ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1FJG:A114:A613

Extra

PDB:
ATOM 1 O3' U A 113 122.590 87.586 -10.095 1.00 43.80 O
ATOM 2 P G A 114 121.076 87.108 -9.810 1.00 40.61 P
ATOM 3 OP1 G A 114 120.467 88.161 -8.948 1.00 48.12 O
ATOM 4 OP2 G A 114 121.069 85.699 -9.352 1.00 48.12 O
ATOM 5 O5' G A 114 120.386 87.156 -11.246 1.00 40.61 O
ATOM 6 C5' G A 114 120.339 88.388 -11.963 1.00 40.61 C
ATOM 7 C4' G A 114 120.034 88.151 -13.412 1.00 40.61 C
ATOM 8 O4' G A 114 121.090 87.394 -14.057 1.00 40.61 O
ATOM 9 C3' G A 114 118.785 87.365 -13.724 1.00 40.61 C
ATOM 10 O3' G A 114 117.647 88.190 -13.643 1.00 40.61 O
ATOM 11 C2' G A 114 119.040 86.909 -15.155 1.00 40.61 C
ATOM 12 O2' G A 114 118.760 87.951 -16.062 1.00 40.61 O
ATOM 13 C1' G A 114 120.550 86.670 -15.152 1.00 40.61 C
ATOM 14 N9 G A 114 120.917 85.264 -15.020 1.00 48.12 N
ATOM 15 C8 G A 114 121.288 84.617 -13.870 1.00 48.12 C
ATOM 16 N7 G A 114 121.570 83.357 -14.060 1.00 48.12 N
ATOM 17 C5 G A 114 121.366 83.155 -15.417 1.00 48.12 C
ATOM 18 C6 G A 114 121.509 81.975 -16.207 1.00 48.12 C
ATOM 19 O6 G A 114 121.839 80.830 -15.846 1.00 48.12 O
ATOM 20 N1 G A 114 121.224 82.219 -17.543 1.00 48.12 N
ATOM 21 C2 G A 114 120.855 83.427 -18.058 1.00 48.12 C
ATOM 22 N2 G A 114 120.675 83.455 -19.377 1.00 48.12 N
ATOM 23 N3 G A 114 120.689 84.530 -17.332 1.00 48.12 N
ATOM 24 C4 G A 114 120.965 84.321 -16.028 1.00 48.12 C
ATOM 25 P G A 115 116.186 87.525 -13.616 1.00 50.01 P
ATOM 26 OP1 G A 115 115.273 88.655 -13.315 1.00 41.24 O
ATOM 27 OP2 G A 115 116.183 86.329 -12.732 1.00 41.24 O
ATOM 28 O5' G A 115 115.970 87.036 -15.121 1.00 50.01 O
TER

ATOM 1 O3' C B 612 121.389 91.684 -18.258 1.00 47.05 O
ATOM 2 P G B 613 120.111 92.265 -19.058 1.00 51.57 P
ATOM 3 OP1 G B 613 120.075 91.668 -20.426 1.00 61.50 O
ATOM 4 OP2 G B 613 120.101 93.736 -18.894 1.00 61.50 O
ATOM 5 O5' G B 613 118.848 91.684 -18.288 1.00 51.57 O
ATOM 6 C5' G B 613 118.471 90.316 -18.448 1.00 51.57 C
ATOM 7 C4' G B 613 117.101 90.085 -17.888 1.00 51.57 C
ATOM 8 O4' G B 613 117.113 90.328 -16.462 1.00 51.57 O
ATOM 9 C3' G B 613 116.026 91.008 -18.410 1.00 51.57 C
ATOM 10 O3' G B 613 115.531 90.583 -19.661 1.00 51.57 O
ATOM 11 C2' G B 613 114.986 90.962 -17.302 1.00 51.57 C
ATOM 12 O2' G B 613 114.183 89.806 -17.349 1.00 51.57 O
ATOM 13 C1' G B 613 115.867 90.866 -16.060 1.00 51.57 C
ATOM 14 N9 G B 613 116.092 92.175 -15.464 1.00 61.50 N
ATOM 15 C8 G B 613 117.243 92.915 -15.491 1.00 61.50 C
ATOM 16 N7 G B 613 117.126 94.063 -14.886 1.00 61.50 N
ATOM 17 C5 G B 613 115.819 94.076 -14.433 1.00 61.50 C
ATOM 18 C6 G B 613 115.112 95.064 -13.714 1.00 61.50 C
ATOM 19 O6 G B 613 115.507 96.177 -13.336 1.00 61.50 O
ATOM 20 N1 G B 613 113.812 94.660 -13.443 1.00 61.50 N
ATOM 21 C2 G B 613 113.262 93.464 -13.824 1.00 61.50 C
ATOM 22 N2 G B 613 111.994 93.252 -13.448 1.00 61.50 N
ATOM 23 N3 G B 613 113.907 92.544 -14.515 1.00 61.50 N
ATOM 24 C4 G B 613 115.173 92.913 -14.777 1.00 61.50 C
ATOM 25 P U B 614 115.009 91.683 -20.705 1.00 48.92 P
ATOM 26 OP1 U B 614 114.658 91.022 -21.986 1.00 58.54 O
ATOM 27 OP2 U B 614 115.962 92.813 -20.698 1.00 58.54 O
ATOM 28 O5' U B 614 113.669 92.188 -20.033 1.00 48.92 O
TER

Atoms:
OP1: (120.467,88.161,-8.948)
OP2: (121.069,85.699,-9.352)
C3': (118.785,87.365,-13.724)
C1': (120.550,86.670,-15.152)
C5': (120.339,88.388,-11.963)
O6: (121.839,80.830,-15.846)
O4': (121.090,87.394,-14.057)
C8: (121.288,84.617,-13.870)
C2: (120.855,83.427,-18.058)
C6: (121.509,81.975,-16.207)
C5: (121.366,83.155,-15.417)
C4: (120.965,84.321,-16.028)
P: (121.076,87.108,-9.810)
C4': (120.034,88.151,-13.412)
C2': (119.040,86.909,-15.155)
O2': (118.760,87.951,-16.062)
N1: (121.224,82.219,-17.543)
N2: (120.675,83.455,-19.377)
N3: (120.689,84.530,-17.332)
N7: (121.570,83.357,-14.060)
N9: (120.917,85.264,-15.020)
O5': (120.386,87.156,-11.246)
O3': (117.647,88.190,-13.643)
OP1: (120.075,91.668,-20.426)
OP2: (120.101,93.736,-18.894)
C3': (116.026,91.008,-18.410)
C1': (115.867,90.866,-16.060)
C5': (118.471,90.316,-18.448)
O6: (115.507,96.177,-13.336)
O4': (117.113,90.328,-16.462)
C8: (117.243,92.915,-15.491)
C2: (113.262,93.464,-13.824)
C6: (115.112,95.064,-13.714)
C5: (115.819,94.076,-14.433)
C4: (115.173,92.913,-14.777)
P: (120.111,92.265,-19.058)
C4': (117.101,90.085,-17.888)
C2': (114.986,90.962,-17.302)
O2': (114.183,89.806,-17.349)
N1: (113.812,94.660,-13.443)
N2: (111.994,93.252,-13.448)
N3: (113.907,92.544,-14.515)
N7: (117.126,94.063,-14.886)
N9: (116.092,92.175,-15.464)
O5': (118.848,91.684,-18.288)
O3': (115.531,90.583,-19.661)
Image (generated by PyMOL):
PyMOL image
show in jmol