ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:01953:01954

Extra

PDB:
ATOM 1 O3' C A1952 100.917 107.255 107.004 1.00 64.30 O
ATOM 2 P A A1953 101.440 106.963 105.513 1.00 66.41 P
ATOM 3 OP1 A A1953 100.274 106.757 104.610 1.00 65.62 O
ATOM 4 OP2 A A1953 102.495 105.912 105.617 1.00 65.98 O
ATOM 5 O5' A A1953 102.136 108.328 105.089 1.00 64.77 O
ATOM 6 C5' A A1953 102.798 108.454 103.826 1.00 62.11 C
ATOM 7 C4' A A1953 102.512 109.809 103.226 1.00 60.52 C
ATOM 8 O4' A A1953 101.160 109.854 102.691 1.00 60.61 O
ATOM 9 C3' A A1953 102.629 110.993 104.179 1.00 59.34 C
ATOM 10 O3' A A1953 103.069 112.104 103.429 1.00 59.30 O
ATOM 11 C2' A A1953 101.178 111.246 104.572 1.00 58.97 C
ATOM 12 O2' A A1953 100.954 112.582 104.973 1.00 57.94 O
ATOM 13 C1' A A1953 100.475 110.958 103.248 1.00 59.11 C
ATOM 14 N9 A A1953 99.049 110.636 103.332 1.00 57.96 N
ATOM 15 C8 A A1953 98.451 109.539 103.897 1.00 56.83 C
ATOM 16 N7 A A1953 97.148 109.536 103.783 1.00 56.96 N
ATOM 17 C5 A A1953 96.868 110.712 103.101 1.00 56.51 C
ATOM 18 C6 A A1953 95.667 111.290 102.665 1.00 57.16 C
ATOM 19 N6 A A1953 94.463 110.752 102.880 1.00 59.46 N
ATOM 20 N1 A A1953 95.740 112.461 101.997 1.00 55.93 N
ATOM 21 C2 A A1953 96.934 113.010 101.807 1.00 55.05 C
ATOM 22 N3 A A1953 98.128 112.571 102.177 1.00 56.11 N
ATOM 23 C4 A A1953 98.027 111.400 102.823 1.00 56.38 C
ATOM 24 P U A1954 104.524 112.711 103.677 1.00 57.90 P
ATOM 25 OP1 U A1954 105.506 111.868 102.954 1.00 56.63 O
ATOM 26 OP2 U A1954 104.701 112.969 105.122 1.00 57.28 O
ATOM 27 O5' U A1954 104.398 114.119 102.962 1.00 57.09 O
TER

ATOM 1 O3' A B1953 103.069 112.104 103.429 1.00 59.30 O
ATOM 2 P U B1954 104.524 112.711 103.677 1.00 57.90 P
ATOM 3 OP1 U B1954 105.506 111.868 102.954 1.00 56.63 O
ATOM 4 OP2 U B1954 104.701 112.969 105.122 1.00 57.28 O
ATOM 5 O5' U B1954 104.398 114.119 102.962 1.00 57.09 O
ATOM 6 C5' U B1954 105.282 114.487 101.925 1.00 56.13 C
ATOM 7 C4' U B1954 105.785 115.875 102.169 1.00 55.78 C
ATOM 8 O4' U B1954 106.327 115.986 103.506 1.00 56.75 O
ATOM 9 C3' U B1954 106.930 116.235 101.266 1.00 55.33 C
ATOM 10 O3' U B1954 106.405 116.651 100.033 1.00 55.23 O
ATOM 11 C2' U B1954 107.637 117.319 102.055 1.00 56.44 C
ATOM 12 O2' U B1954 106.963 118.557 101.987 1.00 57.91 O
ATOM 13 C1' U B1954 107.504 116.772 103.479 1.00 57.53 C
ATOM 14 N1 U B1954 108.629 115.931 103.932 1.00 60.52 N
ATOM 15 C2 U B1954 109.911 116.456 103.872 1.00 61.14 C
ATOM 16 O2 U B1954 110.153 117.579 103.465 1.00 62.80 O
ATOM 17 N3 U B1954 110.902 115.616 104.313 1.00 61.71 N
ATOM 18 C4 U B1954 110.754 114.338 104.803 1.00 61.81 C
ATOM 19 O4 U B1954 111.753 113.696 105.126 1.00 62.56 O
ATOM 20 C5 U B1954 109.408 113.867 104.841 1.00 61.80 C
ATOM 21 C6 U B1954 108.417 114.654 104.413 1.00 61.29 C
ATOM 22 P G B1955 106.907 115.940 98.701 1.00 56.50 P
ATOM 23 OP1 G B1955 106.151 116.508 97.556 1.00 56.57 O
ATOM 24 OP2 G B1955 106.928 114.460 98.919 1.00 55.13 O
ATOM 25 O5' G B1955 108.393 116.481 98.604 1.00 57.08 O
TER

Atoms:
OP1: (100.274,106.757,104.610)
OP2: (102.495,105.912,105.617)
C3': (102.629,110.993,104.179)
C1': (100.475,110.958,103.248)
C5': (102.798,108.454,103.826)
O4': (101.160,109.854,102.691)
C8: (98.451,109.539,103.897)
O2': (100.954,112.582,104.973)
C6: (95.667,111.290,102.665)
C5: (96.868,110.712,103.101)
C4: (98.027,111.400,102.823)
P: (101.440,106.963,105.513)
C4': (102.512,109.809,103.226)
C2': (101.178,111.246,104.572)
C2: (96.934,113.010,101.807)
N1: (95.740,112.461,101.997)
N3: (98.128,112.571,102.177)
N6: (94.463,110.752,102.880)
N7: (97.148,109.536,103.783)
N9: (99.049,110.636,103.332)
O5': (102.136,108.328,105.089)
O3': (103.069,112.104,103.429)
C4: (110.754,114.338,104.803)
N3: (110.902,115.616,104.313)
OP1: (105.506,111.868,102.954)
OP2: (104.701,112.969,105.122)
C2: (109.911,116.456,103.872)
C1': (107.504,116.772,103.479)
C3': (106.930,116.235,101.266)
O5': (104.398,114.119,102.962)
O4': (106.327,115.986,103.506)
C5': (105.282,114.487,101.925)
P: (104.524,112.711,103.677)
C4': (105.785,115.875,102.169)
C2': (107.637,117.319,102.055)
O2': (106.963,118.557,101.987)
N1: (108.629,115.931,103.932)
O4: (111.753,113.696,105.126)
O2: (110.153,117.579,103.465)
C6: (108.417,114.654,104.413)
C5: (109.408,113.867,104.841)
O3': (106.405,116.651,100.033)
Image (generated by PyMOL):
PyMOL image
show in jmol