Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1953:A1954
Extra
PDB:
ATOM 1 O3' C A1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 2 P A A1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 3 OP1 A A1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 4 OP2 A A1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 5 O5' A A1953 102.021 108.299 105.056 1.00 66.76 O
ATOM 6 C5' A A1953 102.683 108.421 103.792 1.00 64.86 C
ATOM 7 C4' A A1953 102.382 109.766 103.193 1.00 63.85 C
ATOM 8 O4' A A1953 101.017 109.786 102.684 1.00 64.00 O
ATOM 9 C3' A A1953 102.523 110.932 104.173 1.00 62.08 C
ATOM 10 O3' A A1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 11 C2' A A1953 101.065 111.238 104.543 1.00 62.78 C
ATOM 12 O2' A A1953 100.819 112.592 104.900 1.00 61.48 O
ATOM 13 C1' A A1953 100.340 110.890 103.239 1.00 63.49 C
ATOM 14 N9 A A1953 98.913 110.576 103.371 1.00 63.87 N
ATOM 15 C8 A A1953 98.322 109.506 103.990 1.00 64.20 C
ATOM 16 N7 A A1953 97.015 109.511 103.916 1.00 65.61 N
ATOM 17 C5 A A1953 96.724 110.661 103.197 1.00 65.85 C
ATOM 18 C6 A A1953 95.507 111.230 102.763 1.00 67.68 C
ATOM 19 N6 A A1953 94.306 110.684 102.990 1.00 68.90 N
ATOM 20 N1 A A1953 95.569 112.392 102.074 1.00 67.55 N
ATOM 21 C2 A A1953 96.769 112.928 101.841 1.00 66.94 C
ATOM 22 N3 A A1953 97.975 112.484 102.186 1.00 65.24 N
ATOM 23 C4 A A1953 97.882 111.333 102.867 1.00 64.57 C
ATOM 24 P U A1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 25 OP1 U A1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 26 OP2 U A1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 27 O5' U A1954 104.260 114.179 103.204 1.00 57.14 O
TER
ATOM 1 O3' A B1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 2 P U B1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 3 OP1 U B1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 4 OP2 U B1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 5 O5' U B1954 104.260 114.179 103.204 1.00 57.14 O
ATOM 6 C5' U B1954 105.023 114.461 102.047 1.00 55.20 C
ATOM 7 C4' U B1954 105.651 115.816 102.195 1.00 54.99 C
ATOM 8 O4' U B1954 106.180 115.961 103.531 1.00 55.09 O
ATOM 9 C3' U B1954 106.799 116.113 101.270 1.00 54.29 C
ATOM 10 O3' U B1954 106.305 116.613 100.061 1.00 54.02 O
ATOM 11 C2' U B1954 107.589 117.154 102.043 1.00 55.56 C
ATOM 12 O2' U B1954 107.132 118.471 101.854 1.00 57.32 O
ATOM 13 C1' U B1954 107.371 116.715 103.494 1.00 55.57 C
ATOM 14 N1 U B1954 108.464 115.848 103.964 1.00 57.02 N
ATOM 15 C2 U B1954 109.771 116.306 103.851 1.00 57.06 C
ATOM 16 O2 U B1954 110.050 117.409 103.442 1.00 56.04 O
ATOM 17 N3 U B1954 110.732 115.411 104.250 1.00 58.18 N
ATOM 18 C4 U B1954 110.526 114.143 104.761 1.00 59.15 C
ATOM 19 O4 U B1954 111.493 113.429 105.014 1.00 60.95 O
ATOM 20 C5 U B1954 109.157 113.760 104.880 1.00 59.21 C
ATOM 21 C6 U B1954 108.199 114.597 104.486 1.00 58.08 C
