Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A503:A506
Extra
PDB:
ATOM 1 O3' G A 502 33.479 149.509 63.152 1.00 73.98 O
ATOM 2 P C A 503 32.207 149.475 64.134 1.00 69.47 P
ATOM 3 OP1 C A 503 32.540 150.341 65.291 1.00 68.88 O
ATOM 4 OP2 C A 503 31.774 148.060 64.359 1.00 66.93 O
ATOM 5 O5' C A 503 31.087 150.253 63.314 1.00 67.67 O
ATOM 6 C5' C A 503 30.402 149.647 62.197 1.00 63.08 C
ATOM 7 C4' C A 503 29.076 150.343 61.975 1.00 59.56 C
ATOM 8 O4' C A 503 29.308 151.695 61.520 1.00 58.09 O
ATOM 9 C3' C A 503 28.160 149.752 60.920 1.00 57.17 C
ATOM 10 O3' C A 503 27.404 148.702 61.512 1.00 55.74 O
ATOM 11 C2' C A 503 27.261 150.941 60.591 1.00 56.75 C
ATOM 12 O2' C A 503 26.314 151.223 61.610 1.00 57.38 O
ATOM 13 C1' C A 503 28.263 152.087 60.642 1.00 56.99 C
ATOM 14 N1 C A 503 28.859 152.458 59.348 1.00 55.89 N
ATOM 15 C2 C A 503 28.318 153.530 58.631 1.00 55.26 C
ATOM 16 O2 C A 503 27.278 154.064 59.030 1.00 54.71 O
ATOM 17 N3 C A 503 28.941 153.953 57.514 1.00 55.86 N
ATOM 18 C4 C A 503 30.045 153.335 57.087 1.00 56.17 C
ATOM 19 N4 C A 503 30.659 153.825 56.006 1.00 54.54 N
ATOM 20 C5 C A 503 30.577 152.197 57.756 1.00 56.31 C
ATOM 21 C6 C A 503 29.955 151.794 58.872 1.00 56.72 C
ATOM 22 P A A 504 27.711 147.157 61.160 1.00 53.50 P
ATOM 23 OP1 A A 504 27.055 146.429 62.274 1.00 53.24 O
ATOM 24 OP2 A A 504 29.147 146.905 60.877 1.00 54.03 O
ATOM 25 O5' A A 504 26.879 146.879 59.831 1.00 50.80 O
TER
ATOM 1 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 2 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 3 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 4 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 5 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
ATOM 6 C5' G B 506 22.736 140.319 67.367 1.00 40.48 C
ATOM 7 C4' G B 506 24.131 140.335 67.932 1.00 40.36 C
ATOM 8 O4' G B 506 25.058 140.920 66.971 1.00 39.72 O
ATOM 9 C3' G B 506 24.294 141.137 69.219 1.00 39.24 C
ATOM 10 O3' G B 506 25.160 140.434 70.066 1.00 38.79 O
ATOM 11 C2' G B 506 25.027 142.381 68.747 1.00 39.15 C
ATOM 12 O2' G B 506 25.816 143.001 69.739 1.00 36.47 O
ATOM 13 C1' G B 506 25.918 141.780 67.669 1.00 39.66 C
ATOM 14 N9 G B 506 26.480 142.777 66.768 1.00 40.93 N
ATOM 15 C8 G B 506 25.918 143.963 66.371 1.00 41.45 C
ATOM 16 N7 G B 506 26.742 144.719 65.701 1.00 42.23 N
ATOM 17 C5 G B 506 27.903 143.965 65.617 1.00 42.94 C
ATOM 18 C6 G B 506 29.164 144.269 65.039 1.00 42.52 C
ATOM 19 O6 G B 506 29.515 145.302 64.463 1.00 42.92 O
ATOM 20 N1 G B 506 30.068 143.214 65.192 1.00 42.27 N
ATOM 21 C2 G B 506 29.795 142.024 65.820 1.00 42.68 C
ATOM 22 N2 G B 506 30.789 141.135 65.872 1.00 42.59 N
ATOM 23 N3 G B 506 28.628 141.732 66.361 1.00 43.60 N
ATOM 24 C4 G B 506 27.737 142.744 66.231 1.00 42.56 C
