ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01953:01954

Extra

PDB:
ATOM 1 O3' C A1952 101.012 106.891 106.409 1.00 57.26 O
ATOM 2 P A A1953 101.491 106.629 104.893 1.00 61.21 P
ATOM 3 OP1 A A1953 100.302 106.430 104.016 1.00 59.71 O
ATOM 4 OP2 A A1953 102.562 105.590 104.938 1.00 60.60 O
ATOM 5 O5' A A1953 102.169 108.004 104.475 1.00 58.84 O
ATOM 6 C5' A A1953 102.820 108.140 103.212 1.00 56.06 C
ATOM 7 C4' A A1953 102.539 109.502 102.636 1.00 54.68 C
ATOM 8 O4' A A1953 101.175 109.568 102.136 1.00 54.68 O
ATOM 9 C3' A A1953 102.692 110.663 103.608 1.00 53.43 C
ATOM 10 O3' A A1953 103.177 111.768 102.883 1.00 54.37 O
ATOM 11 C2' A A1953 101.253 110.941 104.030 1.00 53.01 C
ATOM 12 O2' A A1953 101.053 112.277 104.452 1.00 50.27 O
ATOM 13 C1' A A1953 100.513 110.668 102.722 1.00 53.11 C
ATOM 14 N9 A A1953 99.096 110.337 102.864 1.00 52.54 N
ATOM 15 C8 A A1953 98.525 109.247 103.469 1.00 52.52 C
ATOM 16 N7 A A1953 97.214 109.244 103.419 1.00 52.66 N
ATOM 17 C5 A A1953 96.904 110.413 102.736 1.00 52.38 C
ATOM 18 C6 A A1953 95.681 110.998 102.362 1.00 52.42 C
ATOM 19 N6 A A1953 94.486 110.469 102.640 1.00 54.61 N
ATOM 20 N1 A A1953 95.724 112.166 101.689 1.00 51.20 N
ATOM 21 C2 A A1953 96.912 112.704 101.424 1.00 51.21 C
ATOM 22 N3 A A1953 98.125 112.257 101.726 1.00 52.62 N
ATOM 23 C4 A A1953 98.051 111.093 102.389 1.00 52.15 C
ATOM 24 P U A1954 104.581 112.425 103.274 1.00 53.94 P
ATOM 25 OP1 U A1954 105.662 111.671 102.576 1.00 53.04 O
ATOM 26 OP2 U A1954 104.639 112.606 104.741 1.00 53.67 O
ATOM 27 O5' U A1954 104.439 113.875 102.653 1.00 52.20 O
TER

ATOM 1 O3' A B1953 103.177 111.768 102.883 1.00 54.37 O
ATOM 2 P U B1954 104.581 112.425 103.274 1.00 53.94 P
ATOM 3 OP1 U B1954 105.662 111.671 102.576 1.00 53.04 O
ATOM 4 OP2 U B1954 104.639 112.606 104.741 1.00 53.67 O
ATOM 5 O5' U B1954 104.439 113.875 102.653 1.00 52.20 O
ATOM 6 C5' U B1954 105.180 114.250 101.512 1.00 49.40 C
ATOM 7 C4' U B1954 105.686 115.646 101.687 1.00 48.08 C
ATOM 8 O4' U B1954 106.252 115.800 103.009 1.00 47.26 O
ATOM 9 C3' U B1954 106.811 115.973 100.744 1.00 47.79 C
ATOM 10 O3' U B1954 106.277 116.367 99.506 1.00 47.47 O
ATOM 11 C2' U B1954 107.549 117.067 101.485 1.00 48.55 C
ATOM 12 O2' U B1954 106.889 118.311 101.378 1.00 50.77 O
ATOM 13 C1' U B1954 107.440 116.562 102.929 1.00 49.10 C
ATOM 14 N1 U B1954 108.557 115.708 103.370 1.00 49.73 N
ATOM 15 C2 U B1954 109.843 116.229 103.327 1.00 49.58 C
ATOM 16 O2 U B1954 110.094 117.360 102.943 1.00 51.24 O
ATOM 17 N3 U B1954 110.828 115.377 103.755 1.00 49.23 N
ATOM 18 C4 U B1954 110.672 114.090 104.216 1.00 49.49 C
ATOM 19 O4 U B1954 111.669 113.439 104.533 1.00 49.24 O
ATOM 20 C5 U B1954 109.320 113.622 104.237 1.00 50.07 C
ATOM 21 C6 U B1954 108.335 114.423 103.822 1.00 49.81 C
ATOM 22 P G B1955 106.825 115.685 98.178 1.00 49.72 P
ATOM 23 OP1 G B1955 106.096 116.284 97.031 1.00 50.84 O
ATOM 24 OP2 G B1955 106.843 114.203 98.357 1.00 48.05 O
ATOM 25 O5' G B1955 108.321 116.209 98.134 1.00 50.68 O
TER

Atoms:
OP1: (100.302,106.430,104.016)
OP2: (102.562,105.590,104.938)
C3': (102.692,110.663,103.608)
C1': (100.513,110.668,102.722)
C5': (102.820,108.140,103.212)
O4': (101.175,109.568,102.136)
C8: (98.525,109.247,103.469)
O2': (101.053,112.277,104.452)
C6: (95.681,110.998,102.362)
C5: (96.904,110.413,102.736)
C4: (98.051,111.093,102.389)
P: (101.491,106.629,104.893)
C4': (102.539,109.502,102.636)
C2': (101.253,110.941,104.030)
C2: (96.912,112.704,101.424)
N1: (95.724,112.166,101.689)
N3: (98.125,112.257,101.726)
N6: (94.486,110.469,102.640)
N7: (97.214,109.244,103.419)
N9: (99.096,110.337,102.864)
O5': (102.169,108.004,104.475)
O3': (103.177,111.768,102.883)
C4: (110.672,114.090,104.216)
N3: (110.828,115.377,103.755)
OP1: (105.662,111.671,102.576)
OP2: (104.639,112.606,104.741)
C2: (109.843,116.229,103.327)
C1': (107.440,116.562,102.929)
C3': (106.811,115.973,100.744)
O5': (104.439,113.875,102.653)
O4': (106.252,115.800,103.009)
C5': (105.180,114.250,101.512)
P: (104.581,112.425,103.274)
C4': (105.686,115.646,101.687)
C2': (107.549,117.067,101.485)
O2': (106.889,118.311,101.378)
N1: (108.557,115.708,103.370)
O4: (111.669,113.439,104.533)
O2: (110.094,117.360,102.943)
C6: (108.335,114.423,103.822)
C5: (109.320,113.622,104.237)
O3': (106.277,116.367,99.506)
Image (generated by PyMOL):
PyMOL image
show in jmol