Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01084:01083
Extra
PDB:
ATOM 1 O3' A A1083 38.373 94.965 119.081 1.00 41.00 O
ATOM 2 P U A1084 39.760 95.751 118.937 1.00 40.93 P
ATOM 3 OP1 U A1084 40.750 95.110 119.840 1.00 39.93 O
ATOM 4 OP2 U A1084 39.470 97.193 119.073 1.00 40.54 O
ATOM 5 O5' U A1084 40.175 95.482 117.428 1.00 40.63 O
ATOM 6 C5' U A1084 40.233 94.140 116.924 1.00 42.01 C
ATOM 7 C4' U A1084 40.203 94.151 115.423 1.00 42.95 C
ATOM 8 O4' U A1084 38.950 94.705 114.969 1.00 42.87 O
ATOM 9 C3' U A1084 41.262 95.024 114.781 1.00 43.93 C
ATOM 10 O3' U A1084 42.461 94.270 114.657 1.00 46.07 O
ATOM 11 C2' U A1084 40.649 95.334 113.424 1.00 43.66 C
ATOM 12 O2' U A1084 40.827 94.272 112.508 1.00 46.32 O
ATOM 13 C1' U A1084 39.160 95.423 113.772 1.00 42.87 C
ATOM 14 N1 U A1084 38.621 96.777 113.942 1.00 42.18 N
ATOM 15 C2 U A1084 38.184 97.444 112.815 1.00 42.74 C
ATOM 16 O2 U A1084 38.256 96.972 111.694 1.00 45.11 O
ATOM 17 N3 U A1084 37.654 98.686 113.046 1.00 42.61 N
ATOM 18 C4 U A1084 37.520 99.313 114.261 1.00 43.84 C
ATOM 19 O4 U A1084 36.944 100.400 114.325 1.00 45.13 O
ATOM 20 C5 U A1084 38.015 98.565 115.370 1.00 44.53 C
ATOM 21 C6 U A1084 38.537 97.354 115.176 1.00 42.49 C
ATOM 22 P C A1085 43.837 94.856 115.229 1.00 48.35 P
ATOM 23 OP1 C A1085 44.888 93.900 114.788 1.00 46.08 O
ATOM 24 OP2 C A1085 43.679 95.157 116.677 1.00 46.82 O
ATOM 25 O5' C A1085 44.010 96.231 114.443 1.00 47.24 O
TER
ATOM 1 O3' A B1082 36.268 100.431 120.677 1.00 52.06 O
ATOM 2 P A B1083 35.204 99.650 119.756 1.00 54.19 P
ATOM 3 OP1 A B1083 35.652 99.828 118.345 1.00 52.47 O
ATOM 4 OP2 A B1083 33.818 100.045 120.144 1.00 55.75 O
ATOM 5 O5' A B1083 35.388 98.125 120.169 1.00 50.38 O
ATOM 6 C5' A B1083 36.575 97.423 119.820 1.00 45.07 C
ATOM 7 C4' A B1083 36.242 96.018 119.415 1.00 41.79 C
ATOM 8 O4' A B1083 34.966 95.987 118.734 1.00 41.70 O
ATOM 9 C3' A B1083 37.230 95.461 118.421 1.00 41.03 C
ATOM 10 O3' A B1083 38.373 94.965 119.081 1.00 41.00 O
ATOM 11 C2' A B1083 36.399 94.436 117.670 1.00 40.94 C
ATOM 12 O2' A B1083 36.226 93.239 118.395 1.00 40.63 O
ATOM 13 C1' A B1083 35.060 95.170 117.579 1.00 41.43 C
ATOM 14 N9 A B1083 34.917 96.048 116.411 1.00 40.49 N
ATOM 15 C8 A B1083 34.582 97.382 116.427 1.00 40.29 C
ATOM 16 N7 A B1083 34.480 97.917 115.239 1.00 39.97 N
ATOM 17 C5 A B1083 34.775 96.873 114.379 1.00 38.93 C
ATOM 18 C6 A B1083 34.832 96.797 112.984 1.00 38.39 C
ATOM 19 N6 A B1083 34.559 97.823 112.181 1.00 36.41 N
ATOM 20 N1 A B1083 35.176 95.614 112.433 1.00 38.75 N
ATOM 21 C2 A B1083 35.435 94.582 113.243 1.00 39.29 C
ATOM 22 N3 A B1083 35.404 94.527 114.573 1.00 40.26 N
ATOM 23 C4 A B1083 35.063 95.719 115.086 1.00 39.32 C
