Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0503:0506
Extra
PDB:
ATOM 1 O3' G A 502 33.190 149.667 62.806 1.00 74.89 O
ATOM 2 P C A 503 31.999 149.694 63.869 1.00 68.35 P
ATOM 3 OP1 C A 503 32.407 150.565 65.001 1.00 66.89 O
ATOM 4 OP2 C A 503 31.570 148.295 64.125 1.00 67.10 O
ATOM 5 O5' C A 503 30.851 150.464 63.090 1.00 67.15 O
ATOM 6 C5' C A 503 30.214 149.892 61.941 1.00 62.04 C
ATOM 7 C4' C A 503 28.904 150.594 61.697 1.00 58.54 C
ATOM 8 O4' C A 503 29.159 151.952 61.262 1.00 56.21 O
ATOM 9 C3' C A 503 28.017 150.016 60.613 1.00 56.34 C
ATOM 10 O3' C A 503 27.252 148.951 61.159 1.00 54.61 O
ATOM 11 C2' C A 503 27.135 151.212 60.280 1.00 55.60 C
ATOM 12 O2' C A 503 26.168 151.452 61.285 1.00 56.75 O
ATOM 13 C1' C A 503 28.144 152.355 60.365 1.00 54.41 C
ATOM 14 N1 C A 503 28.768 152.713 59.084 1.00 51.78 N
ATOM 15 C2 C A 503 28.140 153.658 58.279 1.00 51.01 C
ATOM 16 O2 C A 503 27.051 154.120 58.637 1.00 52.35 O
ATOM 17 N3 C A 503 28.729 154.046 57.130 1.00 49.98 N
ATOM 18 C4 C A 503 29.895 153.517 56.770 1.00 49.99 C
ATOM 19 N4 C A 503 30.453 153.950 55.642 1.00 50.40 N
ATOM 20 C5 C A 503 30.545 152.524 57.554 1.00 50.86 C
ATOM 21 C6 C A 503 29.951 152.153 58.693 1.00 51.69 C
ATOM 22 P A A 504 27.642 147.425 60.834 1.00 53.22 P
ATOM 23 OP1 A A 504 27.110 146.612 61.956 1.00 54.15 O
ATOM 24 OP2 A A 504 29.080 147.334 60.483 1.00 52.60 O
ATOM 25 O5' A A 504 26.803 147.069 59.532 1.00 50.24 O
TER
ATOM 1 O3' U B 505 21.110 141.459 64.655 1.00 37.56 O
ATOM 2 P G B 506 20.881 142.186 66.067 1.00 40.64 P
ATOM 3 OP1 G B 506 19.779 141.474 66.749 1.00 38.59 O
ATOM 4 OP2 G B 506 20.783 143.651 65.833 1.00 38.59 O
ATOM 5 O5' G B 506 22.215 141.877 66.872 1.00 41.35 O
ATOM 6 C5' G B 506 22.685 140.527 66.994 1.00 42.61 C
ATOM 7 C4' G B 506 24.067 140.501 67.593 1.00 42.09 C
ATOM 8 O4' G B 506 25.032 141.061 66.649 1.00 40.91 O
ATOM 9 C3' G B 506 24.230 141.292 68.891 1.00 41.16 C
ATOM 10 O3' G B 506 25.090 140.574 69.768 1.00 40.55 O
ATOM 11 C2' G B 506 24.921 142.563 68.409 1.00 40.80 C
ATOM 12 O2' G B 506 25.663 143.260 69.392 1.00 39.86 O
ATOM 13 C1' G B 506 25.837 141.984 67.337 1.00 40.53 C
ATOM 14 N9 G B 506 26.400 142.962 66.416 1.00 40.57 N
ATOM 15 C8 G B 506 25.816 144.117 65.952 1.00 41.28 C
ATOM 16 N7 G B 506 26.642 144.872 65.281 1.00 41.30 N
ATOM 17 C5 G B 506 27.829 144.155 65.273 1.00 41.19 C
ATOM 18 C6 G B 506 29.094 144.483 64.732 1.00 40.13 C
ATOM 19 O6 G B 506 29.439 145.521 64.165 1.00 39.27 O
ATOM 20 N1 G B 506 30.013 143.456 64.923 1.00 41.13 N
ATOM 21 C2 G B 506 29.751 142.269 65.561 1.00 41.86 C
ATOM 22 N2 G B 506 30.758 141.392 65.625 1.00 40.96 N
ATOM 23 N3 G B 506 28.583 141.964 66.095 1.00 42.33 N
ATOM 24 C4 G B 506 27.676 142.948 65.919 1.00 41.85 C
