Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0503:0506
Extra
PDB:
ATOM 1 O3' G A 502 33.393 150.127 63.101 1.00 83.06 O
ATOM 2 P C A 503 32.194 150.179 64.159 1.00 77.25 P
ATOM 3 OP1 C A 503 32.581 151.130 65.235 1.00 76.05 O
ATOM 4 OP2 C A 503 31.800 148.790 64.505 1.00 76.95 O
ATOM 5 O5' C A 503 31.016 150.865 63.342 1.00 73.48 O
ATOM 6 C5' C A 503 30.365 150.192 62.251 1.00 66.27 C
ATOM 7 C4' C A 503 29.035 150.850 61.977 1.00 62.50 C
ATOM 8 O4' C A 503 29.254 152.207 61.515 1.00 60.26 O
ATOM 9 C3' C A 503 28.162 150.225 60.904 1.00 59.84 C
ATOM 10 O3' C A 503 27.416 149.149 61.460 1.00 58.58 O
ATOM 11 C2' C A 503 27.258 151.392 60.537 1.00 58.31 C
ATOM 12 O2' C A 503 26.303 151.639 61.550 1.00 58.83 O
ATOM 13 C1' C A 503 28.243 152.557 60.588 1.00 57.90 C
ATOM 14 N1 C A 503 28.889 152.890 59.310 1.00 55.28 N
ATOM 15 C2 C A 503 28.349 153.906 58.531 1.00 54.78 C
ATOM 16 O2 C A 503 27.291 154.440 58.890 1.00 55.64 O
ATOM 17 N3 C A 503 28.987 154.281 57.403 1.00 54.80 N
ATOM 18 C4 C A 503 30.114 153.668 57.038 1.00 54.30 C
ATOM 19 N4 C A 503 30.736 154.097 55.935 1.00 53.89 N
ATOM 20 C5 C A 503 30.660 152.596 57.789 1.00 54.12 C
ATOM 21 C6 C A 503 30.021 152.241 58.906 1.00 55.37 C
ATOM 22 P A A 504 27.831 147.626 61.140 1.00 58.77 P
ATOM 23 OP1 A A 504 27.407 146.824 62.314 1.00 58.66 O
ATOM 24 OP2 A A 504 29.232 147.554 60.667 1.00 58.94 O
ATOM 25 O5' A A 504 26.953 147.211 59.884 1.00 55.89 O
TER
ATOM 1 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 2 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 3 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 4 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 5 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
ATOM 6 C5' G B 506 22.849 140.661 67.358 1.00 47.66 C
ATOM 7 C4' G B 506 24.270 140.691 67.850 1.00 46.34 C
ATOM 8 O4' G B 506 25.126 141.353 66.868 1.00 45.35 O
ATOM 9 C3' G B 506 24.458 141.469 69.152 1.00 45.61 C
ATOM 10 O3' G B 506 25.325 140.754 70.016 1.00 45.00 O
ATOM 11 C2' G B 506 25.145 142.746 68.686 1.00 44.59 C
ATOM 12 O2' G B 506 25.928 143.347 69.693 1.00 43.84 O
ATOM 13 C1' G B 506 26.008 142.193 67.561 1.00 44.99 C
ATOM 14 N9 G B 506 26.595 143.184 66.662 1.00 45.59 N
ATOM 15 C8 G B 506 26.032 144.354 66.202 1.00 46.19 C
ATOM 16 N7 G B 506 26.879 145.107 65.549 1.00 44.51 N
ATOM 17 C5 G B 506 28.057 144.372 65.546 1.00 45.98 C
ATOM 18 C6 G B 506 29.340 144.683 65.018 1.00 45.48 C
ATOM 19 O6 G B 506 29.712 145.715 64.440 1.00 47.05 O
ATOM 20 N1 G B 506 30.241 143.649 65.232 1.00 44.06 N
ATOM 21 C2 G B 506 29.956 142.471 65.874 1.00 45.31 C
ATOM 22 N2 G B 506 30.967 141.594 65.986 1.00 45.11 N
ATOM 23 N3 G B 506 28.774 142.172 66.376 1.00 44.87 N
ATOM 24 C4 G B 506 27.881 143.161 66.185 1.00 45.56 C
