Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1P79:A1:A2
Extra
PDB:
ATOM 1 O3' G A 0 1.829 7.236 14.669 1.00 5.28 O
ATOM 2 P U A 1 3.414 7.131 14.824 1.00 5.36 P
ATOM 3 OP1 U A 1 3.711 5.689 14.792 1.00 6.61 O
ATOM 4 OP2 U A 1 3.919 7.970 15.944 1.00 6.71 O
ATOM 5 O5' U A 1 3.973 7.862 13.540 1.00 4.94 O
ATOM 6 C5' U A 1 3.675 7.380 12.213 1.00 4.90 C
ATOM 7 C4' U A 1 3.906 8.497 11.235 1.00 4.62 C
ATOM 8 O4' U A 1 5.312 8.776 11.170 1.00 5.20 O
ATOM 9 C3' U A 1 3.525 8.148 9.815 1.00 4.70 C
ATOM 10 O3' U A 1 2.132 8.362 9.630 1.00 4.88 O
ATOM 11 C2' U A 1 4.418 9.106 9.015 1.00 4.62 C
ATOM 12 O2' U A 1 3.817 10.374 8.852 1.00 4.25 O
ATOM 13 C1' U A 1 5.626 9.325 9.890 1.00 4.84 C
ATOM 14 N1 U A 1 6.896 8.727 9.439 1.00 5.12 N
ATOM 15 C2 U A 1 6.947 7.380 9.109 1.00 5.35 C
ATOM 16 O2 U A 1 5.972 6.644 9.177 1.00 6.57 O
ATOM 17 N3 U A 1 8.169 6.922 8.731 1.00 5.98 N
ATOM 18 C4 U A 1 9.339 7.646 8.652 1.00 6.19 C
ATOM 19 O4 U A 1 10.378 7.075 8.323 1.00 7.69 O
ATOM 20 C5 U A 1 9.217 9.035 9.012 1.00 5.59 C
ATOM 21 C6 U A 1 8.029 9.506 9.379 1.00 5.10 C
ATOM 22 P G A 2 1.482 8.083 8.194 1.00 4.25 P
ATOM 23 OP1 G A 2 1.868 6.716 7.765 1.00 5.35 O
ATOM 24 OP2 G A 2 1.777 9.222 7.289 1.00 4.52 O
ATOM 25 O5' G A 2 -0.052 8.170 8.577 1.00 5.19 O
TER
ATOM 1 O3' U B 1 2.132 8.362 9.630 1.00 4.88 O
ATOM 2 P G B 2 1.482 8.083 8.194 1.00 4.25 P
ATOM 3 OP1 G B 2 1.868 6.716 7.765 1.00 5.35 O
ATOM 4 OP2 G B 2 1.777 9.222 7.289 1.00 4.52 O
ATOM 5 O5' G B 2 -0.052 8.170 8.577 1.00 5.19 O
ATOM 6 C5' G B 2 -0.664 7.137 9.335 1.00 4.80 C
ATOM 7 C4' G B 2 -1.968 7.666 9.888 1.00 4.22 C
ATOM 8 O4' G B 2 -1.709 8.671 10.880 1.00 4.23 O
ATOM 9 C3' G B 2 -2.843 8.364 8.845 1.00 4.24 C
ATOM 10 O3' G B 2 -3.678 7.428 8.189 1.00 5.20 O
ATOM 11 C2' G B 2 -3.606 9.404 9.642 1.00 4.19 C
ATOM 12 O2' G B 2 -4.714 8.834 10.326 1.00 5.21 O
ATOM 13 C1' G B 2 -2.546 9.782 10.631 1.00 4.47 C
ATOM 14 N9 G B 2 -1.707 10.942 10.367 1.00 3.48 N
ATOM 15 C8 G B 2 -0.329 10.987 10.393 1.00 4.20 C
ATOM 16 N7 G B 2 0.156 12.196 10.333 1.00 3.57 N
ATOM 17 C5 G B 2 -0.980 13.000 10.309 1.00 3.14 C
ATOM 18 C6 G B 2 -1.107 14.391 10.311 1.00 3.07 C
ATOM 19 O6 G B 2 -0.176 15.242 10.318 1.00 3.07 O
ATOM 20 N1 G B 2 -2.418 14.834 10.319 1.00 3.00 N
ATOM 21 C2 G B 2 -3.503 13.987 10.320 1.00 3.02 C
ATOM 22 N2 G B 2 -4.710 14.576 10.267 1.00 3.38 N
ATOM 23 N3 G B 2 -3.401 12.672 10.343 1.00 3.56 N
ATOM 24 C4 G B 2 -2.124 12.240 10.354 1.00 3.03 C
