G B2373 18.623 -16.607 59.369 1.00 51.40 O
ATOM 20 N1 G B2373 16.801 -15.988 60.598 1.00 51.52 N
ATOM 21 C2 G B2373 16.218 -15.679 61.803 1.00 51.52 C
ATOM 22 N2 G B2373 14.909 -15.332 61.878 1.00 51.67 N
ATOM 23 N3 G B2373 16.829 -15.680 62.977 1.00 51.40 N
ATOM 24 C4 G B2373 18.089 -16.024 62.880 1.00 51.27 C
ATOM 25 P C B2374 17.881 -20.224 67.253 1.00 61.46 P
ATOM 26 OP1 C B2374 17.646 -20.844 68.562 1.00 61.51 O
ATOM 27 OP2 C B2374 19.006 -20.731 66.409 1.00 61.38 O
ATOM 28 O5' C B2374 16.539 -20.225 66.391 1.00 61.62 O
TER
Atoms:
C4: (25.481,-20.587,63.134)
N3: (26.541,-20.984,62.454)
OP1: (31.266,-22.184,58.085)
OP2: (30.310,-21.595,60.402)
C2: (26.435,-21.192,61.106)
C1': (25.276,-21.332,58.998)
C3': (26.274,-21.088,56.929)
O5': (28.771,-21.923,58.440)
O4': (25.980,-22.538,58.782)
C5': (28.091,-22.806,57.575)
P: (30.157,-22.299,59.106)
C4': (26.607,-22.472,57.477)
C2': (26.034,-20.304,58.193)
O2': (25.285,-19.128,58.017)
N1: (25.215,-21.050,60.426)
O4: (25.763,-20.427,64.310)
O2: (27.459,-21.544,60.553)
C6: (24.092,-20.677,61.052)
C5: (24.244,-20.445,62.352)
O3': (25.049,-21.163,56.213)
N3: (26.541,-20.984,62.454)
OP1: (31.266,-22.184,58.085)
OP2: (30.310,-21.595,60.402)
C2: (26.435,-21.192,61.106)
C1': (25.276,-21.332,58.998)
C3': (26.274,-21.088,56.929)
O5': (28.771,-21.923,58.440)
O4': (25.980,-22.538,58.782)
C5': (28.091,-22.806,57.575)
P: (30.157,-22.299,59.106)
C4': (26.607,-22.472,57.477)
C2': (26.034,-20.304,58.193)
O2': (25.285,-19.128,58.017)
N1: (25.215,-21.050,60.426)
O4: (25.763,-20.427,64.310)
O2: (27.459,-21.544,60.553)
C6: (24.092,-20.677,61.052)
C5: (24.244,-20.445,62.352)
O3': (25.049,-21.163,56.213)
OP1: (23.227,-19.419,66.706)
OP2: (22.860,-19.151,64.266)
C3': (18.669,-17.834,66.545)
C1': (18.567,-15.826,65.360)
C5': (21.118,-17.487,67.136)
O6: (18.623,-16.607,59.369)
O4': (19.742,-15.811,66.144)
C8: (20.129,-16.506,63.410)
C2: (16.218,-15.679,61.803)
C6: (18.128,-16.343,60.480)
C5: (18.783,-16.361,61.748)
C4: (18.089,-16.024,62.880)
P: (22.910,-18.564,65.571)
C4': (19.737,-16.905,67.080)
C2': (17.654,-16.875,65.946)
O2': (16.893,-16.257,66.963)
N1: (16.801,-15.988,60.598)
N2: (14.909,-15.332,61.878)
N3: (16.829,-15.680,62.977)
N7: (20.103,-16.680,62.105)
N9: (18.925,-16.115,63.952)
O5': (21.577,-17.774,65.829)
O3': (18.134,-18.669,67.540)
OP2: (22.860,-19.151,64.266)
C3': (18.669,-17.834,66.545)
C1': (18.567,-15.826,65.360)
C5': (21.118,-17.487,67.136)
O6: (18.623,-16.607,59.369)
O4': (19.742,-15.811,66.144)
C8: (20.129,-16.506,63.410)
C2: (16.218,-15.679,61.803)
C6: (18.128,-16.343,60.480)
C5: (18.783,-16.361,61.748)
C4: (18.089,-16.024,62.880)
P: (22.910,-18.564,65.571)
C4': (19.737,-16.905,67.080)
C2': (17.654,-16.875,65.946)
O2': (16.893,-16.257,66.963)
N1: (16.801,-15.988,60.598)
N2: (14.909,-15.332,61.878)
N3: (16.829,-15.680,62.977)
N7: (20.103,-16.680,62.105)
N9: (18.925,-16.115,63.952)
O5': (21.577,-17.774,65.829)
O3': (18.134,-18.669,67.540)
Image (generated by PyMOL):