Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0503:0506
Extra
PDB:
ATOM 1 O3' G A 502 33.320 149.733 62.809 1.00 70.06 O
ATOM 2 P C A 503 32.093 149.729 63.846 1.00 62.73 P
ATOM 3 OP1 C A 503 32.438 150.606 64.995 1.00 61.85 O
ATOM 4 OP2 C A 503 31.696 148.313 64.087 1.00 60.26 O
ATOM 5 O5' C A 503 30.935 150.472 63.051 1.00 61.10 O
ATOM 6 C5' C A 503 30.198 149.813 62.014 1.00 54.62 C
ATOM 7 C4' C A 503 28.902 150.542 61.781 1.00 51.10 C
ATOM 8 O4' C A 503 29.184 151.887 61.321 1.00 48.43 O
ATOM 9 C3' C A 503 27.976 149.968 60.724 1.00 49.19 C
ATOM 10 O3' C A 503 27.184 148.940 61.309 1.00 49.17 O
ATOM 11 C2' C A 503 27.123 151.183 60.380 1.00 47.08 C
ATOM 12 O2' C A 503 26.174 151.455 61.395 1.00 47.54 O
ATOM 13 C1' C A 503 28.160 152.306 60.441 1.00 44.97 C
ATOM 14 N1 C A 503 28.772 152.661 59.151 1.00 41.78 N
ATOM 15 C2 C A 503 28.155 153.636 58.363 1.00 40.31 C
ATOM 16 O2 C A 503 27.106 154.152 58.761 1.00 39.21 O
ATOM 17 N3 C A 503 28.726 153.997 57.191 1.00 39.16 N
ATOM 18 C4 C A 503 29.874 153.434 56.809 1.00 39.46 C
ATOM 19 N4 C A 503 30.428 153.850 55.668 1.00 37.34 N
ATOM 20 C5 C A 503 30.512 152.424 57.584 1.00 38.18 C
ATOM 21 C6 C A 503 29.930 152.068 58.733 1.00 39.86 C
ATOM 22 P A A 504 27.536 147.391 61.041 1.00 48.95 P
ATOM 23 OP1 A A 504 26.990 146.624 62.189 1.00 49.47 O
ATOM 24 OP2 A A 504 28.962 147.253 60.691 1.00 48.49 O
ATOM 25 O5' A A 504 26.697 147.015 59.744 1.00 46.30 O
TER
ATOM 1 O3' U B 505 21.028 141.478 64.772 1.00 29.91 O
ATOM 2 P G B 506 20.795 142.196 66.188 1.00 34.01 P
ATOM 3 OP1 G B 506 19.663 141.477 66.841 1.00 31.83 O
ATOM 4 OP2 G B 506 20.727 143.672 66.003 1.00 31.57 O
ATOM 5 O5' G B 506 22.118 141.877 67.010 1.00 34.18 O
ATOM 6 C5' G B 506 22.601 140.533 67.120 1.00 34.94 C
ATOM 7 C4' G B 506 24.006 140.531 67.659 1.00 35.17 C
ATOM 8 O4' G B 506 24.916 141.116 66.673 1.00 35.53 O
ATOM 9 C3' G B 506 24.199 141.340 68.942 1.00 33.63 C
ATOM 10 O3' G B 506 25.050 140.617 69.812 1.00 33.64 O
ATOM 11 C2' G B 506 24.927 142.585 68.445 1.00 33.00 C
ATOM 12 O2' G B 506 25.758 143.209 69.398 1.00 32.95 O
ATOM 13 C1' G B 506 25.789 141.981 67.347 1.00 34.00 C
ATOM 14 N9 G B 506 26.362 142.964 66.437 1.00 34.16 N
ATOM 15 C8 G B 506 25.797 144.138 65.994 1.00 34.27 C
ATOM 16 N7 G B 506 26.637 144.893 65.340 1.00 34.29 N
ATOM 17 C5 G B 506 27.812 144.154 65.315 1.00 37.41 C
ATOM 18 C6 G B 506 29.089 144.467 64.775 1.00 38.22 C
ATOM 19 O6 G B 506 29.451 145.499 64.202 1.00 40.64 O
ATOM 20 N1 G B 506 29.995 143.428 64.968 1.00 37.93 N
ATOM 21 C2 G B 506 29.713 142.240 65.599 1.00 38.11 C
ATOM 22 N2 G B 506 30.717 141.354 65.680 1.00 37.73 N
ATOM 23 N3 G B 506 28.532 141.941 66.113 1.00 37.35 N
ATOM 24 C4 G B 506 27.638 142.939 65.943 1.00 36.63 C
