ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2251:2250

Extra

PDB:
ATOM 1 O3' A A 250 -58.103 91.600 88.079 1.00 88.69 O
ATOM 2 P U A 251 -56.925 92.656 87.850 1.00 77.88 P
ATOM 3 OP1 U A 251 -56.942 93.024 86.412 1.00 78.10 O
ATOM 4 OP2 U A 251 -55.682 92.062 88.428 1.00 76.93 O
ATOM 5 O5' U A 251 -57.395 93.891 88.736 1.00 79.00 O
ATOM 6 C5' U A 251 -58.280 94.864 88.211 1.00 80.10 C
ATOM 7 C4' U A 251 -58.676 95.864 89.260 1.00 81.07 C
ATOM 8 O4' U A 251 -59.059 95.164 90.467 1.00 80.82 O
ATOM 9 C3' U A 251 -57.576 96.800 89.727 1.00 81.25 C
ATOM 10 O3' U A 251 -57.352 97.879 88.853 1.00 81.90 O
ATOM 11 C2' U A 251 -58.061 97.221 91.094 1.00 81.89 C
ATOM 12 O2' U A 251 -59.096 98.175 90.972 1.00 83.11 O
ATOM 13 C1' U A 251 -58.663 95.911 91.598 1.00 81.26 C
ATOM 14 N1 U A 251 -57.679 95.131 92.337 1.00 80.30 N
ATOM 15 C2 U A 251 -57.470 95.502 93.639 1.00 80.61 C
ATOM 16 O2 U A 251 -58.064 96.395 94.182 1.00 81.60 O
ATOM 17 N3 U A 251 -56.514 94.776 94.286 1.00 79.73 N
ATOM 18 C4 U A 251 -55.758 93.747 93.758 1.00 78.59 C
ATOM 19 O4 U A 251 -54.936 93.192 94.491 1.00 77.94 O
ATOM 20 C5 U A 251 -56.033 93.428 92.386 1.00 78.34 C
ATOM 21 C6 U A 251 -56.963 94.123 91.731 1.00 79.18 C
ATOM 22 P A A 252 -55.887 98.517 88.760 1.00 85.61 P
ATOM 23 OP1 A A 252 -55.916 99.517 87.657 1.00 86.34 O
ATOM 24 OP2 A A 252 -54.922 97.393 88.679 1.00 84.32 O
ATOM 25 O5' A A 252 -55.746 99.253 90.158 1.00 86.19 O
TER

ATOM 1 O3' C B 249 -55.642 87.543 91.947 1.00 82.98 O
ATOM 2 P A B 250 -55.131 88.973 91.409 1.00 85.82 P
ATOM 3 OP1 A B 250 -54.243 88.706 90.267 1.00 85.17 O
ATOM 4 OP2 A B 250 -54.583 89.717 92.569 1.00 86.19 O
ATOM 5 O5' A B 250 -56.469 89.654 90.889 1.00 86.81 O
ATOM 6 C5' A B 250 -57.208 89.059 89.832 1.00 86.68 C
ATOM 7 C4' A B 250 -58.534 89.747 89.609 1.00 87.74 C
ATOM 8 O4' A B 250 -59.379 89.601 90.780 1.00 88.14 O
ATOM 9 C3' A B 250 -58.482 91.245 89.392 1.00 88.70 C
ATOM 10 O3' A B 250 -58.103 91.600 88.079 1.00 88.69 O
ATOM 11 C2' A B 250 -59.895 91.673 89.767 1.00 89.71 C
ATOM 12 O2' A B 250 -60.817 91.330 88.745 1.00 89.89 O
ATOM 13 C1' A B 250 -60.158 90.766 90.956 1.00 89.32 C
ATOM 14 N9 A B 250 -59.760 91.401 92.211 1.00 89.66 N
ATOM 15 C8 A B 250 -58.583 91.263 92.887 1.00 89.06 C
ATOM 16 N7 A B 250 -58.519 91.965 93.980 1.00 89.63 N
ATOM 17 C5 A B 250 -59.742 92.606 94.010 1.00 90.67 C
ATOM 18 C6 A B 250 -60.298 93.499 94.936 1.00 91.68 C
ATOM 19 N6 A B 250 -59.627 93.882 96.023 1.00 91.77 N
ATOM 20 N1 A B 250 -61.548 93.978 94.693 1.00 92.62 N
ATOM 21 C2 A B 250 -62.176 93.556 93.577 1.00 92.52 C
ATOM 22 N3 A B 250 -61.759 92.705 92.631 1.00 91.61 N
ATOM 23 C4 A B 250 -60.518 92.275 92.919 1.00 90.70 C
ATOM 24 P U B 251 -56.925 92.656 87.850 1.00 77.88 P
ATOM 25 OP1 U B 251 -56.942 93.024 86.412 1.00 78.10 O
ATOM 26 OP2 U B 251 -55.682 92.062 88.428 1.00 76.93 O
ATOM 27 O5' U B 251 -57.395 93.891 88.736 1.00 79.00 O
TER

Atoms:
C4: (-55.758,93.747,93.758)
N3: (-56.514,94.776,94.286)
OP1: (-56.942,93.024,86.412)
OP2: (-55.682,92.062,88.428)
C2: (-57.470,95.502,93.639)
C1': (-58.663,95.911,91.598)
C3': (-57.576,96.800,89.727)
O5': (-57.395,93.891,88.736)
O4': (-59.059,95.164,90.467)
C5': (-58.280,94.864,88.211)
P: (-56.925,92.656,87.850)
C4': (-58.676,95.864,89.260)
C2': (-58.061,97.221,91.094)
O2': (-59.096,98.175,90.972)
N1: (-57.679,95.131,92.337)
O4: (-54.936,93.192,94.491)
O2: (-58.064,96.395,94.182)
C6: (-56.963,94.123,91.731)
C5: (-56.033,93.428,92.386)
O3': (-57.352,97.879,88.853)
OP1: (-54.243,88.706,90.267)
OP2: (-54.583,89.717,92.569)
C3': (-58.482,91.245,89.392)
C1': (-60.158,90.766,90.956)
C5': (-57.208,89.059,89.832)
O4': (-59.379,89.601,90.780)
C8: (-58.583,91.263,92.887)
O2': (-60.817,91.330,88.745)
C6: (-60.298,93.499,94.936)
C5: (-59.742,92.606,94.010)
C4: (-60.518,92.275,92.919)
P: (-55.131,88.973,91.409)
C4': (-58.534,89.747,89.609)
C2': (-59.895,91.673,89.767)
C2: (-62.176,93.556,93.577)
N1: (-61.548,93.978,94.693)
N3: (-61.759,92.705,92.631)
N6: (-59.627,93.882,96.023)
N7: (-58.519,91.965,93.980)
N9: (-59.760,91.401,92.211)
O5': (-56.469,89.654,90.889)
O3': (-58.103,91.600,88.079)
Image (generated by PyMOL):
PyMOL image
show in jmol