ATOM 24 P U B1084 39.760 95.751 118.937 1.00 40.93 P
ATOM 25 OP1 U B1084 40.750 95.110 119.840 1.00 39.93 O
ATOM 26 OP2 U B1084 39.470 97.193 119.073 1.00 40.54 O
ATOM 27 O5' U B1084 40.175 95.482 117.428 1.00 40.63 O
TER
ATOM 2 P U A1084 39.760 95.751 118.937 1.00 40.93 P
ATOM 3 OP1 U A1084 40.750 95.110 119.840 1.00 39.93 O
ATOM 4 OP2 U A1084 39.470 97.193 119.073 1.00 40.54 O
ATOM 5 O5' U A1084 40.175 95.482 117.428 1.00 40.63 O
ATOM 6 C5' U A1084 40.233 94.140 116.924 1.00 42.01 C
ATOM 7 C4' U A1084 40.203 94.151 115.423 1.00 42.95 C
ATOM 8 O4' U A1084 38.950 94.705 114.969 1.00 42.87 O
ATOM 9 C3' U A1084 41.262 95.024 114.781 1.00 43.93 C
ATOM 10 O3' U A1084 42.461 94.270 114.657 1.00 46.07 O
ATOM 11 C2' U A1084 40.649 95.334 113.424 1.00 43.66 C
ATOM 12 O2' U A1084 40.827 94.272 112.508 1.00 46.32 O
ATOM 13 C1' U A1084 39.160 95.423 113.772 1.00 42.87 C
ATOM 14 N1 U A1084 38.621 96.777 113.942 1.00 42.18 N
ATOM 15 C2 U A1084 38.184 97.444 112.815 1.00 42.74 C
ATOM 16 O2 U A1084 38.256 96.972 111.694 1.00 45.11 O
ATOM 17 N3 U A1084 37.654 98.686 113.046 1.00 42.61 N
ATOM 18 C4 U A1084 37.520 99.313 114.261 1.00 43.84 C
ATOM 19 O4 U A1084 36.944 100.400 114.325 1.00 45.13 O
ATOM 20 C5 U A1084 38.015 98.565 115.370 1.00 44.53 C
ATOM 21 C6 U A1084 38.537 97.354 115.176 1.00 42.49 C
ATOM 22 P C A1085 43.837 94.856 115.229 1.00 48.35 P
ATOM 23 OP1 C A1085 44.888 93.900 114.788 1.00 46.08 O
ATOM 24 OP2 C A1085 43.679 95.157 116.677 1.00 46.82 O
ATOM 25 O5' C A1085 44.010 96.231 114.443 1.00 47.24 O
TER
ATOM 1 O3' A B1082 36.268 100.431 120.677 1.00 52.06 O
ATOM 2 P A B1083 35.204 99.650 119.756 1.00 54.19 P
ATOM 3 OP1 A B1083 35.652 99.828 118.345 1.00 52.47 O
ATOM 4 OP2 A B1083 33.818 100.045 120.144 1.00 55.75 O
ATOM 5 O5' A B1083 35.388 98.125 120.169 1.00 50.38 O
ATOM 6 C5' A B1083 36.575 97.423 119.820 1.00 45.07 C
ATOM 7 C4' A B1083 36.242 96.018 119.415 1.00 41.79 C
ATOM 8 O4' A B1083 34.966 95.987 118.734 1.00 41.70 O
ATOM 9 C3' A B1083 37.230 95.461 118.421 1.00 41.03 C
ATOM 10 O3' A B1083 38.373 94.965 119.081 1.00 41.00 O
ATOM 11 C2' A B1083 36.399 94.436 117.670 1.00 40.94 C
ATOM 12 O2' A B1083 36.226 93.239 118.395 1.00 40.63 O
ATOM 13 C1' A B1083 35.060 95.170 117.579 1.00 41.43 C
ATOM 14 N9 A B1083 34.917 96.048 116.411 1.00 40.49 N
ATOM 15 C8 A B1083 34.582 97.382 116.427 1.00 40.29 C
ATOM 16 N7 A B1083 34.480 97.917 115.239 1.00 39.97 N
ATOM 17 C5 A B1083 34.775 96.873 114.379 1.00 38.93 C
ATOM 18 C6 A B1083 34.832 96.797 112.984 1.00 38.39 C
ATOM 19 N6 A B1083 34.559 97.823 112.181 1.00 36.41 N
ATOM 20 N1 A B1083 35.176 95.614 112.433 1.00 38.75 N
ATOM 21 C2 A B1083 35.435 94.582 113.243 1.00 39.29 C