ATOM 22 P G B1955 106.827 115.985 98.698 1.00 55.51 P
ATOM 23 OP1 G B1955 106.075 116.603 97.599 1.00 55.98 O
ATOM 24 OP2 G B1955 106.791 114.505 98.885 1.00 57.24 O
ATOM 25 O5' G B1955 108.318 116.507 98.625 1.00 56.42 O
TER
ATOM 2 P A A1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 3 OP1 A A1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 4 OP2 A A1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 5 O5' A A1953 102.021 108.299 105.056 1.00 66.76 O
ATOM 6 C5' A A1953 102.683 108.421 103.792 1.00 64.86 C
ATOM 7 C4' A A1953 102.382 109.766 103.193 1.00 63.85 C
ATOM 8 O4' A A1953 101.017 109.786 102.684 1.00 64.00 O
ATOM 9 C3' A A1953 102.523 110.932 104.173 1.00 62.08 C
ATOM 10 O3' A A1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 11 C2' A A1953 101.065 111.238 104.543 1.00 62.78 C
ATOM 12 O2' A A1953 100.819 112.592 104.900 1.00 61.48 O
ATOM 13 C1' A A1953 100.340 110.890 103.239 1.00 63.49 C
ATOM 14 N9 A A1953 98.913 110.576 103.371 1.00 63.87 N
ATOM 15 C8 A A1953 98.322 109.506 103.990 1.00 64.20 C
ATOM 16 N7 A A1953 97.015 109.511 103.916 1.00 65.61 N
ATOM 17 C5 A A1953 96.724 110.661 103.197 1.00 65.85 C
ATOM 18 C6 A A1953 95.507 111.230 102.763 1.00 67.68 C
ATOM 19 N6 A A1953 94.306 110.684 102.990 1.00 68.90 N
ATOM 20 N1 A A1953 95.569 112.392 102.074 1.00 67.55 N
ATOM 21 C2 A A1953 96.769 112.928 101.841 1.00 66.94 C
ATOM 22 N3 A A1953 97.975 112.484 102.186 1.00 65.24 N
ATOM 23 C4 A A1953 97.882 111.333 102.867 1.00 64.57 C
ATOM 24 P U A1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 25 OP1 U A1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 26 OP2 U A1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 27 O5' U A1954 104.260 114.179 103.204 1.00 57.14 O
TER
ATOM 1 O3' A B1953 103.072 112.031 103.433 1.00 61.07 O
ATOM 2 P U B1954 104.406 112.786 103.935 1.00 59.10 P
ATOM 3 OP1 U B1954 105.604 112.098 103.362 1.00 59.07 O
ATOM 4 OP2 U B1954 104.348 113.060 105.387 1.00 60.63 O
ATOM 5 O5' U B1954 104.260 114.179 103.204 1.00 57.14 O
ATOM 6 C5' U B1954 105.023 114.461 102.047 1.00 55.20 C
ATOM 7 C4' U B1954 105.651 115.816 102.195 1.00 54.99 C
ATOM 8 O4' U B1954 106.180 115.961 103.531 1.00 55.09 O
ATOM 9 C3' U B1954 106.799 116.113 101.270 1.00 54.29 C
ATOM 10 O3' U B1954 106.305 116.613 100.061 1.00 54.02 O
ATOM 11 C2' U B1954 107.589 117.154 102.043 1.00 55.56 C
ATOM 12 O2' U B1954 107.132 118.471 101.854 1.00 57.32 O
ATOM 13 C1' U B1954 107.371 116.715 103.494 1.00 55.57 C
ATOM 14 N1 U B1954 108.464 115.848 103.964 1.00 57.02 N
ATOM 15 C2 U B1954 109.771 116.306 103.851 1.00 57.06 C
ATOM 16 O2 U B1954 110.050 117.409 103.442 1.00 56.04 O
ATOM 17 N3 U B1954 110.732 115.411 104.250 1.00 58.18 N
ATOM 18 C4 U B1954 110.526 114.143 104.761 1.00 59.15 C
ATOM 19 O4 U B1954 111.493 113.429 105.014 1.00 60.95 O
