Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12581:12580
Extra
PDB:
ATOM 1 O3' G A2580 14.581 -9.697 36.544 1.00 40.79 O
ATOM 2 P U A2581 13.280 -8.760 36.459 1.00 40.08 P
ATOM 3 OP1 U A2581 12.160 -9.640 36.149 1.00 40.32 O
ATOM 4 OP2 U A2581 13.633 -7.633 35.522 1.00 40.22 O
ATOM 5 O5' U A2581 13.137 -8.192 37.937 1.00 39.81 O
ATOM 6 C5' U A2581 11.981 -8.336 38.721 1.00 39.84 C
ATOM 7 C4' U A2581 12.058 -7.423 39.926 1.00 39.60 C
ATOM 8 O4' U A2581 13.416 -7.425 40.491 1.00 39.29 O
ATOM 9 C3' U A2581 11.797 -5.963 39.646 1.00 39.72 C
ATOM 10 O3' U A2581 10.434 -5.680 39.590 1.00 39.96 O
ATOM 11 C2' U A2581 12.537 -5.247 40.785 1.00 39.41 C
ATOM 12 O2' U A2581 11.784 -5.225 41.991 1.00 39.32 O
ATOM 13 C1' U A2581 13.752 -6.141 40.979 1.00 39.17 C
ATOM 14 N1 U A2581 14.876 -5.620 40.204 1.00 39.15 N
ATOM 15 C2 U A2581 15.505 -4.428 40.658 1.00 39.01 C
ATOM 16 O2 U A2581 15.254 -3.823 41.697 1.00 38.88 O
ATOM 17 N3 U A2581 16.498 -3.915 39.876 1.00 39.02 N
ATOM 18 C4 U A2581 16.890 -4.442 38.686 1.00 39.17 C
ATOM 19 O4 U A2581 17.801 -3.875 38.125 1.00 39.17 O
ATOM 20 C5 U A2581 16.191 -5.643 38.245 1.00 39.32 C
ATOM 21 C6 U A2581 15.222 -6.182 38.997 1.00 39.31 C
ATOM 22 P G A2582 9.831 -4.821 38.381 1.00 43.84 P
ATOM 23 OP1 G A2582 8.341 -5.080 38.374 1.00 44.09 O
ATOM 24 OP2 G A2582 10.614 -5.131 37.157 1.00 43.94 O
ATOM 25 O5' G A2582 10.164 -3.338 38.843 1.00 43.74 O
TER
ATOM 1 O3' U B2579 19.462 -6.125 35.965 1.00 47.71 O
ATOM 2 P G B2580 18.597 -6.979 34.883 1.00 40.57 P
ATOM 3 OP1 G B2580 19.541 -7.805 34.055 1.00 40.61 O
ATOM 4 OP2 G B2580 17.728 -6.009 34.188 1.00 40.84 O
ATOM 5 O5' G B2580 17.727 -7.932 35.806 1.00 40.49 O
ATOM 6 C5' G B2580 17.686 -9.334 35.599 1.00 40.54 C
ATOM 7 C4' G B2580 16.996 -10.017 36.752 1.00 40.40 C
ATOM 8 O4' G B2580 17.900 -10.102 37.906 1.00 40.05 O
ATOM 9 C3' G B2580 15.743 -9.306 37.274 1.00 40.47 C
ATOM 10 O3' G B2580 14.581 -9.697 36.544 1.00 40.79 O
ATOM 11 C2' G B2580 15.688 -9.739 38.720 1.00 40.20 C
ATOM 12 O2' G B2580 15.075 -11.016 38.792 1.00 40.28 O
ATOM 13 C1' G B2580 17.185 -9.871 39.098 1.00 39.92 C
ATOM 14 N9 G B2580 17.720 -8.627 39.716 1.00 39.73 N
ATOM 15 C8 G B2580 18.740 -7.867 39.181 1.00 39.70 C
ATOM 16 N7 G B2580 19.014 -6.800 39.864 1.00 39.55 N
ATOM 17 C5 G B2580 18.141 -6.850 40.924 1.00 39.47 C
ATOM 18 C6 G B2580 17.966 -5.968 41.993 1.00 39.33 C
ATOM 19 O6 G B2580 18.543 -4.947 42.295 1.00 39.22 O
ATOM 20 N1 G B2580 16.988 -6.339 42.852 1.00 39.31 N
ATOM 21 C2 G B2580 16.208 -7.449 42.754 1.00 39.42 C
ATOM 22 N2 G B2580 15.285 -7.595 43.752 1.00 39.39 N
ATOM 23 N3 G B2580 16.360 -8.306 41.737 1.00 39.56 N
ATOM 24 C4 G B2580 17.331 -7.947 40.860 1.00 39.58 C
