Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YI2:0503:0506
Extra
PDB:
ATOM 1 O3' G A 502 33.351 149.626 62.805 1.00 75.73 O
ATOM 2 P C A 503 32.133 149.644 63.854 1.00 68.62 P
ATOM 3 OP1 C A 503 32.480 150.535 64.990 1.00 67.46 O
ATOM 4 OP2 C A 503 31.737 148.232 64.114 1.00 66.70 O
ATOM 5 O5' C A 503 30.972 150.378 63.059 1.00 66.77 O
ATOM 6 C5' C A 503 30.251 149.715 62.013 1.00 61.55 C
ATOM 7 C4' C A 503 28.927 150.399 61.803 1.00 58.20 C
ATOM 8 O4' C A 503 29.154 151.760 61.358 1.00 55.53 O
ATOM 9 C3' C A 503 28.020 149.796 60.747 1.00 56.63 C
ATOM 10 O3' C A 503 27.264 148.740 61.333 1.00 56.62 O
ATOM 11 C2' C A 503 27.128 150.982 60.403 1.00 55.16 C
ATOM 12 O2' C A 503 26.168 151.222 61.416 1.00 55.87 O
ATOM 13 C1' C A 503 28.128 152.138 60.462 1.00 53.04 C
ATOM 14 N1 C A 503 28.746 152.492 59.174 1.00 50.39 N
ATOM 15 C2 C A 503 28.156 153.488 58.397 1.00 49.18 C
ATOM 16 O2 C A 503 27.110 154.019 58.799 1.00 49.17 O
ATOM 17 N3 C A 503 28.741 153.853 57.231 1.00 47.94 N
ATOM 18 C4 C A 503 29.875 153.264 56.843 1.00 48.64 C
ATOM 19 N4 C A 503 30.445 153.675 55.707 1.00 47.36 N
ATOM 20 C5 C A 503 30.484 152.231 57.606 1.00 47.96 C
ATOM 21 C6 C A 503 29.890 151.876 58.750 1.00 49.22 C
ATOM 22 P A A 504 27.608 147.205 60.992 1.00 54.91 P
ATOM 23 OP1 A A 504 27.049 146.392 62.097 1.00 56.40 O
ATOM 24 OP2 A A 504 29.035 147.071 60.646 1.00 54.27 O
ATOM 25 O5' A A 504 26.767 146.890 59.681 1.00 52.48 O
TER
ATOM 1 O3' U B 505 21.081 141.289 64.776 1.00 34.03 O
ATOM 2 P G B 506 20.821 142.026 66.178 1.00 39.33 P
ATOM 3 OP1 G B 506 19.649 141.348 66.798 1.00 36.60 O
ATOM 4 OP2 G B 506 20.800 143.500 65.981 1.00 37.86 O
ATOM 5 O5' G B 506 22.115 141.701 67.047 1.00 40.34 O
ATOM 6 C5' G B 506 22.624 140.363 67.141 1.00 40.46 C
ATOM 7 C4' G B 506 24.032 140.381 67.680 1.00 40.54 C
ATOM 8 O4' G B 506 24.931 140.982 66.694 1.00 41.99 O
ATOM 9 C3' G B 506 24.217 141.193 68.964 1.00 39.49 C
ATOM 10 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 11 C2' G B 506 24.897 142.459 68.457 1.00 39.06 C
ATOM 12 O2' G B 506 25.680 143.138 69.415 1.00 38.90 O
ATOM 13 C1' G B 506 25.784 141.871 67.369 1.00 40.12 C
ATOM 14 N9 G B 506 26.364 142.844 66.451 1.00 39.18 N
ATOM 15 C8 G B 506 25.809 144.023 66.014 1.00 40.22 C
ATOM 16 N7 G B 506 26.651 144.769 65.351 1.00 39.88 N
ATOM 17 C5 G B 506 27.816 144.016 65.312 1.00 41.66 C
ATOM 18 C6 G B 506 29.090 144.316 64.758 1.00 42.25 C
ATOM 19 O6 G B 506 29.454 145.345 64.187 1.00 44.81 O
ATOM 20 N1 G B 506 29.987 143.267 64.935 1.00 41.92 N
ATOM 21 C2 G B 506 29.699 142.084 65.566 1.00 42.45 C
ATOM 22 N2 G B 506 30.693 141.189 65.627 1.00 41.92 N
ATOM 23 N3 G B 506 28.522 141.796 66.097 1.00 42.70 N
ATOM 24 C4 G B 506 27.636 142.803 65.940 1.00 40.89 C
