Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01953:01954
Extra
PDB:
ATOM 1 O3' C A1952 100.651 107.052 106.545 1.00 58.56 O
ATOM 2 P A A1953 101.077 106.779 105.016 1.00 61.09 P
ATOM 3 OP1 A A1953 99.861 106.534 104.191 1.00 60.94 O
ATOM 4 OP2 A A1953 102.171 105.769 105.031 1.00 61.94 O
ATOM 5 O5' A A1953 101.707 108.164 104.558 1.00 59.88 O
ATOM 6 C5' A A1953 102.400 108.278 103.314 1.00 56.84 C
ATOM 7 C4' A A1953 102.172 109.643 102.726 1.00 56.04 C
ATOM 8 O4' A A1953 100.815 109.746 102.212 1.00 56.04 O
ATOM 9 C3' A A1953 102.346 110.806 103.695 1.00 54.93 C
ATOM 10 O3' A A1953 102.877 111.897 102.975 1.00 54.58 O
ATOM 11 C2' A A1953 100.910 111.124 104.103 1.00 54.77 C
ATOM 12 O2' A A1953 100.747 112.468 104.515 1.00 53.43 O
ATOM 13 C1' A A1953 100.174 110.863 102.792 1.00 54.85 C
ATOM 14 N9 A A1953 98.745 110.570 102.910 1.00 55.41 N
ATOM 15 C8 A A1953 98.131 109.478 103.475 1.00 55.74 C
ATOM 16 N7 A A1953 96.822 109.507 103.389 1.00 55.89 N
ATOM 17 C5 A A1953 96.557 110.701 102.730 1.00 56.35 C
ATOM 18 C6 A A1953 95.357 111.323 102.333 1.00 57.09 C
ATOM 19 N6 A A1953 94.143 110.814 102.557 1.00 58.87 N
ATOM 20 N1 A A1953 95.447 112.509 101.694 1.00 56.49 N
ATOM 21 C2 A A1953 96.654 113.027 101.481 1.00 55.51 C
ATOM 22 N3 A A1953 97.847 112.545 101.808 1.00 56.21 N
ATOM 23 C4 A A1953 97.729 111.365 102.436 1.00 55.45 C
ATOM 24 P U A1954 104.268 112.548 103.425 1.00 53.96 P
ATOM 25 OP1 U A1954 105.368 111.812 102.745 1.00 51.51 O
ATOM 26 OP2 U A1954 104.281 112.688 104.898 1.00 54.58 O
ATOM 27 O5' U A1954 104.146 114.021 102.847 1.00 52.93 O
TER
ATOM 1 O3' A B1953 102.877 111.897 102.975 1.00 54.58 O
ATOM 2 P U B1954 104.268 112.548 103.425 1.00 53.96 P
ATOM 3 OP1 U B1954 105.368 111.812 102.745 1.00 51.51 O
ATOM 4 OP2 U B1954 104.281 112.688 104.898 1.00 54.58 O
ATOM 5 O5' U B1954 104.146 114.021 102.847 1.00 52.93 O
ATOM 6 C5' U B1954 104.831 114.399 101.671 1.00 49.70 C
ATOM 7 C4' U B1954 105.366 115.789 101.828 1.00 49.38 C
ATOM 8 O4' U B1954 105.939 115.961 103.147 1.00 50.00 O
ATOM 9 C3' U B1954 106.498 116.073 100.873 1.00 48.91 C
ATOM 10 O3' U B1954 105.968 116.454 99.624 1.00 47.14 O
ATOM 11 C2' U B1954 107.273 117.161 101.594 1.00 50.35 C
ATOM 12 O2' U B1954 106.673 118.432 101.474 1.00 53.08 O
ATOM 13 C1' U B1954 107.146 116.697 103.049 1.00 51.42 C
ATOM 14 N1 U B1954 108.248 115.832 103.505 1.00 53.31 N
ATOM 15 C2 U B1954 109.535 116.350 103.498 1.00 53.95 C
ATOM 16 O2 U B1954 109.795 117.488 103.138 1.00 57.11 O
ATOM 17 N3 U B1954 110.507 115.488 103.934 1.00 53.81 N
ATOM 18 C4 U B1954 110.336 114.194 104.368 1.00 53.48 C
ATOM 19 O4 U B1954 111.318 113.537 104.709 1.00 54.84 O
ATOM 20 C5 U B1954 108.985 113.732 104.351 1.00 53.47 C
ATOM 21 C6 U B1954 108.013 114.542 103.930 1.00 52.94 C
