Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0503:0506
Extra
PDB:
ATOM 1 O3' G A 502 33.179 149.467 62.875 1.00 71.11 O
ATOM 2 P C A 503 31.911 149.463 63.863 1.00 64.51 P
ATOM 3 OP1 C A 503 32.259 150.307 65.036 1.00 63.85 O
ATOM 4 OP2 C A 503 31.479 148.052 64.070 1.00 63.37 O
ATOM 5 O5' C A 503 30.789 150.238 63.040 1.00 60.54 O
ATOM 6 C5' C A 503 30.065 149.601 61.975 1.00 54.58 C
ATOM 7 C4' C A 503 28.755 150.315 61.752 1.00 50.97 C
ATOM 8 O4' C A 503 29.015 151.673 61.326 1.00 48.40 O
ATOM 9 C3' C A 503 27.849 149.747 60.673 1.00 48.62 C
ATOM 10 O3' C A 503 27.041 148.721 61.224 1.00 47.95 O
ATOM 11 C2' C A 503 26.988 150.949 60.320 1.00 47.19 C
ATOM 12 O2' C A 503 25.985 151.176 61.290 1.00 46.33 O
ATOM 13 C1' C A 503 28.007 152.084 60.424 1.00 45.96 C
ATOM 14 N1 C A 503 28.647 152.444 59.153 1.00 42.63 N
ATOM 15 C2 C A 503 28.087 153.461 58.390 1.00 41.48 C
ATOM 16 O2 C A 503 27.042 153.995 58.781 1.00 41.28 O
ATOM 17 N3 C A 503 28.692 153.840 57.245 1.00 40.50 N
ATOM 18 C4 C A 503 29.812 153.234 56.854 1.00 41.01 C
ATOM 19 N4 C A 503 30.393 153.659 55.733 1.00 40.66 N
ATOM 20 C5 C A 503 30.391 152.171 57.599 1.00 41.83 C
ATOM 21 C6 C A 503 29.780 151.809 58.730 1.00 42.21 C
ATOM 22 P A A 504 27.453 147.183 61.037 1.00 46.96 P
ATOM 23 OP1 A A 504 26.966 146.463 62.240 1.00 48.39 O
ATOM 24 OP2 A A 504 28.883 147.096 60.662 1.00 46.17 O
ATOM 25 O5' A A 504 26.600 146.703 59.785 1.00 45.06 O
TER
ATOM 1 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 2 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 3 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 4 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 5 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
ATOM 6 C5' G B 506 22.538 140.343 67.010 1.00 34.00 C
ATOM 7 C4' G B 506 23.920 140.360 67.603 1.00 33.55 C
ATOM 8 O4' G B 506 24.842 140.970 66.653 1.00 32.89 O
ATOM 9 C3' G B 506 24.071 141.154 68.904 1.00 33.02 C
ATOM 10 O3' G B 506 24.957 140.445 69.760 1.00 35.11 O
ATOM 11 C2' G B 506 24.763 142.429 68.430 1.00 32.08 C
ATOM 12 O2' G B 506 25.522 143.078 69.427 1.00 30.58 O
ATOM 13 C1' G B 506 25.676 141.852 67.357 1.00 32.31 C
ATOM 14 N9 G B 506 26.283 142.811 66.442 1.00 33.02 N
ATOM 15 C8 G B 506 25.737 143.973 65.951 1.00 34.32 C
ATOM 16 N7 G B 506 26.582 144.675 65.246 1.00 34.29 N
ATOM 17 C5 G B 506 27.747 143.919 65.255 1.00 35.21 C
ATOM 18 C6 G B 506 29.017 144.178 64.684 1.00 36.18 C
ATOM 19 O6 G B 506 29.390 145.175 64.055 1.00 39.09 O
ATOM 20 N1 G B 506 29.905 143.134 64.919 1.00 34.69 N
ATOM 21 C2 G B 506 29.616 141.998 65.619 1.00 34.44 C
ATOM 22 N2 G B 506 30.602 141.106 65.730 1.00 33.72 N
ATOM 23 N3 G B 506 28.445 141.751 66.172 1.00 35.38 N
ATOM 24 C4 G B 506 27.564 142.749 65.956 1.00 34.56 C