ATOM 25 P A B 507 24.841 140.631 71.349 1.00 40.37 P
ATOM 26 OP1 A B 507 23.405 140.871 71.601 1.00 42.51 O
ATOM 27 OP2 A B 507 25.844 141.550 71.936 1.00 41.33 O
ATOM 28 O5' A B 507 25.160 139.151 71.824 1.00 39.39 O
TER
ATOM 2 P C A 503 31.999 149.694 63.869 1.00 68.35 P
ATOM 3 OP1 C A 503 32.407 150.565 65.001 1.00 66.89 O
ATOM 4 OP2 C A 503 31.570 148.295 64.125 1.00 67.10 O
ATOM 5 O5' C A 503 30.851 150.464 63.090 1.00 67.15 O
ATOM 6 C5' C A 503 30.214 149.892 61.941 1.00 62.04 C
ATOM 7 C4' C A 503 28.904 150.594 61.697 1.00 58.54 C
ATOM 8 O4' C A 503 29.159 151.952 61.262 1.00 56.21 O
ATOM 9 C3' C A 503 28.017 150.016 60.613 1.00 56.34 C
ATOM 10 O3' C A 503 27.252 148.951 61.159 1.00 54.61 O
ATOM 11 C2' C A 503 27.135 151.212 60.280 1.00 55.60 C
ATOM 12 O2' C A 503 26.168 151.452 61.285 1.00 56.75 O
ATOM 13 C1' C A 503 28.144 152.355 60.365 1.00 54.41 C
ATOM 14 N1 C A 503 28.768 152.713 59.084 1.00 51.78 N
ATOM 15 C2 C A 503 28.140 153.658 58.279 1.00 51.01 C
ATOM 16 O2 C A 503 27.051 154.120 58.637 1.00 52.35 O
ATOM 17 N3 C A 503 28.729 154.046 57.130 1.00 49.98 N
ATOM 18 C4 C A 503 29.895 153.517 56.770 1.00 49.99 C
ATOM 19 N4 C A 503 30.453 153.950 55.642 1.00 50.40 N
ATOM 20 C5 C A 503 30.545 152.524 57.554 1.00 50.86 C
ATOM 21 C6 C A 503 29.951 152.153 58.693 1.00 51.69 C
ATOM 22 P A A 504 27.642 147.425 60.834 1.00 53.22 P
ATOM 23 OP1 A A 504 27.110 146.612 61.956 1.00 54.15 O
ATOM 24 OP2 A A 504 29.080 147.334 60.483 1.00 52.60 O
ATOM 25 O5' A A 504 26.803 147.069 59.532 1.00 50.24 O
TER
ATOM 1 O3' U B 505 21.110 141.459 64.655 1.00 37.56 O
ATOM 2 P G B 506 20.881 142.186 66.067 1.00 40.64 P
ATOM 3 OP1 G B 506 19.779 141.474 66.749 1.00 38.59 O
ATOM 4 OP2 G B 506 20.783 143.651 65.833 1.00 38.59 O
ATOM 5 O5' G B 506 22.215 141.877 66.872 1.00 41.35 O
ATOM 6 C5' G B 506 22.685 140.527 66.994 1.00 42.61 C
ATOM 7 C4' G B 506 24.067 140.501 67.593 1.00 42.09 C
ATOM 8 O4' G B 506 25.032 141.061 66.649 1.00 40.91 O
ATOM 9 C3' G B 506 24.230 141.292 68.891 1.00 41.16 C
ATOM 10 O3' G B 506 25.090 140.574 69.768 1.00 40.55 O
ATOM 11 C2' G B 506 24.921 142.563 68.409 1.00 40.80 C
ATOM 12 O2' G B 506 25.663 143.260 69.392 1.00 39.86 O
ATOM 13 C1' G B 506 25.837 141.984 67.337 1.00 40.53 C
ATOM 14 N9 G B 506 26.400 142.962 66.416 1.00 40.57 N
ATOM 15 C8 G B 506 25.816 144.117 65.952 1.00 41.28 C
ATOM 16 N7 G B 506 26.642 144.872 65.281 1.00 41.30 N
ATOM 17 C5 G B 506 27.829 144.155 65.273 1.00 41.19 C
ATOM 18 C6 G B 506 29.094 144.483 64.732 1.00 40.13 C
ATOM 19 O6 G B 506 29.439 145.521 64.165 1.00 39.27 O
ATOM 20 N1 G B 506 30.013 143.456 64.923 1.00 41.13 N
ATOM 21 C2 G B 506 29.751 142.269 65.561 1.00 41.86 C
ATOM 22 N2 G B 506 30.758 141.392 65.625 1.00 40.96 N