ATOM 25 P A B 507 24.806 140.678 71.394 1.00 34.40 P
ATOM 26 OP1 A B 507 23.375 140.974 71.658 1.00 32.93 O
ATOM 27 OP2 A B 507 25.855 141.558 71.982 1.00 31.84 O
ATOM 28 O5' A B 507 25.095 139.183 71.849 1.00 34.19 O
TER
ATOM 2 P C A 503 32.093 149.729 63.846 1.00 62.73 P
ATOM 3 OP1 C A 503 32.438 150.606 64.995 1.00 61.85 O
ATOM 4 OP2 C A 503 31.696 148.313 64.087 1.00 60.26 O
ATOM 5 O5' C A 503 30.935 150.472 63.051 1.00 61.10 O
ATOM 6 C5' C A 503 30.198 149.813 62.014 1.00 54.62 C
ATOM 7 C4' C A 503 28.902 150.542 61.781 1.00 51.10 C
ATOM 8 O4' C A 503 29.184 151.887 61.321 1.00 48.43 O
ATOM 9 C3' C A 503 27.976 149.968 60.724 1.00 49.19 C
ATOM 10 O3' C A 503 27.184 148.940 61.309 1.00 49.17 O
ATOM 11 C2' C A 503 27.123 151.183 60.380 1.00 47.08 C
ATOM 12 O2' C A 503 26.174 151.455 61.395 1.00 47.54 O
ATOM 13 C1' C A 503 28.160 152.306 60.441 1.00 44.97 C
ATOM 14 N1 C A 503 28.772 152.661 59.151 1.00 41.78 N
ATOM 15 C2 C A 503 28.155 153.636 58.363 1.00 40.31 C
ATOM 16 O2 C A 503 27.106 154.152 58.761 1.00 39.21 O
ATOM 17 N3 C A 503 28.726 153.997 57.191 1.00 39.16 N
ATOM 18 C4 C A 503 29.874 153.434 56.809 1.00 39.46 C
ATOM 19 N4 C A 503 30.428 153.850 55.668 1.00 37.34 N
ATOM 20 C5 C A 503 30.512 152.424 57.584 1.00 38.18 C
ATOM 21 C6 C A 503 29.930 152.068 58.733 1.00 39.86 C
ATOM 22 P A A 504 27.536 147.391 61.041 1.00 48.95 P
ATOM 23 OP1 A A 504 26.990 146.624 62.189 1.00 49.47 O
ATOM 24 OP2 A A 504 28.962 147.253 60.691 1.00 48.49 O
ATOM 25 O5' A A 504 26.697 147.015 59.744 1.00 46.30 O
TER
ATOM 1 O3' U B 505 21.028 141.478 64.772 1.00 29.91 O
ATOM 2 P G B 506 20.795 142.196 66.188 1.00 34.01 P
ATOM 3 OP1 G B 506 19.663 141.477 66.841 1.00 31.83 O
ATOM 4 OP2 G B 506 20.727 143.672 66.003 1.00 31.57 O
ATOM 5 O5' G B 506 22.118 141.877 67.010 1.00 34.18 O
ATOM 6 C5' G B 506 22.601 140.533 67.120 1.00 34.94 C
ATOM 7 C4' G B 506 24.006 140.531 67.659 1.00 35.17 C
ATOM 8 O4' G B 506 24.916 141.116 66.673 1.00 35.53 O
ATOM 9 C3' G B 506 24.199 141.340 68.942 1.00 33.63 C
ATOM 10 O3' G B 506 25.050 140.617 69.812 1.00 33.64 O
ATOM 11 C2' G B 506 24.927 142.585 68.445 1.00 33.00 C
ATOM 12 O2' G B 506 25.758 143.209 69.398 1.00 32.95 O
ATOM 13 C1' G B 506 25.789 141.981 67.347 1.00 34.00 C
ATOM 14 N9 G B 506 26.362 142.964 66.437 1.00 34.16 N
ATOM 15 C8 G B 506 25.797 144.138 65.994 1.00 34.27 C
ATOM 16 N7 G B 506 26.637 144.893 65.340 1.00 34.29 N
ATOM 17 C5 G B 506 27.812 144.154 65.315 1.00 37.41 C
ATOM 18 C6 G B 506 29.089 144.467 64.775 1.00 38.22 C
ATOM 19 O6 G B 506 29.451 145.499 64.202 1.00 40.64 O
ATOM 20 N1 G B 506 29.995 143.428 64.968 1.00 37.93 N
ATOM 21 C2 G B 506 29.713 142.240 65.599 1.00 38.11 C
ATOM 22 N2 G B 506 30.717 141.354 65.680 1.00 37.73 N