ATOM 25 P A B 507 24.714 140.443 71.347 1.00 37.37 P
ATOM 26 OP1 A B 507 23.271 140.675 71.629 1.00 36.65 O
ATOM 27 OP2 A B 507 25.736 141.333 71.964 1.00 35.89 O
ATOM 28 O5' A B 507 25.053 138.943 71.752 1.00 36.87 O
TER
ATOM 2 P C A 503 31.911 149.463 63.863 1.00 64.51 P
ATOM 3 OP1 C A 503 32.259 150.307 65.036 1.00 63.85 O
ATOM 4 OP2 C A 503 31.479 148.052 64.070 1.00 63.37 O
ATOM 5 O5' C A 503 30.789 150.238 63.040 1.00 60.54 O
ATOM 6 C5' C A 503 30.065 149.601 61.975 1.00 54.58 C
ATOM 7 C4' C A 503 28.755 150.315 61.752 1.00 50.97 C
ATOM 8 O4' C A 503 29.015 151.673 61.326 1.00 48.40 O
ATOM 9 C3' C A 503 27.849 149.747 60.673 1.00 48.62 C
ATOM 10 O3' C A 503 27.041 148.721 61.224 1.00 47.95 O
ATOM 11 C2' C A 503 26.988 150.949 60.320 1.00 47.19 C
ATOM 12 O2' C A 503 25.985 151.176 61.290 1.00 46.33 O
ATOM 13 C1' C A 503 28.007 152.084 60.424 1.00 45.96 C
ATOM 14 N1 C A 503 28.647 152.444 59.153 1.00 42.63 N
ATOM 15 C2 C A 503 28.087 153.461 58.390 1.00 41.48 C
ATOM 16 O2 C A 503 27.042 153.995 58.781 1.00 41.28 O
ATOM 17 N3 C A 503 28.692 153.840 57.245 1.00 40.50 N
ATOM 18 C4 C A 503 29.812 153.234 56.854 1.00 41.01 C
ATOM 19 N4 C A 503 30.393 153.659 55.733 1.00 40.66 N
ATOM 20 C5 C A 503 30.391 152.171 57.599 1.00 41.83 C
ATOM 21 C6 C A 503 29.780 151.809 58.730 1.00 42.21 C
ATOM 22 P A A 504 27.453 147.183 61.037 1.00 46.96 P
ATOM 23 OP1 A A 504 26.966 146.463 62.240 1.00 48.39 O
ATOM 24 OP2 A A 504 28.883 147.096 60.662 1.00 46.17 O
ATOM 25 O5' A A 504 26.600 146.703 59.785 1.00 45.06 O
TER
ATOM 1 O3' U B 505 20.852 141.296 64.718 1.00 32.24 O
ATOM 2 P G B 506 20.649 141.948 66.164 1.00 33.76 P
ATOM 3 OP1 G B 506 19.590 141.163 66.844 1.00 31.28 O
ATOM 4 OP2 G B 506 20.494 143.420 66.001 1.00 33.84 O
ATOM 5 O5' G B 506 22.028 141.675 66.901 1.00 34.04 O
ATOM 6 C5' G B 506 22.538 140.343 67.010 1.00 34.00 C
ATOM 7 C4' G B 506 23.920 140.360 67.603 1.00 33.55 C
ATOM 8 O4' G B 506 24.842 140.970 66.653 1.00 32.89 O
ATOM 9 C3' G B 506 24.071 141.154 68.904 1.00 33.02 C
ATOM 10 O3' G B 506 24.957 140.445 69.760 1.00 35.11 O
ATOM 11 C2' G B 506 24.763 142.429 68.430 1.00 32.08 C
ATOM 12 O2' G B 506 25.522 143.078 69.427 1.00 30.58 O
ATOM 13 C1' G B 506 25.676 141.852 67.357 1.00 32.31 C
ATOM 14 N9 G B 506 26.283 142.811 66.442 1.00 33.02 N
ATOM 15 C8 G B 506 25.737 143.973 65.951 1.00 34.32 C
ATOM 16 N7 G B 506 26.582 144.675 65.246 1.00 34.29 N
ATOM 17 C5 G B 506 27.747 143.919 65.255 1.00 35.21 C
ATOM 18 C6 G B 506 29.017 144.178 64.684 1.00 36.18 C
ATOM 19 O6 G B 506 29.390 145.175 64.055 1.00 39.09 O
ATOM 20 N1 G B 506 29.905 143.134 64.919 1.00 34.69 N
ATOM 21 C2 G B 506 29.616 141.998 65.619 1.00 34.44 C
ATOM 22 N2 G B 506 30.602 141.106 65.730 1.00 33.72 N
