Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DLC:Y44:Y19
Extra
PDB:
ATOM 1 P U A 44 5.482 8.993 123.765 1.00 34.89 P
ATOM 2 OP1 U A 44 5.220 9.984 122.697 1.00 34.74 O
ATOM 3 OP2 U A 44 5.227 7.553 123.526 1.00 34.70 O
ATOM 4 O5' U A 44 6.986 9.158 124.291 1.00 34.74 O
ATOM 5 C5' U A 44 7.348 10.259 125.131 1.00 34.75 C
ATOM 6 C4' U A 44 7.250 9.905 126.608 1.00 34.87 C
ATOM 7 O4' U A 44 5.848 9.779 126.976 1.00 34.85 O
ATOM 8 C3' U A 44 7.944 8.601 127.018 1.00 35.13 C
ATOM 9 O3' U A 44 8.963 8.837 128.008 1.00 35.42 O
ATOM 10 C2' U A 44 6.814 7.731 127.567 1.00 34.90 C
ATOM 11 C1' U A 44 5.711 8.732 127.916 1.00 34.73 C
ATOM 12 N1 U A 44 4.312 8.136 127.889 1.00 34.33 N
ATOM 13 C2 U A 44 3.708 7.722 129.075 1.00 34.02 C
ATOM 14 O2 U A 44 4.226 7.808 130.178 1.00 33.75 O
ATOM 15 N3 U A 44 2.447 7.187 128.932 1.00 33.85 N
ATOM 16 C4 U A 44 1.735 7.026 127.753 1.00 33.87 C
ATOM 17 O4 U A 44 0.613 6.531 127.783 1.00 33.78 O
ATOM 18 C5 U A 44 2.420 7.474 126.564 1.00 33.92 C
ATOM 19 C6 U A 44 3.650 7.997 126.676 1.00 34.08 C
TER
ATOM 1 P A B 19 -0.418 4.469 123.171 1.00 35.48 P
ATOM 2 OP1 A B 19 0.477 5.242 124.066 1.00 35.20 O
ATOM 3 OP2 A B 19 -1.669 5.074 122.653 1.00 35.19 O
ATOM 4 O5' A B 19 -0.778 3.067 123.860 1.00 35.12 O
ATOM 5 C5' A B 19 -1.517 3.040 125.077 1.00 34.76 C
ATOM 6 C4' A B 19 -0.977 2.007 126.054 1.00 34.57 C
ATOM 7 O4' A B 19 0.426 1.722 125.817 1.00 34.32 O
ATOM 8 C3' A B 19 -1.018 2.433 127.514 1.00 34.54 C
ATOM 9 O3' A B 19 -2.308 2.212 128.048 1.00 34.84 O
ATOM 10 C2' A B 19 0.007 1.488 128.133 1.00 34.30 C
ATOM 11 O2' A B 19 -0.501 0.189 128.383 1.00 34.28 O
ATOM 12 C1' A B 19 1.083 1.452 127.047 1.00 33.92 C
ATOM 13 N9 A B 19 2.179 2.416 127.232 1.00 33.48 N
ATOM 14 C8 A B 19 2.826 3.110 126.244 1.00 33.31 C
ATOM 15 N7 A B 19 3.773 3.909 126.674 1.00 33.04 N
ATOM 16 C5 A B 19 3.756 3.733 128.046 1.00 33.18 C
ATOM 17 C6 A B 19 4.523 4.298 129.094 1.00 33.15 C
ATOM 18 N6 A B 19 5.498 5.187 128.900 1.00 32.89 N
ATOM 19 N1 A B 19 4.260 3.911 130.361 1.00 33.04 N
ATOM 20 C2 A B 19 3.288 3.015 130.562 1.00 33.17 C
ATOM 21 N3 A B 19 2.502 2.416 129.665 1.00 33.27 N
ATOM 22 C4 A B 19 2.783 2.816 128.409 1.00 33.24 C
ATOM 23 P A B 20 -3.110 3.384 128.789 1.00 35.22 P
ATOM 24 OP1 A B 20 -3.613 4.313 127.748 1.00 35.09 O