ATOM 23 N3 G B 506 28.583 141.964 66.095 1.00 42.33 N
ATOM 24 C4 G B 506 27.676 142.948 65.919 1.00 41.85 C
ATOM 25 P A B 507 24.841 140.631 71.349 1.00 40.37 P
ATOM 26 OP1 A B 507 23.405 140.871 71.601 1.00 42.51 O
ATOM 27 OP2 A B 507 25.844 141.550 71.936 1.00 41.33 O
ATOM 28 O5' A B 507 25.160 139.151 71.824 1.00 39.39 O
TER
Atoms:
C2: (28.140,153.658,58.279)
OP1: (32.407,150.565,65.001)
OP2: (31.570,148.295,64.125)
C4: (29.895,153.517,56.770)
O5': (30.851,150.464,63.090)
C3': (28.017,150.016,60.613)
C1': (28.144,152.355,60.365)
O4': (29.159,151.952,61.262)
C5': (30.214,149.892,61.941)
P: (31.999,149.694,63.869)
O2: (27.051,154.120,58.637)
C4': (28.904,150.594,61.697)
C2': (27.135,151.212,60.280)
O2': (26.168,151.452,61.285)
N1: (28.768,152.713,59.084)
N3: (28.729,154.046,57.130)
N4: (30.453,153.950,55.642)
C6: (29.951,152.153,58.693)
C5: (30.545,152.524,57.554)
O3': (27.252,148.951,61.159)
OP1: (32.407,150.565,65.001)
OP2: (31.570,148.295,64.125)
C4: (29.895,153.517,56.770)
O5': (30.851,150.464,63.090)
C3': (28.017,150.016,60.613)
C1': (28.144,152.355,60.365)
O4': (29.159,151.952,61.262)
C5': (30.214,149.892,61.941)
P: (31.999,149.694,63.869)
O2: (27.051,154.120,58.637)
C4': (28.904,150.594,61.697)
C2': (27.135,151.212,60.280)
O2': (26.168,151.452,61.285)
N1: (28.768,152.713,59.084)
N3: (28.729,154.046,57.130)
N4: (30.453,153.950,55.642)
C6: (29.951,152.153,58.693)
C5: (30.545,152.524,57.554)
O3': (27.252,148.951,61.159)
OP1: (19.779,141.474,66.749)
OP2: (20.783,143.651,65.833)
C3': (24.230,141.292,68.891)
C1': (25.837,141.984,67.337)
C5': (22.685,140.527,66.994)
O6: (29.439,145.521,64.165)
O4': (25.032,141.061,66.649)
C8: (25.816,144.117,65.952)
C2: (29.751,142.269,65.561)
C6: (29.094,144.483,64.732)
C5: (27.829,144.155,65.273)
C4: (27.676,142.948,65.919)
P: (20.881,142.186,66.067)
C4': (24.067,140.501,67.593)
C2': (24.921,142.563,68.409)
O2': (25.663,143.260,69.392)
N1: (30.013,143.456,64.923)
N2: (30.758,141.392,65.625)
N3: (28.583,141.964,66.095)
N7: (26.642,144.872,65.281)
N9: (26.400,142.962,66.416)
O5': (22.215,141.877,66.872)
O3': (25.090,140.574,69.768)
OP2: (20.783,143.651,65.833)
C3': (24.230,141.292,68.891)
C1': (25.837,141.984,67.337)
C5': (22.685,140.527,66.994)
O6: (29.439,145.521,64.165)
O4': (25.032,141.061,66.649)
C8: (25.816,144.117,65.952)
C2: (29.751,142.269,65.561)
C6: (29.094,144.483,64.732)
C5: (27.829,144.155,65.273)
C4: (27.676,142.948,65.919)
P: (20.881,142.186,66.067)
C4': (24.067,140.501,67.593)
C2': (24.921,142.563,68.409)
O2': (25.663,143.260,69.392)
N1: (30.013,143.456,64.923)
N2: (30.758,141.392,65.625)
N3: (28.583,141.964,66.095)
N7: (26.642,144.872,65.281)
N9: (26.400,142.962,66.416)
O5': (22.215,141.877,66.872)
O3': (25.090,140.574,69.768)
Image (generated by PyMOL):