ATOM 25 P A B 507 25.119 140.855 71.601 1.00 45.12 P
ATOM 26 OP1 A B 507 23.698 141.151 71.903 1.00 45.31 O
ATOM 27 OP2 A B 507 26.176 141.768 72.101 1.00 44.51 O
ATOM 28 O5' A B 507 25.412 139.376 72.104 1.00 43.07 O
TER
ATOM 2 P C A 503 32.194 150.179 64.159 1.00 77.25 P
ATOM 3 OP1 C A 503 32.581 151.130 65.235 1.00 76.05 O
ATOM 4 OP2 C A 503 31.800 148.790 64.505 1.00 76.95 O
ATOM 5 O5' C A 503 31.016 150.865 63.342 1.00 73.48 O
ATOM 6 C5' C A 503 30.365 150.192 62.251 1.00 66.27 C
ATOM 7 C4' C A 503 29.035 150.850 61.977 1.00 62.50 C
ATOM 8 O4' C A 503 29.254 152.207 61.515 1.00 60.26 O
ATOM 9 C3' C A 503 28.162 150.225 60.904 1.00 59.84 C
ATOM 10 O3' C A 503 27.416 149.149 61.460 1.00 58.58 O
ATOM 11 C2' C A 503 27.258 151.392 60.537 1.00 58.31 C
ATOM 12 O2' C A 503 26.303 151.639 61.550 1.00 58.83 O
ATOM 13 C1' C A 503 28.243 152.557 60.588 1.00 57.90 C
ATOM 14 N1 C A 503 28.889 152.890 59.310 1.00 55.28 N
ATOM 15 C2 C A 503 28.349 153.906 58.531 1.00 54.78 C
ATOM 16 O2 C A 503 27.291 154.440 58.890 1.00 55.64 O
ATOM 17 N3 C A 503 28.987 154.281 57.403 1.00 54.80 N
ATOM 18 C4 C A 503 30.114 153.668 57.038 1.00 54.30 C
ATOM 19 N4 C A 503 30.736 154.097 55.935 1.00 53.89 N
ATOM 20 C5 C A 503 30.660 152.596 57.789 1.00 54.12 C
ATOM 21 C6 C A 503 30.021 152.241 58.906 1.00 55.37 C
ATOM 22 P A A 504 27.831 147.626 61.140 1.00 58.77 P
ATOM 23 OP1 A A 504 27.407 146.824 62.314 1.00 58.66 O
ATOM 24 OP2 A A 504 29.232 147.554 60.667 1.00 58.94 O
ATOM 25 O5' A A 504 26.953 147.211 59.884 1.00 55.89 O
TER
ATOM 1 O3' U B 505 21.316 141.620 65.027 1.00 45.43 O
ATOM 2 P G B 506 21.027 142.313 66.451 1.00 49.17 P
ATOM 3 OP1 G B 506 19.888 141.565 67.049 1.00 48.24 O
ATOM 4 OP2 G B 506 20.935 143.795 66.275 1.00 46.53 O
ATOM 5 O5' G B 506 22.310 141.986 67.329 1.00 47.99 O
ATOM 6 C5' G B 506 22.849 140.661 67.358 1.00 47.66 C
ATOM 7 C4' G B 506 24.270 140.691 67.850 1.00 46.34 C
ATOM 8 O4' G B 506 25.126 141.353 66.868 1.00 45.35 O
ATOM 9 C3' G B 506 24.458 141.469 69.152 1.00 45.61 C
ATOM 10 O3' G B 506 25.325 140.754 70.016 1.00 45.00 O
ATOM 11 C2' G B 506 25.145 142.746 68.686 1.00 44.59 C
ATOM 12 O2' G B 506 25.928 143.347 69.693 1.00 43.84 O
ATOM 13 C1' G B 506 26.008 142.193 67.561 1.00 44.99 C
ATOM 14 N9 G B 506 26.595 143.184 66.662 1.00 45.59 N
ATOM 15 C8 G B 506 26.032 144.354 66.202 1.00 46.19 C
ATOM 16 N7 G B 506 26.879 145.107 65.549 1.00 44.51 N
ATOM 17 C5 G B 506 28.057 144.372 65.546 1.00 45.98 C
ATOM 18 C6 G B 506 29.340 144.683 65.018 1.00 45.48 C
ATOM 19 O6 G B 506 29.712 145.715 64.440 1.00 47.05 O
ATOM 20 N1 G B 506 30.241 143.649 65.232 1.00 44.06 N
ATOM 21 C2 G B 506 29.956 142.471 65.874 1.00 45.31 C
ATOM 22 N2 G B 506 30.967 141.594 65.986 1.00 45.11 N