ATOM 25 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 26 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 27 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 28 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
TER
ATOM 2 P C A 503 32.133 149.644 63.854 1.00 68.62 P
ATOM 3 OP1 C A 503 32.480 150.535 64.990 1.00 67.46 O
ATOM 4 OP2 C A 503 31.737 148.232 64.114 1.00 66.70 O
ATOM 5 O5' C A 503 30.972 150.378 63.059 1.00 66.77 O
ATOM 6 C5' C A 503 30.251 149.715 62.013 1.00 61.55 C
ATOM 7 C4' C A 503 28.927 150.399 61.803 1.00 58.20 C
ATOM 8 O4' C A 503 29.154 151.760 61.358 1.00 55.53 O
ATOM 9 C3' C A 503 28.020 149.796 60.747 1.00 56.63 C
ATOM 10 O3' C A 503 27.264 148.740 61.333 1.00 56.62 O
ATOM 11 C2' C A 503 27.128 150.982 60.403 1.00 55.16 C
ATOM 12 O2' C A 503 26.168 151.222 61.416 1.00 55.87 O
ATOM 13 C1' C A 503 28.128 152.138 60.462 1.00 53.04 C
ATOM 14 N1 C A 503 28.746 152.492 59.174 1.00 50.39 N
ATOM 15 C2 C A 503 28.156 153.488 58.397 1.00 49.18 C
ATOM 16 O2 C A 503 27.110 154.019 58.799 1.00 49.17 O
ATOM 17 N3 C A 503 28.741 153.853 57.231 1.00 47.94 N
ATOM 18 C4 C A 503 29.875 153.264 56.843 1.00 48.64 C
ATOM 19 N4 C A 503 30.445 153.675 55.707 1.00 47.36 N
ATOM 20 C5 C A 503 30.484 152.231 57.606 1.00 47.96 C
ATOM 21 C6 C A 503 29.890 151.876 58.750 1.00 49.22 C
ATOM 22 P A A 504 27.608 147.205 60.992 1.00 54.91 P
ATOM 23 OP1 A A 504 27.049 146.392 62.097 1.00 56.40 O
ATOM 24 OP2 A A 504 29.035 147.071 60.646 1.00 54.27 O
ATOM 25 O5' A A 504 26.767 146.890 59.681 1.00 52.48 O
TER
ATOM 1 O3' U B 505 21.081 141.289 64.776 1.00 34.03 O
ATOM 2 P G B 506 20.821 142.026 66.178 1.00 39.33 P
ATOM 3 OP1 G B 506 19.649 141.348 66.798 1.00 36.60 O
ATOM 4 OP2 G B 506 20.800 143.500 65.981 1.00 37.86 O
ATOM 5 O5' G B 506 22.115 141.701 67.047 1.00 40.34 O
ATOM 6 C5' G B 506 22.624 140.363 67.141 1.00 40.46 C
ATOM 7 C4' G B 506 24.032 140.381 67.680 1.00 40.54 C
ATOM 8 O4' G B 506 24.931 140.982 66.694 1.00 41.99 O
ATOM 9 C3' G B 506 24.217 141.193 68.964 1.00 39.49 C
ATOM 10 O3' G B 506 25.104 140.500 69.833 1.00 39.25 O
ATOM 11 C2' G B 506 24.897 142.459 68.457 1.00 39.06 C
ATOM 12 O2' G B 506 25.680 143.138 69.415 1.00 38.90 O
ATOM 13 C1' G B 506 25.784 141.871 67.369 1.00 40.12 C
ATOM 14 N9 G B 506 26.364 142.844 66.451 1.00 39.18 N
ATOM 15 C8 G B 506 25.809 144.023 66.014 1.00 40.22 C
ATOM 16 N7 G B 506 26.651 144.769 65.351 1.00 39.88 N
ATOM 17 C5 G B 506 27.816 144.016 65.312 1.00 41.66 C
ATOM 18 C6 G B 506 29.090 144.316 64.758 1.00 42.25 C
ATOM 19 O6 G B 506 29.454 145.345 64.187 1.00 44.81 O
ATOM 20 N1 G B 506 29.987 143.267 64.935 1.00 41.92 N
ATOM 21 C2 G B 506 29.699 142.084 65.566 1.00 42.45 C
ATOM 22 N2 G B 506 30.693 141.189 65.627 1.00 41.92 N