ATOM 25 P A B 507 24.920 140.471 71.639 1.00 38.79 P
ATOM 26 OP1 A B 507 23.468 140.550 71.911 1.00 38.99 O
ATOM 27 OP2 A B 507 25.824 141.489 72.224 1.00 38.51 O
ATOM 28 O5' A B 507 25.315 138.992 72.032 1.00 38.14 O
TER
ATOM 2 P C A 503 32.207 149.475 64.134 1.00 69.47 P
ATOM 3 OP1 C A 503 32.540 150.341 65.291 1.00 68.88 O
ATOM 4 OP2 C A 503 31.774 148.060 64.359 1.00 66.93 O
ATOM 5 O5' C A 503 31.087 150.253 63.314 1.00 67.67 O
ATOM 6 C5' C A 503 30.402 149.647 62.197 1.00 63.08 C
ATOM 7 C4' C A 503 29.076 150.343 61.975 1.00 59.56 C
ATOM 8 O4' C A 503 29.308 151.695 61.520 1.00 58.09 O
ATOM 9 C3' C A 503 28.160 149.752 60.920 1.00 57.17 C
ATOM 10 O3' C A 503 27.404 148.702 61.512 1.00 55.74 O
ATOM 11 C2' C A 503 27.261 150.941 60.591 1.00 56.75 C
ATOM 12 O2' C A 503 26.314 151.223 61.610 1.00 57.38 O
ATOM 13 C1' C A 503 28.263 152.087 60.642 1.00 56.99 C
ATOM 14 N1 C A 503 28.859 152.458 59.348 1.00 55.89 N
ATOM 15 C2 C A 503 28.318 153.530 58.631 1.00 55.26 C
ATOM 16 O2 C A 503 27.278 154.064 59.030 1.00 54.71 O
ATOM 17 N3 C A 503 28.941 153.953 57.514 1.00 55.86 N
ATOM 18 C4 C A 503 30.045 153.335 57.087 1.00 56.17 C
ATOM 19 N4 C A 503 30.659 153.825 56.006 1.00 54.54 N
ATOM 20 C5 C A 503 30.577 152.197 57.756 1.00 56.31 C
ATOM 21 C6 C A 503 29.955 151.794 58.872 1.00 56.72 C
ATOM 22 P A A 504 27.711 147.157 61.160 1.00 53.50 P
ATOM 23 OP1 A A 504 27.055 146.429 62.274 1.00 53.24 O
ATOM 24 OP2 A A 504 29.147 146.905 60.877 1.00 54.03 O
ATOM 25 O5' A A 504 26.879 146.879 59.831 1.00 50.80 O
TER
ATOM 1 O3' U B 505 21.198 141.228 64.962 1.00 42.47 O
ATOM 2 P G B 506 20.918 141.929 66.367 1.00 43.69 P
ATOM 3 OP1 G B 506 19.762 141.169 66.917 1.00 42.86 O
ATOM 4 OP2 G B 506 20.806 143.390 66.170 1.00 43.54 O
ATOM 5 O5' G B 506 22.237 141.650 67.215 1.00 41.47 O
ATOM 6 C5' G B 506 22.736 140.319 67.367 1.00 40.48 C
ATOM 7 C4' G B 506 24.131 140.335 67.932 1.00 40.36 C
ATOM 8 O4' G B 506 25.058 140.920 66.971 1.00 39.72 O
ATOM 9 C3' G B 506 24.294 141.137 69.219 1.00 39.24 C
ATOM 10 O3' G B 506 25.160 140.434 70.066 1.00 38.79 O
ATOM 11 C2' G B 506 25.027 142.381 68.747 1.00 39.15 C
ATOM 12 O2' G B 506 25.816 143.001 69.739 1.00 36.47 O
ATOM 13 C1' G B 506 25.918 141.780 67.669 1.00 39.66 C
ATOM 14 N9 G B 506 26.480 142.777 66.768 1.00 40.93 N
ATOM 15 C8 G B 506 25.918 143.963 66.371 1.00 41.45 C
ATOM 16 N7 G B 506 26.742 144.719 65.701 1.00 42.23 N
ATOM 17 C5 G B 506 27.903 143.965 65.617 1.00 42.94 C
ATOM 18 C6 G B 506 29.164 144.269 65.039 1.00 42.52 C
ATOM 19 O6 G B 506 29.515 145.302 64.463 1.00 42.92 O
ATOM 20 N1 G B 506 30.068 143.214 65.192 1.00 42.27 N
ATOM 21 C2 G B 506 29.795 142.024 65.820 1.00 42.68 C
ATOM 22 N2 G B 506 30.789 141.135 65.872 1.00 42.59 N