ATOM 25 P U B2581 13.280 -8.760 36.459 1.00 40.08 P
ATOM 26 OP1 U B2581 12.160 -9.640 36.149 1.00 40.32 O
ATOM 27 OP2 U B2581 13.633 -7.633 35.522 1.00 40.22 O
ATOM 28 O5' U B2581 13.137 -8.192 37.937 1.00 39.81 O
TER
ATOM 2 P U A2581 13.280 -8.760 36.459 1.00 40.08 P
ATOM 3 OP1 U A2581 12.160 -9.640 36.149 1.00 40.32 O
ATOM 4 OP2 U A2581 13.633 -7.633 35.522 1.00 40.22 O
ATOM 5 O5' U A2581 13.137 -8.192 37.937 1.00 39.81 O
ATOM 6 C5' U A2581 11.981 -8.336 38.721 1.00 39.84 C
ATOM 7 C4' U A2581 12.058 -7.423 39.926 1.00 39.60 C
ATOM 8 O4' U A2581 13.416 -7.425 40.491 1.00 39.29 O
ATOM 9 C3' U A2581 11.797 -5.963 39.646 1.00 39.72 C
ATOM 10 O3' U A2581 10.434 -5.680 39.590 1.00 39.96 O
ATOM 11 C2' U A2581 12.537 -5.247 40.785 1.00 39.41 C
ATOM 12 O2' U A2581 11.784 -5.225 41.991 1.00 39.32 O
ATOM 13 C1' U A2581 13.752 -6.141 40.979 1.00 39.17 C
ATOM 14 N1 U A2581 14.876 -5.620 40.204 1.00 39.15 N
ATOM 15 C2 U A2581 15.505 -4.428 40.658 1.00 39.01 C
ATOM 16 O2 U A2581 15.254 -3.823 41.697 1.00 38.88 O
ATOM 17 N3 U A2581 16.498 -3.915 39.876 1.00 39.02 N
ATOM 18 C4 U A2581 16.890 -4.442 38.686 1.00 39.17 C
ATOM 19 O4 U A2581 17.801 -3.875 38.125 1.00 39.17 O
ATOM 20 C5 U A2581 16.191 -5.643 38.245 1.00 39.32 C
ATOM 21 C6 U A2581 15.222 -6.182 38.997 1.00 39.31 C
ATOM 22 P G A2582 9.831 -4.821 38.381 1.00 43.84 P
ATOM 23 OP1 G A2582 8.341 -5.080 38.374 1.00 44.09 O
ATOM 24 OP2 G A2582 10.614 -5.131 37.157 1.00 43.94 O
ATOM 25 O5' G A2582 10.164 -3.338 38.843 1.00 43.74 O
TER
ATOM 1 O3' U B2579 19.462 -6.125 35.965 1.00 47.71 O
ATOM 2 P G B2580 18.597 -6.979 34.883 1.00 40.57 P
ATOM 3 OP1 G B2580 19.541 -7.805 34.055 1.00 40.61 O
ATOM 4 OP2 G B2580 17.728 -6.009 34.188 1.00 40.84 O
ATOM 5 O5' G B2580 17.727 -7.932 35.806 1.00 40.49 O
ATOM 6 C5' G B2580 17.686 -9.334 35.599 1.00 40.54 C
ATOM 7 C4' G B2580 16.996 -10.017 36.752 1.00 40.40 C
ATOM 8 O4' G B2580 17.900 -10.102 37.906 1.00 40.05 O
ATOM 9 C3' G B2580 15.743 -9.306 37.274 1.00 40.47 C
ATOM 10 O3' G B2580 14.581 -9.697 36.544 1.00 40.79 O
ATOM 11 C2' G B2580 15.688 -9.739 38.720 1.00 40.20 C
ATOM 12 O2' G B2580 15.075 -11.016 38.792 1.00 40.28 O
ATOM 13 C1' G B2580 17.185 -9.871 39.098 1.00 39.92 C
ATOM 14 N9 G B2580 17.720 -8.627 39.716 1.00 39.73 N
ATOM 15 C8 G B2580 18.740 -7.867 39.181 1.00 39.70 C
ATOM 16 N7 G B2580 19.014 -6.800 39.864 1.00 39.55 N
ATOM 17 C5 G B2580 18.141 -6.850 40.924 1.00 39.47 C
ATOM 18 C6 G B2580 17.966 -5.968 41.993 1.00 39.33 C
ATOM 19 O6 G B2580 18.543 -4.947 42.295 1.00 39.22 O
ATOM 20 N1 G B2580 16.988 -6.339 42.852 1.00 39.31 N
ATOM 21 C2 G B2580 16.208 -7.449 42.754 1.00 39.42 C
ATOM 22 N2 G B2580 15.285 -7.595 43.752 1.00 39.39 N