ATOM 22 P G B1955 106.575 115.820 98.297 1.00 47.59 P
ATOM 23 OP1 G B1955 105.876 116.443 97.143 1.00 49.01 O
ATOM 24 OP2 G B1955 106.604 114.340 98.432 1.00 49.09 O
ATOM 25 O5' G B1955 108.070 116.352 98.324 1.00 49.45 O
TER
ATOM 2 P A A1953 101.077 106.779 105.016 1.00 61.09 P
ATOM 3 OP1 A A1953 99.861 106.534 104.191 1.00 60.94 O
ATOM 4 OP2 A A1953 102.171 105.769 105.031 1.00 61.94 O
ATOM 5 O5' A A1953 101.707 108.164 104.558 1.00 59.88 O
ATOM 6 C5' A A1953 102.400 108.278 103.314 1.00 56.84 C
ATOM 7 C4' A A1953 102.172 109.643 102.726 1.00 56.04 C
ATOM 8 O4' A A1953 100.815 109.746 102.212 1.00 56.04 O
ATOM 9 C3' A A1953 102.346 110.806 103.695 1.00 54.93 C
ATOM 10 O3' A A1953 102.877 111.897 102.975 1.00 54.58 O
ATOM 11 C2' A A1953 100.910 111.124 104.103 1.00 54.77 C
ATOM 12 O2' A A1953 100.747 112.468 104.515 1.00 53.43 O
ATOM 13 C1' A A1953 100.174 110.863 102.792 1.00 54.85 C
ATOM 14 N9 A A1953 98.745 110.570 102.910 1.00 55.41 N
ATOM 15 C8 A A1953 98.131 109.478 103.475 1.00 55.74 C
ATOM 16 N7 A A1953 96.822 109.507 103.389 1.00 55.89 N
ATOM 17 C5 A A1953 96.557 110.701 102.730 1.00 56.35 C
ATOM 18 C6 A A1953 95.357 111.323 102.333 1.00 57.09 C
ATOM 19 N6 A A1953 94.143 110.814 102.557 1.00 58.87 N
ATOM 20 N1 A A1953 95.447 112.509 101.694 1.00 56.49 N
ATOM 21 C2 A A1953 96.654 113.027 101.481 1.00 55.51 C
ATOM 22 N3 A A1953 97.847 112.545 101.808 1.00 56.21 N
ATOM 23 C4 A A1953 97.729 111.365 102.436 1.00 55.45 C
ATOM 24 P U A1954 104.268 112.548 103.425 1.00 53.96 P
ATOM 25 OP1 U A1954 105.368 111.812 102.745 1.00 51.51 O
ATOM 26 OP2 U A1954 104.281 112.688 104.898 1.00 54.58 O
ATOM 27 O5' U A1954 104.146 114.021 102.847 1.00 52.93 O
TER
ATOM 1 O3' A B1953 102.877 111.897 102.975 1.00 54.58 O
ATOM 2 P U B1954 104.268 112.548 103.425 1.00 53.96 P
ATOM 3 OP1 U B1954 105.368 111.812 102.745 1.00 51.51 O
ATOM 4 OP2 U B1954 104.281 112.688 104.898 1.00 54.58 O
ATOM 5 O5' U B1954 104.146 114.021 102.847 1.00 52.93 O
ATOM 6 C5' U B1954 104.831 114.399 101.671 1.00 49.70 C
ATOM 7 C4' U B1954 105.366 115.789 101.828 1.00 49.38 C
ATOM 8 O4' U B1954 105.939 115.961 103.147 1.00 50.00 O
ATOM 9 C3' U B1954 106.498 116.073 100.873 1.00 48.91 C
ATOM 10 O3' U B1954 105.968 116.454 99.624 1.00 47.14 O
ATOM 11 C2' U B1954 107.273 117.161 101.594 1.00 50.35 C
ATOM 12 O2' U B1954 106.673 118.432 101.474 1.00 53.08 O
ATOM 13 C1' U B1954 107.146 116.697 103.049 1.00 51.42 C
ATOM 14 N1 U B1954 108.248 115.832 103.505 1.00 53.31 N
ATOM 15 C2 U B1954 109.535 116.350 103.498 1.00 53.95 C
ATOM 16 O2 U B1954 109.795 117.488 103.138 1.00 57.11 O
ATOM 17 N3 U B1954 110.507 115.488 103.934 1.00 53.81 N
ATOM 18 C4 U B1954 110.336 114.194 104.368 1.00 53.48 C
ATOM 19 O4 U B1954 111.318 113.537 104.709 1.00 54.84 O
ATOM 20 C5 U B1954 108.985 113.732 104.351 1.00 53.47 C