ATOM 25 OP2 A B 20 -2.290 3.895 129.912 1.00 34.59 O
ATOM 26 O5' A B 20 -4.351 2.594 129.417 1.00 34.88 O
TER
ATOM 2 OP1 U A 44 5.220 9.984 122.697 1.00 34.74 O
ATOM 3 OP2 U A 44 5.227 7.553 123.526 1.00 34.70 O
ATOM 4 O5' U A 44 6.986 9.158 124.291 1.00 34.74 O
ATOM 5 C5' U A 44 7.348 10.259 125.131 1.00 34.75 C
ATOM 6 C4' U A 44 7.250 9.905 126.608 1.00 34.87 C
ATOM 7 O4' U A 44 5.848 9.779 126.976 1.00 34.85 O
ATOM 8 C3' U A 44 7.944 8.601 127.018 1.00 35.13 C
ATOM 9 O3' U A 44 8.963 8.837 128.008 1.00 35.42 O
ATOM 10 C2' U A 44 6.814 7.731 127.567 1.00 34.90 C
ATOM 11 C1' U A 44 5.711 8.732 127.916 1.00 34.73 C
ATOM 12 N1 U A 44 4.312 8.136 127.889 1.00 34.33 N
ATOM 13 C2 U A 44 3.708 7.722 129.075 1.00 34.02 C
ATOM 14 O2 U A 44 4.226 7.808 130.178 1.00 33.75 O
ATOM 15 N3 U A 44 2.447 7.187 128.932 1.00 33.85 N
ATOM 16 C4 U A 44 1.735 7.026 127.753 1.00 33.87 C
ATOM 17 O4 U A 44 0.613 6.531 127.783 1.00 33.78 O
ATOM 18 C5 U A 44 2.420 7.474 126.564 1.00 33.92 C
ATOM 19 C6 U A 44 3.650 7.997 126.676 1.00 34.08 C
TER
ATOM 1 P A B 19 -0.418 4.469 123.171 1.00 35.48 P
ATOM 2 OP1 A B 19 0.477 5.242 124.066 1.00 35.20 O
ATOM 3 OP2 A B 19 -1.669 5.074 122.653 1.00 35.19 O
ATOM 4 O5' A B 19 -0.778 3.067 123.860 1.00 35.12 O
ATOM 5 C5' A B 19 -1.517 3.040 125.077 1.00 34.76 C
ATOM 6 C4' A B 19 -0.977 2.007 126.054 1.00 34.57 C
ATOM 7 O4' A B 19 0.426 1.722 125.817 1.00 34.32 O
ATOM 8 C3' A B 19 -1.018 2.433 127.514 1.00 34.54 C
ATOM 9 O3' A B 19 -2.308 2.212 128.048 1.00 34.84 O
ATOM 10 C2' A B 19 0.007 1.488 128.133 1.00 34.30 C
ATOM 11 O2' A B 19 -0.501 0.189 128.383 1.00 34.28 O
ATOM 12 C1' A B 19 1.083 1.452 127.047 1.00 33.92 C
ATOM 13 N9 A B 19 2.179 2.416 127.232 1.00 33.48 N
ATOM 14 C8 A B 19 2.826 3.110 126.244 1.00 33.31 C
ATOM 15 N7 A B 19 3.773 3.909 126.674 1.00 33.04 N
ATOM 16 C5 A B 19 3.756 3.733 128.046 1.00 33.18 C
ATOM 17 C6 A B 19 4.523 4.298 129.094 1.00 33.15 C
ATOM 18 N6 A B 19 5.498 5.187 128.900 1.00 32.89 N
ATOM 19 N1 A B 19 4.260 3.911 130.361 1.00 33.04 N
ATOM 20 C2 A B 19 3.288 3.015 130.562 1.00 33.17 C
ATOM 21 N3 A B 19 2.502 2.416 129.665 1.00 33.27 N
ATOM 22 C4 A B 19 2.783 2.816 128.409 1.00 33.24 C
ATOM 23 P A B 20 -3.110 3.384 128.789 1.00 35.22 P
ATOM 24 OP1 A B 20 -3.613 4.313 127.748 1.00 35.09 O