ATOM 23 N3 G B 506 28.774 142.172 66.376 1.00 44.87 N
ATOM 24 C4 G B 506 27.881 143.161 66.185 1.00 45.56 C
ATOM 25 P A B 507 25.119 140.855 71.601 1.00 45.12 P
ATOM 26 OP1 A B 507 23.698 141.151 71.903 1.00 45.31 O
ATOM 27 OP2 A B 507 26.176 141.768 72.101 1.00 44.51 O
ATOM 28 O5' A B 507 25.412 139.376 72.104 1.00 43.07 O
TER
Atoms:
C2: (28.349,153.906,58.531)
OP1: (32.581,151.130,65.235)
OP2: (31.800,148.790,64.505)
C4: (30.114,153.668,57.038)
O5': (31.016,150.865,63.342)
C3': (28.162,150.225,60.904)
C1': (28.243,152.557,60.588)
O4': (29.254,152.207,61.515)
C5': (30.365,150.192,62.251)
P: (32.194,150.179,64.159)
O2: (27.291,154.440,58.890)
C4': (29.035,150.850,61.977)
C2': (27.258,151.392,60.537)
O2': (26.303,151.639,61.550)
N1: (28.889,152.890,59.310)
N3: (28.987,154.281,57.403)
N4: (30.736,154.097,55.935)
C6: (30.021,152.241,58.906)
C5: (30.660,152.596,57.789)
O3': (27.416,149.149,61.460)
OP1: (32.581,151.130,65.235)
OP2: (31.800,148.790,64.505)
C4: (30.114,153.668,57.038)
O5': (31.016,150.865,63.342)
C3': (28.162,150.225,60.904)
C1': (28.243,152.557,60.588)
O4': (29.254,152.207,61.515)
C5': (30.365,150.192,62.251)
P: (32.194,150.179,64.159)
O2: (27.291,154.440,58.890)
C4': (29.035,150.850,61.977)
C2': (27.258,151.392,60.537)
O2': (26.303,151.639,61.550)
N1: (28.889,152.890,59.310)
N3: (28.987,154.281,57.403)
N4: (30.736,154.097,55.935)
C6: (30.021,152.241,58.906)
C5: (30.660,152.596,57.789)
O3': (27.416,149.149,61.460)
OP1: (19.888,141.565,67.049)
OP2: (20.935,143.795,66.275)
C3': (24.458,141.469,69.152)
C1': (26.008,142.193,67.561)
C5': (22.849,140.661,67.358)
O6: (29.712,145.715,64.440)
O4': (25.126,141.353,66.868)
C8: (26.032,144.354,66.202)
C2: (29.956,142.471,65.874)
C6: (29.340,144.683,65.018)
C5: (28.057,144.372,65.546)
C4: (27.881,143.161,66.185)
P: (21.027,142.313,66.451)
C4': (24.270,140.691,67.850)
C2': (25.145,142.746,68.686)
O2': (25.928,143.347,69.693)
N1: (30.241,143.649,65.232)
N2: (30.967,141.594,65.986)
N3: (28.774,142.172,66.376)
N7: (26.879,145.107,65.549)
N9: (26.595,143.184,66.662)
O5': (22.310,141.986,67.329)
O3': (25.325,140.754,70.016)
OP2: (20.935,143.795,66.275)
C3': (24.458,141.469,69.152)
C1': (26.008,142.193,67.561)
C5': (22.849,140.661,67.358)
O6: (29.712,145.715,64.440)
O4': (25.126,141.353,66.868)
C8: (26.032,144.354,66.202)
C2: (29.956,142.471,65.874)
C6: (29.340,144.683,65.018)
C5: (28.057,144.372,65.546)
C4: (27.881,143.161,66.185)
P: (21.027,142.313,66.451)
C4': (24.270,140.691,67.850)
C2': (25.145,142.746,68.686)
O2': (25.928,143.347,69.693)
N1: (30.241,143.649,65.232)
N2: (30.967,141.594,65.986)
N3: (28.774,142.172,66.376)
N7: (26.879,145.107,65.549)
N9: (26.595,143.184,66.662)
O5': (22.310,141.986,67.329)
O3': (25.325,140.754,70.016)
Image (generated by PyMOL):