ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:01953:01954

Extra

PDB:
ATOM 1 O3' C A1952 100.984 106.994 106.638 1.00 67.17 O
ATOM 2 P A A1953 101.421 106.654 105.128 1.00 70.12 P
ATOM 3 OP1 A A1953 100.225 106.248 104.339 1.00 69.11 O
ATOM 4 OP2 A A1953 102.599 105.739 105.216 1.00 70.15 O
ATOM 5 O5' A A1953 101.906 108.056 104.558 1.00 67.62 O
ATOM 6 C5' A A1953 102.601 108.139 103.315 1.00 65.45 C
ATOM 7 C4' A A1953 102.388 109.494 102.700 1.00 64.27 C
ATOM 8 O4' A A1953 101.030 109.594 102.194 1.00 63.64 O
ATOM 9 C3' A A1953 102.578 110.671 103.648 1.00 63.66 C
ATOM 10 O3' A A1953 103.113 111.760 102.916 1.00 63.82 O
ATOM 11 C2' A A1953 101.149 110.987 104.077 1.00 63.34 C
ATOM 12 O2' A A1953 100.976 112.331 104.488 1.00 62.07 O
ATOM 13 C1' A A1953 100.386 110.705 102.784 1.00 63.09 C
ATOM 14 N9 A A1953 98.975 110.372 102.965 1.00 62.14 N
ATOM 15 C8 A A1953 98.437 109.270 103.577 1.00 62.25 C
ATOM 16 N7 A A1953 97.129 109.248 103.567 1.00 62.13 N
ATOM 17 C5 A A1953 96.782 110.417 102.909 1.00 61.36 C
ATOM 18 C6 A A1953 95.544 110.980 102.580 1.00 61.59 C
ATOM 19 N6 A A1953 94.369 110.423 102.889 1.00 62.43 N
ATOM 20 N1 A A1953 95.546 112.154 101.917 1.00 61.86 N
ATOM 21 C2 A A1953 96.717 112.717 101.620 1.00 61.38 C
ATOM 22 N3 A A1953 97.943 112.289 101.882 1.00 61.81 N
ATOM 23 C4 A A1953 97.907 111.118 102.534 1.00 61.35 C
ATOM 24 P U A1954 104.424 112.510 103.449 1.00 63.03 P
ATOM 25 OP1 U A1954 105.621 111.787 102.928 1.00 61.38 O
ATOM 26 OP2 U A1954 104.278 112.740 104.906 1.00 64.23 O
ATOM 27 O5' U A1954 104.302 113.938 102.772 1.00 61.70 O
TER

ATOM 1 O3' A B1953 103.113 111.760 102.916 1.00 63.82 O
ATOM 2 P U B1954 104.424 112.510 103.449 1.00 63.03 P
ATOM 3 OP1 U B1954 105.621 111.787 102.928 1.00 61.38 O
ATOM 4 OP2 U B1954 104.278 112.740 104.906 1.00 64.23 O
ATOM 5 O5' U B1954 104.302 113.938 102.772 1.00 61.70 O
ATOM 6 C5' U B1954 105.099 114.283 101.654 1.00 59.85 C
ATOM 7 C4' U B1954 105.600 115.685 101.811 1.00 57.91 C
ATOM 8 O4' U B1954 106.181 115.853 103.126 1.00 57.38 O
ATOM 9 C3' U B1954 106.708 116.027 100.848 1.00 57.43 C
ATOM 10 O3' U B1954 106.152 116.423 99.610 1.00 56.10 O
ATOM 11 C2' U B1954 107.443 117.137 101.579 1.00 59.20 C
ATOM 12 O2' U B1954 106.794 118.386 101.460 1.00 61.97 O
ATOM 13 C1' U B1954 107.347 116.652 103.031 1.00 59.14 C
ATOM 14 N1 U B1954 108.493 115.846 103.489 1.00 60.11 N
ATOM 15 C2 U B1954 109.757 116.425 103.471 1.00 60.02 C
ATOM 16 O2 U B1954 109.963 117.572 103.102 1.00 60.67 O
ATOM 17 N3 U B1954 110.772 115.610 103.904 1.00 59.53 N
ATOM 18 C4 U B1954 110.665 114.310 104.345 1.00 59.61 C
ATOM 19 O4 U B1954 111.684 113.696 104.664 1.00 59.79 O
ATOM 20 C5 U B1954 109.337 113.786 104.345 1.00 60.19 C
ATOM 21 C6 U B1954 108.323 114.548 103.928 1.00 60.33 C
ATOM 22 P G B1955 106.724 115.795 98.260 1.00 56.52 P
ATOM 23 OP1 G B1955 106.006 116.416 97.117 1.00 56.57 O
ATOM 24 OP2 G B1955 106.751 114.312 98.395 1.00 55.70 O
ATOM 25 O5' G B1955 108.220 116.328 98.255 1.00 58.05 O
TER

Atoms:
OP1: (100.225,106.248,104.339)
OP2: (102.599,105.739,105.216)
C3': (102.578,110.671,103.648)
C1': (100.386,110.705,102.784)
C5': (102.601,108.139,103.315)
O4': (101.030,109.594,102.194)
C8: (98.437,109.270,103.577)
O2': (100.976,112.331,104.488)
C6: (95.544,110.980,102.580)
C5: (96.782,110.417,102.909)
C4: (97.907,111.118,102.534)
P: (101.421,106.654,105.128)
C4': (102.388,109.494,102.700)
C2': (101.149,110.987,104.077)
C2: (96.717,112.717,101.620)
N1: (95.546,112.154,101.917)
N3: (97.943,112.289,101.882)
N6: (94.369,110.423,102.889)
N7: (97.129,109.248,103.567)
N9: (98.975,110.372,102.965)
O5': (101.906,108.056,104.558)
O3': (103.113,111.760,102.916)
C4: (110.665,114.310,104.345)
N3: (110.772,115.610,103.904)
OP1: (105.621,111.787,102.928)
OP2: (104.278,112.740,104.906)
C2: (109.757,116.425,103.471)
C1': (107.347,116.652,103.031)
C3': (106.708,116.027,100.848)
O5': (104.302,113.938,102.772)
O4': (106.181,115.853,103.126)
C5': (105.099,114.283,101.654)
P: (104.424,112.510,103.449)
C4': (105.600,115.685,101.811)
C2': (107.443,117.137,101.579)
O2': (106.794,118.386,101.460)
N1: (108.493,115.846,103.489)
O4: (111.684,113.696,104.664)
O2: (109.963,117.572,103.102)
C6: (108.323,114.548,103.928)
C5: (109.337,113.786,104.345)
O3': (106.152,116.423,99.610)
Image (generated by PyMOL):
PyMOL image
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