Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1199:A2025
Extra
PDB:
ATOM 1 O3' G A1198 34.959 112.717 120.999 1.00 39.53 O
ATOM 2 P G A1199 34.795 112.762 122.582 1.00 42.74 P
ATOM 3 OP1 G A1199 36.138 113.040 123.145 1.00 42.76 O
ATOM 4 OP2 G A1199 34.052 111.532 122.976 1.00 40.42 O
ATOM 5 O5' G A1199 33.875 114.026 122.840 1.00 39.48 O
ATOM 6 C5' G A1199 34.343 115.336 122.566 1.00 36.23 C
ATOM 7 C4' G A1199 33.185 116.275 122.582 1.00 34.01 C
ATOM 8 O4' G A1199 32.214 115.761 121.638 1.00 33.92 O
ATOM 9 C3' G A1199 32.401 116.299 123.886 1.00 34.24 C
ATOM 10 O3' G A1199 32.980 117.125 124.887 1.00 35.55 O
ATOM 11 C2' G A1199 31.064 116.821 123.409 1.00 34.10 C
ATOM 12 O2' G A1199 31.164 118.188 123.064 1.00 34.80 O
ATOM 13 C1' G A1199 30.896 116.006 122.127 1.00 34.53 C
ATOM 14 N9 G A1199 30.221 114.724 122.355 1.00 33.09 N
ATOM 15 C8 G A1199 30.783 113.477 122.295 1.00 32.42 C
ATOM 16 N7 G A1199 29.929 112.521 122.521 1.00 34.19 N
ATOM 17 C5 G A1199 28.729 113.172 122.756 1.00 33.49 C
ATOM 18 C6 G A1199 27.443 112.643 123.061 1.00 35.10 C
ATOM 19 O6 G A1199 27.107 111.458 123.178 1.00 36.36 O
ATOM 20 N1 G A1199 26.501 113.649 123.230 1.00 35.69 N
ATOM 21 C2 G A1199 26.756 114.992 123.117 1.00 36.75 C
ATOM 22 N2 G A1199 25.694 115.817 123.313 1.00 36.45 N
ATOM 23 N3 G A1199 27.958 115.496 122.833 1.00 36.17 N
ATOM 24 C4 G A1199 28.888 114.531 122.666 1.00 33.43 C
ATOM 25 P G A1200 32.712 116.808 126.446 1.00 35.70 P
ATOM 26 OP1 G A1200 33.585 117.721 127.203 1.00 33.52 O
ATOM 27 OP2 G A1200 32.787 115.352 126.686 1.00 32.84 O
ATOM 28 O5' G A1200 31.202 117.227 126.710 1.00 35.22 O
TER
ATOM 1 O3' U B2024 31.618 115.259 111.992 1.00 31.83 O
ATOM 2 P G B2025 30.837 116.439 112.743 1.00 32.79 P
ATOM 3 OP1 G B2025 29.489 115.920 113.018 1.00 30.60 O
ATOM 4 OP2 G B2025 31.008 117.702 111.982 1.00 29.67 O
ATOM 5 O5' G B2025 31.611 116.561 114.119 1.00 29.97 O
ATOM 6 C5' G B2025 31.659 115.448 115.012 1.00 30.76 C
ATOM 7 C4' G B2025 32.438 115.808 116.245 1.00 31.04 C
ATOM 8 O4' G B2025 33.830 115.999 115.928 1.00 30.50 O
ATOM 9 C3' G B2025 32.005 117.103 116.887 1.00 31.95 C
ATOM 10 O3' G B2025 30.915 116.849 117.749 1.00 35.12 O
ATOM 11 C2' G B2025 33.244 117.527 117.649 1.00 31.64 C
ATOM 12 O2' G B2025 33.331 116.815 118.873 1.00 32.51 O
ATOM 13 C1' G B2025 34.352 117.039 116.716 1.00 31.20 C
ATOM 14 N9 G B2025 34.867 118.059 115.812 1.00 30.73 N
ATOM 15 C8 G B2025 34.422 118.346 114.547 1.00 31.36 C
ATOM 16 N7 G B2025 35.113 119.279 113.961 1.00 31.44 N
ATOM 17 C5 G B2025 36.059 119.642 114.906 1.00 29.98 C
ATOM 18 C6 G B2025 37.080 120.606 114.847 1.00 28.97 C
ATOM 19 O6 G B2025 37.356 121.359 113.920 1.00 28.09 O
ATOM 20 N1 G B2025 37.819 120.653 116.030 1.00 27.58 N
ATOM 21 C2 G B2025 37.597 119.870 117.126 1.00 26.84 C
ATOM 22 N2 G B2025 38.417 120.060 118.163 1.00 24.31 N
ATOM 23 N3 G B2025 36.640 118.966 117.195 1.00 29.15 N
ATOM 24 C4 G B2025 35.914 118.905 116.056 1.00 30.17 C