ATOM 25 P G B 3 -3.567 7.195 6.624 1.00 5.32 P
ATOM 26 OP1 G B 3 -4.275 5.925 6.364 1.00 6.13 O
ATOM 27 OP2 G B 3 -2.178 7.359 6.179 1.00 6.45 O
ATOM 28 O5' G B 3 -4.394 8.402 6.000 1.00 5.18 O
TER
ATOM 2 P U A 1 3.414 7.131 14.824 1.00 5.36 P
ATOM 3 OP1 U A 1 3.711 5.689 14.792 1.00 6.61 O
ATOM 4 OP2 U A 1 3.919 7.970 15.944 1.00 6.71 O
ATOM 5 O5' U A 1 3.973 7.862 13.540 1.00 4.94 O
ATOM 6 C5' U A 1 3.675 7.380 12.213 1.00 4.90 C
ATOM 7 C4' U A 1 3.906 8.497 11.235 1.00 4.62 C
ATOM 8 O4' U A 1 5.312 8.776 11.170 1.00 5.20 O
ATOM 9 C3' U A 1 3.525 8.148 9.815 1.00 4.70 C
ATOM 10 O3' U A 1 2.132 8.362 9.630 1.00 4.88 O
ATOM 11 C2' U A 1 4.418 9.106 9.015 1.00 4.62 C
ATOM 12 O2' U A 1 3.817 10.374 8.852 1.00 4.25 O
ATOM 13 C1' U A 1 5.626 9.325 9.890 1.00 4.84 C
ATOM 14 N1 U A 1 6.896 8.727 9.439 1.00 5.12 N
ATOM 15 C2 U A 1 6.947 7.380 9.109 1.00 5.35 C
ATOM 16 O2 U A 1 5.972 6.644 9.177 1.00 6.57 O
ATOM 17 N3 U A 1 8.169 6.922 8.731 1.00 5.98 N
ATOM 18 C4 U A 1 9.339 7.646 8.652 1.00 6.19 C
ATOM 19 O4 U A 1 10.378 7.075 8.323 1.00 7.69 O
ATOM 20 C5 U A 1 9.217 9.035 9.012 1.00 5.59 C
ATOM 21 C6 U A 1 8.029 9.506 9.379 1.00 5.10 C
ATOM 22 P G A 2 1.482 8.083 8.194 1.00 4.25 P
ATOM 23 OP1 G A 2 1.868 6.716 7.765 1.00 5.35 O
ATOM 24 OP2 G A 2 1.777 9.222 7.289 1.00 4.52 O
ATOM 25 O5' G A 2 -0.052 8.170 8.577 1.00 5.19 O
TER
ATOM 1 O3' U B 1 2.132 8.362 9.630 1.00 4.88 O
ATOM 2 P G B 2 1.482 8.083 8.194 1.00 4.25 P
ATOM 3 OP1 G B 2 1.868 6.716 7.765 1.00 5.35 O
ATOM 4 OP2 G B 2 1.777 9.222 7.289 1.00 4.52 O
ATOM 5 O5' G B 2 -0.052 8.170 8.577 1.00 5.19 O
ATOM 6 C5' G B 2 -0.664 7.137 9.335 1.00 4.80 C
ATOM 7 C4' G B 2 -1.968 7.666 9.888 1.00 4.22 C
ATOM 8 O4' G B 2 -1.709 8.671 10.880 1.00 4.23 O
ATOM 9 C3' G B 2 -2.843 8.364 8.845 1.00 4.24 C
ATOM 10 O3' G B 2 -3.678 7.428 8.189 1.00 5.20 O
ATOM 11 C2' G B 2 -3.606 9.404 9.642 1.00 4.19 C
ATOM 12 O2' G B 2 -4.714 8.834 10.326 1.00 5.21 O
ATOM 13 C1' G B 2 -2.546 9.782 10.631 1.00 4.47 C
ATOM 14 N9 G B 2 -1.707 10.942 10.367 1.00 3.48 N
ATOM 15 C8 G B 2 -0.329 10.987 10.393 1.00 4.20 C
ATOM 16 N7 G B 2 0.156 12.196 10.333 1.00 3.57 N
ATOM 17 C5 G B 2 -0.980 13.000 10.309 1.00 3.14 C
ATOM 18 C6 G B 2 -1.107 14.391 10.311 1.00 3.07 C
ATOM 19 O6 G B 2 -0.176 15.242 10.318 1.00 3.07 O
ATOM 20 N1 G B 2 -2.418 14.834 10.319 1.00 3.00 N
ATOM 21 C2 G B 2 -3.503 13.987 10.320 1.00 3.02 C
ATOM 22 N2 G B 2 -4.710 14.576 10.267 1.00 3.38 N
ATOM 23 N3 G B 2 -3.401 12.672 10.343 1.00 3.56 N
