ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1307:A1306

Extra

PDB:
ATOM 1 O3' A A1306 -30.684 -79.710 -5.684 1.00 54.47 O
ATOM 2 P U A1307 -30.084 -79.321 -4.264 1.00 53.01 P
ATOM 3 OP1 U A1307 -28.614 -79.475 -4.331 1.00 56.75 O
ATOM 4 OP2 U A1307 -30.876 -80.001 -3.204 1.00 61.45 O
ATOM 5 O5' U A1307 -30.399 -77.755 -4.191 1.00 79.38 O
ATOM 6 C5' U A1307 -29.981 -77.000 -3.060 1.00 72.30 C
ATOM 7 C4' U A1307 -31.163 -76.569 -2.210 1.00 57.85 C
ATOM 8 O4' U A1307 -32.395 -77.159 -2.703 1.00 54.10 O
ATOM 9 C3' U A1307 -31.035 -76.987 -0.748 1.00 55.77 C
ATOM 10 O3' U A1307 -31.024 -75.874 0.138 1.00 55.43 O
ATOM 11 C2' U A1307 -32.286 -77.810 -0.505 1.00 50.41 C
ATOM 12 O2' U A1307 -32.807 -77.532 0.774 1.00 47.24 O
ATOM 13 C1' U A1307 -33.226 -77.285 -1.577 1.00 53.55 C
ATOM 14 N1 U A1307 -34.355 -78.216 -1.804 1.00 53.95 N
ATOM 15 C2 U A1307 -35.635 -77.809 -1.501 1.00 57.37 C
ATOM 16 O2 U A1307 -35.896 -76.700 -1.078 1.00 66.83 O
ATOM 17 N3 U A1307 -36.615 -78.738 -1.717 1.00 55.93 N
ATOM 18 C4 U A1307 -36.448 -80.017 -2.193 1.00 64.01 C
ATOM 19 O4 U A1307 -37.429 -80.745 -2.334 1.00 74.63 O
ATOM 20 C5 U A1307 -35.082 -80.373 -2.481 1.00 72.16 C
ATOM 21 C6 U A1307 -34.107 -79.481 -2.275 1.00 67.08 C
ATOM 22 P C A1308 -29.836 -74.802 0.156 1.00 43.99 P
ATOM 23 OP1 C A1308 -30.237 -73.709 1.073 1.00 57.86 O
ATOM 24 OP2 C A1308 -29.479 -74.504 -1.255 1.00 39.14 O
ATOM 25 O5' C A1308 -28.619 -75.578 0.853 1.00 62.25 O
TER

ATOM 1 O3' A B1305 -31.904 -83.315 -4.595 1.00 65.02 O
ATOM 2 P A B1306 -33.286 -83.702 -5.313 1.00 58.23 P
ATOM 3 OP1 A B1306 -34.332 -83.767 -4.274 1.00 54.82 O
ATOM 4 OP2 A B1306 -33.075 -84.820 -6.267 1.00 65.26 O
ATOM 5 O5' A B1306 -33.500 -82.411 -6.221 1.00 61.53 O
ATOM 6 C5' A B1306 -32.472 -82.018 -7.129 1.00 60.61 C
ATOM 7 C4' A B1306 -32.343 -80.504 -7.141 1.00 66.61 C
ATOM 8 O4' A B1306 -33.578 -79.900 -7.610 1.00 60.09 O
ATOM 9 C3' A B1306 -32.064 -79.900 -5.776 1.00 59.62 C
ATOM 10 O3' A B1306 -30.684 -79.710 -5.684 1.00 54.47 O
ATOM 11 C2' A B1306 -32.779 -78.558 -5.815 1.00 61.43 C
ATOM 12 O2' A B1306 -31.949 -77.559 -6.377 1.00 54.59 O
ATOM 13 C1' A B1306 -33.951 -78.840 -6.754 1.00 62.07 C
ATOM 14 N9 A B1306 -35.232 -79.199 -6.149 1.00 56.90 N
ATOM 15 C8 A B1306 -35.835 -80.421 -6.112 1.00 61.98 C
ATOM 16 N7 A B1306 -37.005 -80.422 -5.519 1.00 58.27 N
ATOM 17 C5 A B1306 -37.182 -79.106 -5.146 1.00 62.03 C
ATOM 18 C6 A B1306 -38.219 -78.437 -4.474 1.00 64.77 C
ATOM 19 N6 A B1306 -39.325 -79.040 -4.042 1.00 57.12 N
ATOM 20 N1 A B1306 -38.076 -77.118 -4.254 1.00 64.15 N
ATOM 21 C2 A B1306 -36.966 -76.515 -4.690 1.00 68.96 C
ATOM 22 N3 A B1306 -35.922 -77.034 -5.336 1.00 62.69 N
ATOM 23 C4 A B1306 -36.100 -78.345 -5.531 1.00 58.25 C
ATOM 24 P U B1307 -30.084 -79.321 -4.264 1.00 53.01 P
ATOM 25 OP1 U B1307 -28.614 -79.475 -4.331 1.00 56.75 O
ATOM 26 OP2 U B1307 -30.876 -80.001 -3.204 1.00 61.45 O
ATOM 27 O5' U B1307 -30.399 -77.755 -4.191 1.00 79.38 O
TER

Atoms:
C4: (-36.448,-80.017,-2.193)
N3: (-36.615,-78.738,-1.717)
OP1: (-28.614,-79.475,-4.331)
OP2: (-30.876,-80.001,-3.204)
C2: (-35.635,-77.809,-1.501)
C1': (-33.226,-77.285,-1.577)
C3': (-31.035,-76.987,-0.748)
O5': (-30.399,-77.755,-4.191)
O4': (-32.395,-77.159,-2.703)
C5': (-29.981,-77.000,-3.060)
P: (-30.084,-79.321,-4.264)
C4': (-31.163,-76.569,-2.210)
C2': (-32.286,-77.810,-0.505)
O2': (-32.807,-77.532,0.774)
N1: (-34.355,-78.216,-1.804)
O4: (-37.429,-80.745,-2.334)
O2: (-35.896,-76.700,-1.078)
C6: (-34.107,-79.481,-2.275)
C5: (-35.082,-80.373,-2.481)
O3': (-31.024,-75.874,0.138)
OP1: (-34.332,-83.767,-4.274)
OP2: (-33.075,-84.820,-6.267)
C3': (-32.064,-79.900,-5.776)
C1': (-33.951,-78.840,-6.754)
C5': (-32.472,-82.018,-7.129)
O4': (-33.578,-79.900,-7.610)
C8: (-35.835,-80.421,-6.112)
O2': (-31.949,-77.559,-6.377)
C6: (-38.219,-78.437,-4.474)
C5: (-37.182,-79.106,-5.146)
C4: (-36.100,-78.345,-5.531)
P: (-33.286,-83.702,-5.313)
C4': (-32.343,-80.504,-7.141)
C2': (-32.779,-78.558,-5.815)
C2: (-36.966,-76.515,-4.690)
N1: (-38.076,-77.118,-4.254)
N3: (-35.922,-77.034,-5.336)
N6: (-39.325,-79.040,-4.042)
N7: (-37.005,-80.422,-5.519)
N9: (-35.232,-79.199,-6.149)
O5': (-33.500,-82.411,-6.221)
O3': (-30.684,-79.710,-5.684)
Image (generated by PyMOL):
PyMOL image
show in jmol