ATOM 23 N3 G B 506 28.628 141.732 66.361 1.00 43.60 N
ATOM 24 C4 G B 506 27.737 142.744 66.231 1.00 42.56 C
ATOM 25 P A B 507 24.920 140.471 71.639 1.00 38.79 P
ATOM 26 OP1 A B 507 23.468 140.550 71.911 1.00 38.99 O
ATOM 27 OP2 A B 507 25.824 141.489 72.224 1.00 38.51 O
ATOM 28 O5' A B 507 25.315 138.992 72.032 1.00 38.14 O
TER
Atoms:
C2: (28.318,153.530,58.631)
OP1: (32.540,150.341,65.291)
OP2: (31.774,148.060,64.359)
C4: (30.045,153.335,57.087)
O5': (31.087,150.253,63.314)
C3': (28.160,149.752,60.920)
C1': (28.263,152.087,60.642)
O4': (29.308,151.695,61.520)
C5': (30.402,149.647,62.197)
P: (32.207,149.475,64.134)
O2: (27.278,154.064,59.030)
C4': (29.076,150.343,61.975)
C2': (27.261,150.941,60.591)
O2': (26.314,151.223,61.610)
N1: (28.859,152.458,59.348)
N3: (28.941,153.953,57.514)
N4: (30.659,153.825,56.006)
C6: (29.955,151.794,58.872)
C5: (30.577,152.197,57.756)
O3': (27.404,148.702,61.512)
OP1: (32.540,150.341,65.291)
OP2: (31.774,148.060,64.359)
C4: (30.045,153.335,57.087)
O5': (31.087,150.253,63.314)
C3': (28.160,149.752,60.920)
C1': (28.263,152.087,60.642)
O4': (29.308,151.695,61.520)
C5': (30.402,149.647,62.197)
P: (32.207,149.475,64.134)
O2: (27.278,154.064,59.030)
C4': (29.076,150.343,61.975)
C2': (27.261,150.941,60.591)
O2': (26.314,151.223,61.610)
N1: (28.859,152.458,59.348)
N3: (28.941,153.953,57.514)
N4: (30.659,153.825,56.006)
C6: (29.955,151.794,58.872)
C5: (30.577,152.197,57.756)
O3': (27.404,148.702,61.512)
OP1: (19.762,141.169,66.917)
OP2: (20.806,143.390,66.170)
C3': (24.294,141.137,69.219)
C1': (25.918,141.780,67.669)
C5': (22.736,140.319,67.367)
O6: (29.515,145.302,64.463)
O4': (25.058,140.920,66.971)
C8: (25.918,143.963,66.371)
C2: (29.795,142.024,65.820)
C6: (29.164,144.269,65.039)
C5: (27.903,143.965,65.617)
C4: (27.737,142.744,66.231)
P: (20.918,141.929,66.367)
C4': (24.131,140.335,67.932)
C2': (25.027,142.381,68.747)
O2': (25.816,143.001,69.739)
N1: (30.068,143.214,65.192)
N2: (30.789,141.135,65.872)
N3: (28.628,141.732,66.361)
N7: (26.742,144.719,65.701)
N9: (26.480,142.777,66.768)
O5': (22.237,141.650,67.215)
O3': (25.160,140.434,70.066)
OP2: (20.806,143.390,66.170)
C3': (24.294,141.137,69.219)
C1': (25.918,141.780,67.669)
C5': (22.736,140.319,67.367)
O6: (29.515,145.302,64.463)
O4': (25.058,140.920,66.971)
C8: (25.918,143.963,66.371)
C2: (29.795,142.024,65.820)
C6: (29.164,144.269,65.039)
C5: (27.903,143.965,65.617)
C4: (27.737,142.744,66.231)
P: (20.918,141.929,66.367)
C4': (24.131,140.335,67.932)
C2': (25.027,142.381,68.747)
O2': (25.816,143.001,69.739)
N1: (30.068,143.214,65.192)
N2: (30.789,141.135,65.872)
N3: (28.628,141.732,66.361)
N7: (26.742,144.719,65.701)
N9: (26.480,142.777,66.768)
O5': (22.237,141.650,67.215)
O3': (25.160,140.434,70.066)
Image (generated by PyMOL):