ATOM 23 N3 G B 506 28.445 141.751 66.172 1.00 35.38 N
ATOM 24 C4 G B 506 27.564 142.749 65.956 1.00 34.56 C
ATOM 25 P A B 507 24.714 140.443 71.347 1.00 37.37 P
ATOM 26 OP1 A B 507 23.271 140.675 71.629 1.00 36.65 O
ATOM 27 OP2 A B 507 25.736 141.333 71.964 1.00 35.89 O
ATOM 28 O5' A B 507 25.053 138.943 71.752 1.00 36.87 O
TER
Atoms:
C2: (28.087,153.461,58.390)
OP1: (32.259,150.307,65.036)
OP2: (31.479,148.052,64.070)
C4: (29.812,153.234,56.854)
O5': (30.789,150.238,63.040)
C3': (27.849,149.747,60.673)
C1': (28.007,152.084,60.424)
O4': (29.015,151.673,61.326)
C5': (30.065,149.601,61.975)
P: (31.911,149.463,63.863)
O2: (27.042,153.995,58.781)
C4': (28.755,150.315,61.752)
C2': (26.988,150.949,60.320)
O2': (25.985,151.176,61.290)
N1: (28.647,152.444,59.153)
N3: (28.692,153.840,57.245)
N4: (30.393,153.659,55.733)
C6: (29.780,151.809,58.730)
C5: (30.391,152.171,57.599)
O3': (27.041,148.721,61.224)
OP1: (32.259,150.307,65.036)
OP2: (31.479,148.052,64.070)
C4: (29.812,153.234,56.854)
O5': (30.789,150.238,63.040)
C3': (27.849,149.747,60.673)
C1': (28.007,152.084,60.424)
O4': (29.015,151.673,61.326)
C5': (30.065,149.601,61.975)
P: (31.911,149.463,63.863)
O2: (27.042,153.995,58.781)
C4': (28.755,150.315,61.752)
C2': (26.988,150.949,60.320)
O2': (25.985,151.176,61.290)
N1: (28.647,152.444,59.153)
N3: (28.692,153.840,57.245)
N4: (30.393,153.659,55.733)
C6: (29.780,151.809,58.730)
C5: (30.391,152.171,57.599)
O3': (27.041,148.721,61.224)
OP1: (19.590,141.163,66.844)
OP2: (20.494,143.420,66.001)
C3': (24.071,141.154,68.904)
C1': (25.676,141.852,67.357)
C5': (22.538,140.343,67.010)
O6: (29.390,145.175,64.055)
O4': (24.842,140.970,66.653)
C8: (25.737,143.973,65.951)
C2: (29.616,141.998,65.619)
C6: (29.017,144.178,64.684)
C5: (27.747,143.919,65.255)
C4: (27.564,142.749,65.956)
P: (20.649,141.948,66.164)
C4': (23.920,140.360,67.603)
C2': (24.763,142.429,68.430)
O2': (25.522,143.078,69.427)
N1: (29.905,143.134,64.919)
N2: (30.602,141.106,65.730)
N3: (28.445,141.751,66.172)
N7: (26.582,144.675,65.246)
N9: (26.283,142.811,66.442)
O5': (22.028,141.675,66.901)
O3': (24.957,140.445,69.760)
OP2: (20.494,143.420,66.001)
C3': (24.071,141.154,68.904)
C1': (25.676,141.852,67.357)
C5': (22.538,140.343,67.010)
O6: (29.390,145.175,64.055)
O4': (24.842,140.970,66.653)
C8: (25.737,143.973,65.951)
C2: (29.616,141.998,65.619)
C6: (29.017,144.178,64.684)
C5: (27.747,143.919,65.255)
C4: (27.564,142.749,65.956)
P: (20.649,141.948,66.164)
C4': (23.920,140.360,67.603)
C2': (24.763,142.429,68.430)
O2': (25.522,143.078,69.427)
N1: (29.905,143.134,64.919)
N2: (30.602,141.106,65.730)
N3: (28.445,141.751,66.172)
N7: (26.582,144.675,65.246)
N9: (26.283,142.811,66.442)
O5': (22.028,141.675,66.901)
O3': (24.957,140.445,69.760)
Image (generated by PyMOL):