ATOM 25 P G B2026 30.003 118.061 118.245 1.00 38.61 P
ATOM 26 OP1 G B2026 28.752 117.460 118.764 1.00 36.00 O
ATOM 27 OP2 G B2026 29.955 119.038 117.130 1.00 35.48 O
ATOM 28 O5' G B2026 30.826 118.701 119.448 1.00 35.37 O
TER
ATOM 2 P G A1199 34.795 112.762 122.582 1.00 42.74 P
ATOM 3 OP1 G A1199 36.138 113.040 123.145 1.00 42.76 O
ATOM 4 OP2 G A1199 34.052 111.532 122.976 1.00 40.42 O
ATOM 5 O5' G A1199 33.875 114.026 122.840 1.00 39.48 O
ATOM 6 C5' G A1199 34.343 115.336 122.566 1.00 36.23 C
ATOM 7 C4' G A1199 33.185 116.275 122.582 1.00 34.01 C
ATOM 8 O4' G A1199 32.214 115.761 121.638 1.00 33.92 O
ATOM 9 C3' G A1199 32.401 116.299 123.886 1.00 34.24 C
ATOM 10 O3' G A1199 32.980 117.125 124.887 1.00 35.55 O
ATOM 11 C2' G A1199 31.064 116.821 123.409 1.00 34.10 C
ATOM 12 O2' G A1199 31.164 118.188 123.064 1.00 34.80 O
ATOM 13 C1' G A1199 30.896 116.006 122.127 1.00 34.53 C
ATOM 14 N9 G A1199 30.221 114.724 122.355 1.00 33.09 N
ATOM 15 C8 G A1199 30.783 113.477 122.295 1.00 32.42 C
ATOM 16 N7 G A1199 29.929 112.521 122.521 1.00 34.19 N
ATOM 17 C5 G A1199 28.729 113.172 122.756 1.00 33.49 C
ATOM 18 C6 G A1199 27.443 112.643 123.061 1.00 35.10 C
ATOM 19 O6 G A1199 27.107 111.458 123.178 1.00 36.36 O
ATOM 20 N1 G A1199 26.501 113.649 123.230 1.00 35.69 N
ATOM 21 C2 G A1199 26.756 114.992 123.117 1.00 36.75 C
ATOM 22 N2 G A1199 25.694 115.817 123.313 1.00 36.45 N
ATOM 23 N3 G A1199 27.958 115.496 122.833 1.00 36.17 N
ATOM 24 C4 G A1199 28.888 114.531 122.666 1.00 33.43 C
ATOM 25 P G A1200 32.712 116.808 126.446 1.00 35.70 P
ATOM 26 OP1 G A1200 33.585 117.721 127.203 1.00 33.52 O
ATOM 27 OP2 G A1200 32.787 115.352 126.686 1.00 32.84 O
ATOM 28 O5' G A1200 31.202 117.227 126.710 1.00 35.22 O
TER
ATOM 1 O3' U B2024 31.618 115.259 111.992 1.00 31.83 O
ATOM 2 P G B2025 30.837 116.439 112.743 1.00 32.79 P
ATOM 3 OP1 G B2025 29.489 115.920 113.018 1.00 30.60 O
ATOM 4 OP2 G B2025 31.008 117.702 111.982 1.00 29.67 O
ATOM 5 O5' G B2025 31.611 116.561 114.119 1.00 29.97 O
ATOM 6 C5' G B2025 31.659 115.448 115.012 1.00 30.76 C
ATOM 7 C4' G B2025 32.438 115.808 116.245 1.00 31.04 C
ATOM 8 O4' G B2025 33.830 115.999 115.928 1.00 30.50 O
ATOM 9 C3' G B2025 32.005 117.103 116.887 1.00 31.95 C
ATOM 10 O3' G B2025 30.915 116.849 117.749 1.00 35.12 O
ATOM 11 C2' G B2025 33.244 117.527 117.649 1.00 31.64 C
ATOM 12 O2' G B2025 33.331 116.815 118.873 1.00 32.51 O
ATOM 13 C1' G B2025 34.352 117.039 116.716 1.00 31.20 C
ATOM 14 N9 G B2025 34.867 118.059 115.812 1.00 30.73 N
ATOM 15 C8 G B2025 34.422 118.346 114.547 1.00 31.36 C
ATOM 16 N7 G B2025 35.113 119.279 113.961 1.00 31.44 N
ATOM 17 C5 G B2025 36.059 119.642 114.906 1.00 29.98 C
ATOM 18 C6 G B2025 37.080 120.606 114.847 1.00 28.97 C
ATOM 19 O6 G B2025 37.356 121.359 113.920 1.00 28.09 O
ATOM 20 N1 G B2025 37.819 120.653 116.030 1.00 27.58 N
ATOM 21 C2 G B2025 37.597 119.870 117.126 1.00 26.84 C
ATOM 22 N2 G B2025 38.417 120.060 118.163 1.00 24.31 N
ATOM 23 N3 G B2025 36.640 118.966 117.195 1.00 29.15 N