ATOM 20 C5 U B1954 109.157 113.760 104.880 1.00 59.21 C
ATOM 21 C6 U B1954 108.199 114.597 104.486 1.00 58.08 C
ATOM 22 P G B1955 106.827 115.985 98.698 1.00 55.51 P
ATOM 23 OP1 G B1955 106.075 116.603 97.599 1.00 55.98 O
ATOM 24 OP2 G B1955 106.791 114.505 98.885 1.00 57.24 O
ATOM 25 O5' G B1955 108.318 116.507 98.625 1.00 56.42 O
TER
Atoms:
OP1: (100.222,106.662,104.654)
OP2: (102.539,105.933,105.522)
C3': (102.523,110.932,104.173)
C1': (100.340,110.890,103.239)
C5': (102.683,108.421,103.792)
O4': (101.017,109.786,102.684)
C8: (98.322,109.506,103.990)
O2': (100.819,112.592,104.900)
C6: (95.507,111.230,102.763)
C5: (96.724,110.661,103.197)
C4: (97.882,111.333,102.867)
P: (101.415,106.911,105.516)
C4': (102.382,109.766,103.193)
C2': (101.065,111.238,104.543)
C2: (96.769,112.928,101.841)
N1: (95.569,112.392,102.074)
N3: (97.975,112.484,102.186)
N6: (94.306,110.684,102.990)
N7: (97.015,109.511,103.916)
N9: (98.913,110.576,103.371)
O5': (102.021,108.299,105.056)
O3': (103.072,112.031,103.433)
OP2: (102.539,105.933,105.522)
C3': (102.523,110.932,104.173)
C1': (100.340,110.890,103.239)
C5': (102.683,108.421,103.792)
O4': (101.017,109.786,102.684)
C8: (98.322,109.506,103.990)
O2': (100.819,112.592,104.900)
C6: (95.507,111.230,102.763)
C5: (96.724,110.661,103.197)
C4: (97.882,111.333,102.867)
P: (101.415,106.911,105.516)
C4': (102.382,109.766,103.193)
C2': (101.065,111.238,104.543)
C2: (96.769,112.928,101.841)
N1: (95.569,112.392,102.074)
N3: (97.975,112.484,102.186)
N6: (94.306,110.684,102.990)
N7: (97.015,109.511,103.916)
N9: (98.913,110.576,103.371)
O5': (102.021,108.299,105.056)
O3': (103.072,112.031,103.433)
C4: (110.526,114.143,104.761)
N3: (110.732,115.411,104.250)
OP1: (105.604,112.098,103.362)
OP2: (104.348,113.060,105.387)
C2: (109.771,116.306,103.851)
C1': (107.371,116.715,103.494)
C3': (106.799,116.113,101.270)
O5': (104.260,114.179,103.204)
O4': (106.180,115.961,103.531)
C5': (105.023,114.461,102.047)
P: (104.406,112.786,103.935)
C4': (105.651,115.816,102.195)
C2': (107.589,117.154,102.043)
O2': (107.132,118.471,101.854)
N1: (108.464,115.848,103.964)
O4: (111.493,113.429,105.014)
O2: (110.050,117.409,103.442)
C6: (108.199,114.597,104.486)
C5: (109.157,113.760,104.880)
O3': (106.305,116.613,100.061)
N3: (110.732,115.411,104.250)
OP1: (105.604,112.098,103.362)
OP2: (104.348,113.060,105.387)
C2: (109.771,116.306,103.851)
C1': (107.371,116.715,103.494)
C3': (106.799,116.113,101.270)
O5': (104.260,114.179,103.204)
O4': (106.180,115.961,103.531)
C5': (105.023,114.461,102.047)
P: (104.406,112.786,103.935)
C4': (105.651,115.816,102.195)
C2': (107.589,117.154,102.043)
O2': (107.132,118.471,101.854)
N1: (108.464,115.848,103.964)
O4: (111.493,113.429,105.014)
O2: (110.050,117.409,103.442)
C6: (108.199,114.597,104.486)
C5: (109.157,113.760,104.880)
O3': (106.305,116.613,100.061)
Image (generated by PyMOL):