ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2D2L:D6:D5

Extra

PDB:
ATOM 1 O3' G A 5 26.168 4.078 43.572 1.00 65.49 O
ATOM 2 P U A 6 24.708 4.121 44.216 1.00 72.23 P
ATOM 3 OP1 U A 6 24.767 3.150 45.339 1.00 67.48 O
ATOM 4 OP2 U A 6 23.677 3.975 43.149 1.00 65.04 O
ATOM 5 O5' U A 6 24.591 5.570 44.860 1.00 74.30 O
ATOM 6 C5' U A 6 23.599 5.829 45.843 1.00 79.40 C
ATOM 7 C4' U A 6 24.088 6.851 46.833 1.00 82.55 C
ATOM 8 O4' U A 6 25.239 6.327 47.548 1.00 87.41 O
ATOM 9 C3' U A 6 24.614 8.053 46.054 1.00 82.87 C
ATOM 10 O3' U A 6 24.124 9.274 46.528 1.00 78.33 O
ATOM 11 C2' U A 6 26.130 7.918 45.990 1.00 86.06 C
ATOM 12 O2' U A 6 26.916 9.092 46.132 1.00 86.72 O
ATOM 13 C1' U A 6 26.370 7.113 47.245 1.00 90.92 C
ATOM 14 N1 U A 6 27.608 6.347 47.269 1.00 97.00 N
ATOM 15 C2 U A 6 28.523 6.735 48.229 1.00 99.61 C
ATOM 16 O2 U A 6 28.293 7.624 49.047 1.00101.71 O
ATOM 17 N3 U A 6 29.707 6.057 48.199 1.00100.86 N
ATOM 18 C4 U A 6 30.056 5.051 47.328 1.00100.84 C
ATOM 19 O4 U A 6 31.187 4.573 47.395 1.00102.46 O
ATOM 20 C5 U A 6 29.038 4.691 46.374 1.00 99.10 C
ATOM 21 C6 U A 6 27.873 5.337 46.383 1.00 97.62 C
ATOM 22 P A A 7 23.840 10.443 45.498 1.00 80.73 P
ATOM 23 OP1 A A 7 23.908 11.703 46.274 1.00 82.36 O
ATOM 24 OP2 A A 7 22.592 10.060 44.790 1.00 79.87 O
ATOM 25 O5' A A 7 25.061 10.381 44.475 1.00 76.81 O
TER

ATOM 1 O3' G B 4 28.416 2.926 37.674 1.00 50.77 O
ATOM 2 P G B 5 27.285 4.058 37.794 1.00 61.23 P
ATOM 3 OP1 G B 5 26.044 3.503 37.206 1.00 60.08 O
ATOM 4 OP2 G B 5 27.842 5.329 37.263 1.00 60.70 O
ATOM 5 O5' G B 5 27.072 4.199 39.365 1.00 57.89 O
ATOM 6 C5' G B 5 26.971 3.039 40.186 1.00 57.77 C
ATOM 7 C4' G B 5 27.329 3.373 41.616 1.00 60.14 C
ATOM 8 O4' G B 5 28.641 3.970 41.656 1.00 61.41 O
ATOM 9 C3' G B 5 26.375 4.410 42.203 1.00 61.92 C
ATOM 10 O3' G B 5 26.168 4.078 43.572 1.00 65.49 O
ATOM 11 C2' G B 5 27.074 5.750 42.013 1.00 60.25 C
ATOM 12 O2' G B 5 26.885 6.650 43.071 1.00 66.23 O
ATOM 13 C1' G B 5 28.530 5.310 42.047 1.00 57.96 C
ATOM 14 N9 G B 5 29.561 6.099 41.400 1.00 53.94 N
ATOM 15 C8 G B 5 29.605 6.581 40.121 1.00 54.50 C
ATOM 16 N7 G B 5 30.698 7.257 39.873 1.00 52.87 N
ATOM 17 C5 G B 5 31.403 7.215 41.065 1.00 49.85 C
ATOM 18 C6 G B 5 32.674 7.775 41.425 1.00 49.58 C
ATOM 19 O6 G B 5 33.445 8.457 40.728 1.00 48.95 O
ATOM 20 N1 G B 5 33.014 7.474 42.740 1.00 49.74 N
ATOM 21 C2 G B 5 32.239 6.737 43.606 1.00 52.04 C
ATOM 22 N2 G B 5 32.739 6.546 44.837 1.00 53.18 N
ATOM 23 N3 G B 5 31.061 6.221 43.289 1.00 48.67 N
ATOM 24 C4 G B 5 30.716 6.499 42.019 1.00 50.62 C
ATOM 25 P U B 6 24.708 4.121 44.216 1.00 72.23 P
ATOM 26 OP1 U B 6 24.767 3.150 45.339 1.00 67.48 O
ATOM 27 OP2 U B 6 23.677 3.975 43.149 1.00 65.04 O
ATOM 28 O5' U B 6 24.591 5.570 44.860 1.00 74.30 O
TER

Atoms:
C4: (30.056,5.051,47.328)
N3: (29.707,6.057,48.199)
OP1: (24.767,3.150,45.339)
OP2: (23.677,3.975,43.149)
C2: (28.523,6.735,48.229)
C1': (26.370,7.113,47.245)
C3': (24.614,8.053,46.054)
O5': (24.591,5.570,44.860)
O4': (25.239,6.327,47.548)
C5': (23.599,5.829,45.843)
P: (24.708,4.121,44.216)
C4': (24.088,6.851,46.833)
C2': (26.130,7.918,45.990)
O2': (26.916,9.092,46.132)
N1: (27.608,6.347,47.269)
O4: (31.187,4.573,47.395)
O2: (28.293,7.624,49.047)
C6: (27.873,5.337,46.383)
C5: (29.038,4.691,46.374)
O3': (24.124,9.274,46.528)
OP1: (26.044,3.503,37.206)
OP2: (27.842,5.329,37.263)
C3': (26.375,4.410,42.203)
C1': (28.530,5.310,42.047)
C5': (26.971,3.039,40.186)
O6: (33.445,8.457,40.728)
O4': (28.641,3.970,41.656)
C8: (29.605,6.581,40.121)
C2: (32.239,6.737,43.606)
C6: (32.674,7.775,41.425)
C5: (31.403,7.215,41.065)
C4: (30.716,6.499,42.019)
P: (27.285,4.058,37.794)
C4': (27.329,3.373,41.616)
C2': (27.074,5.750,42.013)
O2': (26.885,6.650,43.071)
N1: (33.014,7.474,42.740)
N2: (32.739,6.546,44.837)
N3: (31.061,6.221,43.289)
N7: (30.698,7.257,39.873)
N9: (29.561,6.099,41.400)
O5': (27.072,4.199,39.365)
O3': (26.168,4.078,43.572)
Image (generated by PyMOL):
PyMOL image
show in jmol