ATOM 25 OP2 A B 20 -2.290 3.895 129.912 1.00 34.59 O
ATOM 26 O5' A B 20 -4.351 2.594 129.417 1.00 34.88 O
TER
Atoms:
N3: (2.447,7.187,128.932)
OP1: (5.220,9.984,122.697)
OP2: (5.227,7.553,123.526)
C4: (1.735,7.026,127.753)
C1': (5.711,8.732,127.916)
C3': (7.944,8.601,127.018)
O5': (6.986,9.158,124.291)
O4': (5.848,9.779,126.976)
C5': (7.348,10.259,125.131)
P: (5.482,8.993,123.765)
C4': (7.250,9.905,126.608)
C2': (6.814,7.731,127.567)
N1: (4.312,8.136,127.889)
C2: (3.708,7.722,129.075)
O4: (0.613,6.531,127.783)
O2: (4.226,7.808,130.178)
C6: (3.650,7.997,126.676)
C5: (2.420,7.474,126.564)
O3': (8.963,8.837,128.008)
OP1: (5.220,9.984,122.697)
OP2: (5.227,7.553,123.526)
C4: (1.735,7.026,127.753)
C1': (5.711,8.732,127.916)
C3': (7.944,8.601,127.018)
O5': (6.986,9.158,124.291)
O4': (5.848,9.779,126.976)
C5': (7.348,10.259,125.131)
P: (5.482,8.993,123.765)
C4': (7.250,9.905,126.608)
C2': (6.814,7.731,127.567)
N1: (4.312,8.136,127.889)
C2: (3.708,7.722,129.075)
O4: (0.613,6.531,127.783)
O2: (4.226,7.808,130.178)
C6: (3.650,7.997,126.676)
C5: (2.420,7.474,126.564)
O3': (8.963,8.837,128.008)
OP1: (0.477,5.242,124.066)
OP2: (-1.669,5.074,122.653)
C3': (-1.018,2.433,127.514)
C1': (1.083,1.452,127.047)
C5': (-1.517,3.040,125.077)
O4': (0.426,1.722,125.817)
C8: (2.826,3.110,126.244)
O2': (-0.501,0.189,128.383)
C6: (4.523,4.298,129.094)
C5: (3.756,3.733,128.046)
C4: (2.783,2.816,128.409)
P: (-0.418,4.469,123.171)
C4': (-0.977,2.007,126.054)
C2': (0.007,1.488,128.133)
C2: (3.288,3.015,130.562)
N1: (4.260,3.911,130.361)
N3: (2.502,2.416,129.665)
N6: (5.498,5.187,128.900)
N7: (3.773,3.909,126.674)
N9: (2.179,2.416,127.232)
O5': (-0.778,3.067,123.860)
O3': (-2.308,2.212,128.048)
OP2: (-1.669,5.074,122.653)
C3': (-1.018,2.433,127.514)
C1': (1.083,1.452,127.047)
C5': (-1.517,3.040,125.077)
O4': (0.426,1.722,125.817)
C8: (2.826,3.110,126.244)
O2': (-0.501,0.189,128.383)
C6: (4.523,4.298,129.094)
C5: (3.756,3.733,128.046)
C4: (2.783,2.816,128.409)
P: (-0.418,4.469,123.171)
C4': (-0.977,2.007,126.054)
C2': (0.007,1.488,128.133)
C2: (3.288,3.015,130.562)
N1: (4.260,3.911,130.361)
N3: (2.502,2.416,129.665)
N6: (5.498,5.187,128.900)
N7: (3.773,3.909,126.674)
N9: (2.179,2.416,127.232)
O5': (-0.778,3.067,123.860)
O3': (-2.308,2.212,128.048)
Image (generated by PyMOL):