ATOM 24 C4 G B 2 -2.124 12.240 10.354 1.00 3.03 C
ATOM 25 P G B 3 -3.567 7.195 6.624 1.00 5.32 P
ATOM 26 OP1 G B 3 -4.275 5.925 6.364 1.00 6.13 O
ATOM 27 OP2 G B 3 -2.178 7.359 6.179 1.00 6.45 O
ATOM 28 O5' G B 3 -4.394 8.402 6.000 1.00 5.18 O
TER
Atoms:
C4: (9.339,7.646,8.652)
N3: (8.169,6.922,8.731)
OP1: (3.711,5.689,14.792)
OP2: (3.919,7.970,15.944)
C2: (6.947,7.380,9.109)
C1': (5.626,9.325,9.890)
C3': (3.525,8.148,9.815)
O5': (3.973,7.862,13.540)
O4': (5.312,8.776,11.170)
C5': (3.675,7.380,12.213)
P: (3.414,7.131,14.824)
C4': (3.906,8.497,11.235)
C2': (4.418,9.106,9.015)
O2': (3.817,10.374,8.852)
N1: (6.896,8.727,9.439)
O4: (10.378,7.075,8.323)
O2: (5.972,6.644,9.177)
C6: (8.029,9.506,9.379)
C5: (9.217,9.035,9.012)
O3': (2.132,8.362,9.630)
N3: (8.169,6.922,8.731)
OP1: (3.711,5.689,14.792)
OP2: (3.919,7.970,15.944)
C2: (6.947,7.380,9.109)
C1': (5.626,9.325,9.890)
C3': (3.525,8.148,9.815)
O5': (3.973,7.862,13.540)
O4': (5.312,8.776,11.170)
C5': (3.675,7.380,12.213)
P: (3.414,7.131,14.824)
C4': (3.906,8.497,11.235)
C2': (4.418,9.106,9.015)
O2': (3.817,10.374,8.852)
N1: (6.896,8.727,9.439)
O4: (10.378,7.075,8.323)
O2: (5.972,6.644,9.177)
C6: (8.029,9.506,9.379)
C5: (9.217,9.035,9.012)
O3': (2.132,8.362,9.630)
OP1: (1.868,6.716,7.765)
OP2: (1.777,9.222,7.289)
C3': (-2.843,8.364,8.845)
C1': (-2.546,9.782,10.631)
C5': (-0.664,7.137,9.335)
O6: (-0.176,15.242,10.318)
O4': (-1.709,8.671,10.880)
C8: (-0.329,10.987,10.393)
C2: (-3.503,13.987,10.320)
C6: (-1.107,14.391,10.311)
C5: (-0.980,13.000,10.309)
C4: (-2.124,12.240,10.354)
P: (1.482,8.083,8.194)
C4': (-1.968,7.666,9.888)
C2': (-3.606,9.404,9.642)
O2': (-4.714,8.834,10.326)
N1: (-2.418,14.834,10.319)
N2: (-4.710,14.576,10.267)
N3: (-3.401,12.672,10.343)
N7: (0.156,12.196,10.333)
N9: (-1.707,10.942,10.367)
O5': (-0.052,8.170,8.577)
O3': (-3.678,7.428,8.189)
OP2: (1.777,9.222,7.289)
C3': (-2.843,8.364,8.845)
C1': (-2.546,9.782,10.631)
C5': (-0.664,7.137,9.335)
O6: (-0.176,15.242,10.318)
O4': (-1.709,8.671,10.880)
C8: (-0.329,10.987,10.393)
C2: (-3.503,13.987,10.320)
C6: (-1.107,14.391,10.311)
C5: (-0.980,13.000,10.309)
C4: (-2.124,12.240,10.354)
P: (1.482,8.083,8.194)
C4': (-1.968,7.666,9.888)
C2': (-3.606,9.404,9.642)
O2': (-4.714,8.834,10.326)
N1: (-2.418,14.834,10.319)
N2: (-4.710,14.576,10.267)
N3: (-3.401,12.672,10.343)
N7: (0.156,12.196,10.333)
N9: (-1.707,10.942,10.367)
O5': (-0.052,8.170,8.577)
O3': (-3.678,7.428,8.189)
Image (generated by PyMOL):