ATOM 21 C6 U B1954 108.013 114.542 103.930 1.00 52.94 C
ATOM 22 P G B1955 106.575 115.820 98.297 1.00 47.59 P
ATOM 23 OP1 G B1955 105.876 116.443 97.143 1.00 49.01 O
ATOM 24 OP2 G B1955 106.604 114.340 98.432 1.00 49.09 O
ATOM 25 O5' G B1955 108.070 116.352 98.324 1.00 49.45 O
TER
Atoms:
OP1: (99.861,106.534,104.191)
OP2: (102.171,105.769,105.031)
C3': (102.346,110.806,103.695)
C1': (100.174,110.863,102.792)
C5': (102.400,108.278,103.314)
O4': (100.815,109.746,102.212)
C8: (98.131,109.478,103.475)
O2': (100.747,112.468,104.515)
C6: (95.357,111.323,102.333)
C5: (96.557,110.701,102.730)
C4: (97.729,111.365,102.436)
P: (101.077,106.779,105.016)
C4': (102.172,109.643,102.726)
C2': (100.910,111.124,104.103)
C2: (96.654,113.027,101.481)
N1: (95.447,112.509,101.694)
N3: (97.847,112.545,101.808)
N6: (94.143,110.814,102.557)
N7: (96.822,109.507,103.389)
N9: (98.745,110.570,102.910)
O5': (101.707,108.164,104.558)
O3': (102.877,111.897,102.975)
OP2: (102.171,105.769,105.031)
C3': (102.346,110.806,103.695)
C1': (100.174,110.863,102.792)
C5': (102.400,108.278,103.314)
O4': (100.815,109.746,102.212)
C8: (98.131,109.478,103.475)
O2': (100.747,112.468,104.515)
C6: (95.357,111.323,102.333)
C5: (96.557,110.701,102.730)
C4: (97.729,111.365,102.436)
P: (101.077,106.779,105.016)
C4': (102.172,109.643,102.726)
C2': (100.910,111.124,104.103)
C2: (96.654,113.027,101.481)
N1: (95.447,112.509,101.694)
N3: (97.847,112.545,101.808)
N6: (94.143,110.814,102.557)
N7: (96.822,109.507,103.389)
N9: (98.745,110.570,102.910)
O5': (101.707,108.164,104.558)
O3': (102.877,111.897,102.975)
C4: (110.336,114.194,104.368)
N3: (110.507,115.488,103.934)
OP1: (105.368,111.812,102.745)
OP2: (104.281,112.688,104.898)
C2: (109.535,116.350,103.498)
C1': (107.146,116.697,103.049)
C3': (106.498,116.073,100.873)
O5': (104.146,114.021,102.847)
O4': (105.939,115.961,103.147)
C5': (104.831,114.399,101.671)
P: (104.268,112.548,103.425)
C4': (105.366,115.789,101.828)
C2': (107.273,117.161,101.594)
O2': (106.673,118.432,101.474)
N1: (108.248,115.832,103.505)
O4: (111.318,113.537,104.709)
O2: (109.795,117.488,103.138)
C6: (108.013,114.542,103.930)
C5: (108.985,113.732,104.351)
O3': (105.968,116.454,99.624)
N3: (110.507,115.488,103.934)
OP1: (105.368,111.812,102.745)
OP2: (104.281,112.688,104.898)
C2: (109.535,116.350,103.498)
C1': (107.146,116.697,103.049)
C3': (106.498,116.073,100.873)
O5': (104.146,114.021,102.847)
O4': (105.939,115.961,103.147)
C5': (104.831,114.399,101.671)
P: (104.268,112.548,103.425)
C4': (105.366,115.789,101.828)
C2': (107.273,117.161,101.594)
O2': (106.673,118.432,101.474)
N1: (108.248,115.832,103.505)
O4: (111.318,113.537,104.709)
O2: (109.795,117.488,103.138)
C6: (108.013,114.542,103.930)
C5: (108.985,113.732,104.351)
O3': (105.968,116.454,99.624)
Image (generated by PyMOL):