ATOM 23 N3 G B 506 28.522 141.796 66.097 1.00 42.70 N
ATOM 24 C4 G B 506 27.636 142.803 65.940 1.00 40.89 C
ATOM 25 P A B 507 24.858 140.538 71.419 1.00 39.55 P
ATOM 26 OP1 A B 507 23.428 140.839 71.678 1.00 39.15 O
ATOM 27 OP2 A B 507 25.902 141.409 72.018 1.00 38.90 O
ATOM 28 O5' A B 507 25.142 139.037 71.864 1.00 39.30 O
TER
Atoms:
C2: (28.156,153.488,58.397)
OP1: (32.480,150.535,64.990)
OP2: (31.737,148.232,64.114)
C4: (29.875,153.264,56.843)
O5': (30.972,150.378,63.059)
C3': (28.020,149.796,60.747)
C1': (28.128,152.138,60.462)
O4': (29.154,151.760,61.358)
C5': (30.251,149.715,62.013)
P: (32.133,149.644,63.854)
O2: (27.110,154.019,58.799)
C4': (28.927,150.399,61.803)
C2': (27.128,150.982,60.403)
O2': (26.168,151.222,61.416)
N1: (28.746,152.492,59.174)
N3: (28.741,153.853,57.231)
N4: (30.445,153.675,55.707)
C6: (29.890,151.876,58.750)
C5: (30.484,152.231,57.606)
O3': (27.264,148.740,61.333)
OP1: (32.480,150.535,64.990)
OP2: (31.737,148.232,64.114)
C4: (29.875,153.264,56.843)
O5': (30.972,150.378,63.059)
C3': (28.020,149.796,60.747)
C1': (28.128,152.138,60.462)
O4': (29.154,151.760,61.358)
C5': (30.251,149.715,62.013)
P: (32.133,149.644,63.854)
O2: (27.110,154.019,58.799)
C4': (28.927,150.399,61.803)
C2': (27.128,150.982,60.403)
O2': (26.168,151.222,61.416)
N1: (28.746,152.492,59.174)
N3: (28.741,153.853,57.231)
N4: (30.445,153.675,55.707)
C6: (29.890,151.876,58.750)
C5: (30.484,152.231,57.606)
O3': (27.264,148.740,61.333)
OP1: (19.649,141.348,66.798)
OP2: (20.800,143.500,65.981)
C3': (24.217,141.193,68.964)
C1': (25.784,141.871,67.369)
C5': (22.624,140.363,67.141)
O6: (29.454,145.345,64.187)
O4': (24.931,140.982,66.694)
C8: (25.809,144.023,66.014)
C2: (29.699,142.084,65.566)
C6: (29.090,144.316,64.758)
C5: (27.816,144.016,65.312)
C4: (27.636,142.803,65.940)
P: (20.821,142.026,66.178)
C4': (24.032,140.381,67.680)
C2': (24.897,142.459,68.457)
O2': (25.680,143.138,69.415)
N1: (29.987,143.267,64.935)
N2: (30.693,141.189,65.627)
N3: (28.522,141.796,66.097)
N7: (26.651,144.769,65.351)
N9: (26.364,142.844,66.451)
O5': (22.115,141.701,67.047)
O3': (25.104,140.500,69.833)
OP2: (20.800,143.500,65.981)
C3': (24.217,141.193,68.964)
C1': (25.784,141.871,67.369)
C5': (22.624,140.363,67.141)
O6: (29.454,145.345,64.187)
O4': (24.931,140.982,66.694)
C8: (25.809,144.023,66.014)
C2: (29.699,142.084,65.566)
C6: (29.090,144.316,64.758)
C5: (27.816,144.016,65.312)
C4: (27.636,142.803,65.940)
P: (20.821,142.026,66.178)
C4': (24.032,140.381,67.680)
C2': (24.897,142.459,68.457)
O2': (25.680,143.138,69.415)
N1: (29.987,143.267,64.935)
N2: (30.693,141.189,65.627)
N3: (28.522,141.796,66.097)
N7: (26.651,144.769,65.351)
N9: (26.364,142.844,66.451)
O5': (22.115,141.701,67.047)
O3': (25.104,140.500,69.833)
Image (generated by PyMOL):