ATOM 23 N3 G B2580 16.360 -8.306 41.737 1.00 39.56 N
ATOM 24 C4 G B2580 17.331 -7.947 40.860 1.00 39.58 C
ATOM 25 P U B2581 13.280 -8.760 36.459 1.00 40.08 P
ATOM 26 OP1 U B2581 12.160 -9.640 36.149 1.00 40.32 O
ATOM 27 OP2 U B2581 13.633 -7.633 35.522 1.00 40.22 O
ATOM 28 O5' U B2581 13.137 -8.192 37.937 1.00 39.81 O
TER
Atoms:
C4: (16.890,-4.442,38.686)
N3: (16.498,-3.915,39.876)
OP1: (12.160,-9.640,36.149)
OP2: (13.633,-7.633,35.522)
C2: (15.505,-4.428,40.658)
C1': (13.752,-6.141,40.979)
C3': (11.797,-5.963,39.646)
O5': (13.137,-8.192,37.937)
O4': (13.416,-7.425,40.491)
C5': (11.981,-8.336,38.721)
P: (13.280,-8.760,36.459)
C4': (12.058,-7.423,39.926)
C2': (12.537,-5.247,40.785)
O2': (11.784,-5.225,41.991)
N1: (14.876,-5.620,40.204)
O4: (17.801,-3.875,38.125)
O2: (15.254,-3.823,41.697)
C6: (15.222,-6.182,38.997)
C5: (16.191,-5.643,38.245)
O3': (10.434,-5.680,39.590)
N3: (16.498,-3.915,39.876)
OP1: (12.160,-9.640,36.149)
OP2: (13.633,-7.633,35.522)
C2: (15.505,-4.428,40.658)
C1': (13.752,-6.141,40.979)
C3': (11.797,-5.963,39.646)
O5': (13.137,-8.192,37.937)
O4': (13.416,-7.425,40.491)
C5': (11.981,-8.336,38.721)
P: (13.280,-8.760,36.459)
C4': (12.058,-7.423,39.926)
C2': (12.537,-5.247,40.785)
O2': (11.784,-5.225,41.991)
N1: (14.876,-5.620,40.204)
O4: (17.801,-3.875,38.125)
O2: (15.254,-3.823,41.697)
C6: (15.222,-6.182,38.997)
C5: (16.191,-5.643,38.245)
O3': (10.434,-5.680,39.590)
OP1: (19.541,-7.805,34.055)
OP2: (17.728,-6.009,34.188)
C3': (15.743,-9.306,37.274)
C1': (17.185,-9.871,39.098)
C5': (17.686,-9.334,35.599)
O6: (18.543,-4.947,42.295)
O4': (17.900,-10.102,37.906)
C8: (18.740,-7.867,39.181)
C2: (16.208,-7.449,42.754)
C6: (17.966,-5.968,41.993)
C5: (18.141,-6.850,40.924)
C4: (17.331,-7.947,40.860)
P: (18.597,-6.979,34.883)
C4': (16.996,-10.017,36.752)
C2': (15.688,-9.739,38.720)
O2': (15.075,-11.016,38.792)
N1: (16.988,-6.339,42.852)
N2: (15.285,-7.595,43.752)
N3: (16.360,-8.306,41.737)
N7: (19.014,-6.800,39.864)
N9: (17.720,-8.627,39.716)
O5': (17.727,-7.932,35.806)
O3': (14.581,-9.697,36.544)
OP2: (17.728,-6.009,34.188)
C3': (15.743,-9.306,37.274)
C1': (17.185,-9.871,39.098)
C5': (17.686,-9.334,35.599)
O6: (18.543,-4.947,42.295)
O4': (17.900,-10.102,37.906)
C8: (18.740,-7.867,39.181)
C2: (16.208,-7.449,42.754)
C6: (17.966,-5.968,41.993)
C5: (18.141,-6.850,40.924)
C4: (17.331,-7.947,40.860)
P: (18.597,-6.979,34.883)
C4': (16.996,-10.017,36.752)
C2': (15.688,-9.739,38.720)
O2': (15.075,-11.016,38.792)
N1: (16.988,-6.339,42.852)
N2: (15.285,-7.595,43.752)
N3: (16.360,-8.306,41.737)
N7: (19.014,-6.800,39.864)
N9: (17.720,-8.627,39.716)
O5': (17.727,-7.932,35.806)
O3': (14.581,-9.697,36.544)
Image (generated by PyMOL):