ATOM 22 N3 A B1083 35.404 94.527 114.573 1.00 40.26 N
ATOM 23 C4 A B1083 35.063 95.719 115.086 1.00 39.32 C
ATOM 24 P U B1084 39.760 95.751 118.937 1.00 40.93 P
ATOM 25 OP1 U B1084 40.750 95.110 119.840 1.00 39.93 O
ATOM 26 OP2 U B1084 39.470 97.193 119.073 1.00 40.54 O
ATOM 27 O5' U B1084 40.175 95.482 117.428 1.00 40.63 O
TER
Atoms:
C4: (37.520,99.313,114.261)
N3: (37.654,98.686,113.046)
OP1: (40.750,95.110,119.840)
OP2: (39.470,97.193,119.073)
C2: (38.184,97.444,112.815)
C1': (39.160,95.423,113.772)
C3': (41.262,95.024,114.781)
O5': (40.175,95.482,117.428)
O4': (38.950,94.705,114.969)
C5': (40.233,94.140,116.924)
P: (39.760,95.751,118.937)
C4': (40.203,94.151,115.423)
C2': (40.649,95.334,113.424)
O2': (40.827,94.272,112.508)
N1: (38.621,96.777,113.942)
O4: (36.944,100.400,114.325)
O2: (38.256,96.972,111.694)
C6: (38.537,97.354,115.176)
C5: (38.015,98.565,115.370)
O3': (42.461,94.270,114.657)
N3: (37.654,98.686,113.046)
OP1: (40.750,95.110,119.840)
OP2: (39.470,97.193,119.073)
C2: (38.184,97.444,112.815)
C1': (39.160,95.423,113.772)
C3': (41.262,95.024,114.781)
O5': (40.175,95.482,117.428)
O4': (38.950,94.705,114.969)
C5': (40.233,94.140,116.924)
P: (39.760,95.751,118.937)
C4': (40.203,94.151,115.423)
C2': (40.649,95.334,113.424)
O2': (40.827,94.272,112.508)
N1: (38.621,96.777,113.942)
O4: (36.944,100.400,114.325)
O2: (38.256,96.972,111.694)
C6: (38.537,97.354,115.176)
C5: (38.015,98.565,115.370)
O3': (42.461,94.270,114.657)
OP1: (35.652,99.828,118.345)
OP2: (33.818,100.045,120.144)
C3': (37.230,95.461,118.421)
C1': (35.060,95.170,117.579)
C5': (36.575,97.423,119.820)
O4': (34.966,95.987,118.734)
C8: (34.582,97.382,116.427)
O2': (36.226,93.239,118.395)
C6: (34.832,96.797,112.984)
C5: (34.775,96.873,114.379)
C4: (35.063,95.719,115.086)
P: (35.204,99.650,119.756)
C4': (36.242,96.018,119.415)
C2': (36.399,94.436,117.670)
C2: (35.435,94.582,113.243)
N1: (35.176,95.614,112.433)
N3: (35.404,94.527,114.573)
N6: (34.559,97.823,112.181)
N7: (34.480,97.917,115.239)
N9: (34.917,96.048,116.411)
O5': (35.388,98.125,120.169)
O3': (38.373,94.965,119.081)
OP2: (33.818,100.045,120.144)
C3': (37.230,95.461,118.421)
C1': (35.060,95.170,117.579)
C5': (36.575,97.423,119.820)
O4': (34.966,95.987,118.734)
C8: (34.582,97.382,116.427)
O2': (36.226,93.239,118.395)
C6: (34.832,96.797,112.984)
C5: (34.775,96.873,114.379)
C4: (35.063,95.719,115.086)
P: (35.204,99.650,119.756)
C4': (36.242,96.018,119.415)
C2': (36.399,94.436,117.670)
C2: (35.435,94.582,113.243)
N1: (35.176,95.614,112.433)
N3: (35.404,94.527,114.573)
N6: (34.559,97.823,112.181)
N7: (34.480,97.917,115.239)
N9: (34.917,96.048,116.411)
O5': (35.388,98.125,120.169)
O3': (38.373,94.965,119.081)
Image (generated by PyMOL):