ATOM 24 C4 G B2025 35.914 118.905 116.056 1.00 30.17 C
ATOM 25 P G B2026 30.003 118.061 118.245 1.00 38.61 P
ATOM 26 OP1 G B2026 28.752 117.460 118.764 1.00 36.00 O
ATOM 27 OP2 G B2026 29.955 119.038 117.130 1.00 35.48 O
ATOM 28 O5' G B2026 30.826 118.701 119.448 1.00 35.37 O
TER
Atoms:
OP1: (36.138,113.040,123.145)
OP2: (34.052,111.532,122.976)
C3': (32.401,116.299,123.886)
C1': (30.896,116.006,122.127)
C5': (34.343,115.336,122.566)
O6: (27.107,111.458,123.178)
O4': (32.214,115.761,121.638)
C8: (30.783,113.477,122.295)
C2: (26.756,114.992,123.117)
C6: (27.443,112.643,123.061)
C5: (28.729,113.172,122.756)
C4: (28.888,114.531,122.666)
P: (34.795,112.762,122.582)
C4': (33.185,116.275,122.582)
C2': (31.064,116.821,123.409)
O2': (31.164,118.188,123.064)
N1: (26.501,113.649,123.230)
N2: (25.694,115.817,123.313)
N3: (27.958,115.496,122.833)
N7: (29.929,112.521,122.521)
N9: (30.221,114.724,122.355)
O5': (33.875,114.026,122.840)
O3': (32.980,117.125,124.887)
OP2: (34.052,111.532,122.976)
C3': (32.401,116.299,123.886)
C1': (30.896,116.006,122.127)
C5': (34.343,115.336,122.566)
O6: (27.107,111.458,123.178)
O4': (32.214,115.761,121.638)
C8: (30.783,113.477,122.295)
C2: (26.756,114.992,123.117)
C6: (27.443,112.643,123.061)
C5: (28.729,113.172,122.756)
C4: (28.888,114.531,122.666)
P: (34.795,112.762,122.582)
C4': (33.185,116.275,122.582)
C2': (31.064,116.821,123.409)
O2': (31.164,118.188,123.064)
N1: (26.501,113.649,123.230)
N2: (25.694,115.817,123.313)
N3: (27.958,115.496,122.833)
N7: (29.929,112.521,122.521)
N9: (30.221,114.724,122.355)
O5': (33.875,114.026,122.840)
O3': (32.980,117.125,124.887)
OP1: (29.489,115.920,113.018)
OP2: (31.008,117.702,111.982)
C3': (32.005,117.103,116.887)
C1': (34.352,117.039,116.716)
C5': (31.659,115.448,115.012)
O6: (37.356,121.359,113.920)
O4': (33.830,115.999,115.928)
C8: (34.422,118.346,114.547)
C2: (37.597,119.870,117.126)
C6: (37.080,120.606,114.847)
C5: (36.059,119.642,114.906)
C4: (35.914,118.905,116.056)
P: (30.837,116.439,112.743)
C4': (32.438,115.808,116.245)
C2': (33.244,117.527,117.649)
O2': (33.331,116.815,118.873)
N1: (37.819,120.653,116.030)
N2: (38.417,120.060,118.163)
N3: (36.640,118.966,117.195)
N7: (35.113,119.279,113.961)
N9: (34.867,118.059,115.812)
O5': (31.611,116.561,114.119)
O3': (30.915,116.849,117.749)
OP2: (31.008,117.702,111.982)
C3': (32.005,117.103,116.887)
C1': (34.352,117.039,116.716)
C5': (31.659,115.448,115.012)
O6: (37.356,121.359,113.920)
O4': (33.830,115.999,115.928)
C8: (34.422,118.346,114.547)
C2: (37.597,119.870,117.126)
C6: (37.080,120.606,114.847)
C5: (36.059,119.642,114.906)
C4: (35.914,118.905,116.056)
P: (30.837,116.439,112.743)
C4': (32.438,115.808,116.245)
C2': (33.244,117.527,117.649)
O2': (33.331,116.815,118.873)
N1: (37.819,120.653,116.030)
N2: (38.417,120.060,118.163)
N3: (36.640,118.966,117.195)
N7: (35.113,119.279,113.961)
N9: (34.867,118.059,115.812)
O5': (31.611,116.561,114.119)
O3': (30.915,116.849,117.749)
Image (generated by PyMOL):