ATOM 23 N3 G B 506 28.532 141.941 66.113 1.00 37.35 N
ATOM 24 C4 G B 506 27.638 142.939 65.943 1.00 36.63 C
ATOM 25 P A B 507 24.806 140.678 71.394 1.00 34.40 P
ATOM 26 OP1 A B 507 23.375 140.974 71.658 1.00 32.93 O
ATOM 27 OP2 A B 507 25.855 141.558 71.982 1.00 31.84 O
ATOM 28 O5' A B 507 25.095 139.183 71.849 1.00 34.19 O
TER
Atoms:
C2: (28.155,153.636,58.363)
OP1: (32.438,150.606,64.995)
OP2: (31.696,148.313,64.087)
C4: (29.874,153.434,56.809)
O5': (30.935,150.472,63.051)
C3': (27.976,149.968,60.724)
C1': (28.160,152.306,60.441)
O4': (29.184,151.887,61.321)
C5': (30.198,149.813,62.014)
P: (32.093,149.729,63.846)
O2: (27.106,154.152,58.761)
C4': (28.902,150.542,61.781)
C2': (27.123,151.183,60.380)
O2': (26.174,151.455,61.395)
N1: (28.772,152.661,59.151)
N3: (28.726,153.997,57.191)
N4: (30.428,153.850,55.668)
C6: (29.930,152.068,58.733)
C5: (30.512,152.424,57.584)
O3': (27.184,148.940,61.309)
OP1: (32.438,150.606,64.995)
OP2: (31.696,148.313,64.087)
C4: (29.874,153.434,56.809)
O5': (30.935,150.472,63.051)
C3': (27.976,149.968,60.724)
C1': (28.160,152.306,60.441)
O4': (29.184,151.887,61.321)
C5': (30.198,149.813,62.014)
P: (32.093,149.729,63.846)
O2: (27.106,154.152,58.761)
C4': (28.902,150.542,61.781)
C2': (27.123,151.183,60.380)
O2': (26.174,151.455,61.395)
N1: (28.772,152.661,59.151)
N3: (28.726,153.997,57.191)
N4: (30.428,153.850,55.668)
C6: (29.930,152.068,58.733)
C5: (30.512,152.424,57.584)
O3': (27.184,148.940,61.309)
OP1: (19.663,141.477,66.841)
OP2: (20.727,143.672,66.003)
C3': (24.199,141.340,68.942)
C1': (25.789,141.981,67.347)
C5': (22.601,140.533,67.120)
O6: (29.451,145.499,64.202)
O4': (24.916,141.116,66.673)
C8: (25.797,144.138,65.994)
C2: (29.713,142.240,65.599)
C6: (29.089,144.467,64.775)
C5: (27.812,144.154,65.315)
C4: (27.638,142.939,65.943)
P: (20.795,142.196,66.188)
C4': (24.006,140.531,67.659)
C2': (24.927,142.585,68.445)
O2': (25.758,143.209,69.398)
N1: (29.995,143.428,64.968)
N2: (30.717,141.354,65.680)
N3: (28.532,141.941,66.113)
N7: (26.637,144.893,65.340)
N9: (26.362,142.964,66.437)
O5': (22.118,141.877,67.010)
O3': (25.050,140.617,69.812)
OP2: (20.727,143.672,66.003)
C3': (24.199,141.340,68.942)
C1': (25.789,141.981,67.347)
C5': (22.601,140.533,67.120)
O6: (29.451,145.499,64.202)
O4': (24.916,141.116,66.673)
C8: (25.797,144.138,65.994)
C2: (29.713,142.240,65.599)
C6: (29.089,144.467,64.775)
C5: (27.812,144.154,65.315)
C4: (27.638,142.939,65.943)
P: (20.795,142.196,66.188)
C4': (24.006,140.531,67.659)
C2': (24.927,142.585,68.445)
O2': (25.758,143.209,69.398)
N1: (29.995,143.428,64.968)
N2: (30.717,141.354,65.680)
N3: (28.532,141.941,66.113)
N7: (26.637,144.893,65.340)
N9: (26.362,142.964,66.437)
O5': (22.118,141.877,67.010)
O3': (25.050,140.617,69.812)
Image (generated by PyMOL):