Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VTQ:A39:A38
Extra
PDB:
ATOM 1 O3' G A 38 5.614 20.576 -22.664 1.00 1.00 O
ATOM 2 P U A 39 6.271 20.467 -21.199 1.00 1.00 P
ATOM 3 OP1 U A 39 7.465 21.379 -21.139 1.00 1.00 O
ATOM 4 OP2 U A 39 6.567 19.026 -21.005 1.00 1.00 O
ATOM 5 O5' U A 39 5.113 21.073 -20.257 1.00 1.00 O
ATOM 6 C5' U A 39 4.408 22.201 -20.855 1.00 1.00 C
ATOM 7 C4' U A 39 2.931 21.950 -20.631 1.00 1.00 C
ATOM 8 O4' U A 39 2.442 20.991 -21.573 1.00 1.00 O
ATOM 9 C3' U A 39 2.569 21.338 -19.285 1.00 1.00 C
ATOM 10 O3' U A 39 2.587 22.283 -18.209 1.00 1.00 O
ATOM 11 C2' U A 39 1.170 20.773 -19.570 1.00 1.00 C
ATOM 12 O2' U A 39 0.271 21.855 -19.510 1.00 1.00 O
ATOM 13 C1' U A 39 1.375 20.250 -20.990 1.00 1.00 C
ATOM 14 N1 U A 39 1.634 18.801 -20.945 1.00 1.00 N
ATOM 15 C2 U A 39 0.543 18.006 -20.646 1.00 1.00 C
ATOM 16 O2 U A 39 -0.567 18.489 -20.437 1.00 1.00 O
ATOM 17 N3 U A 39 0.730 16.653 -20.586 1.00 1.00 N
ATOM 18 C4 U A 39 1.942 16.081 -20.810 1.00 1.00 C
ATOM 19 O4 U A 39 1.978 14.817 -20.721 1.00 1.00 O
ATOM 20 C5 U A 39 3.057 16.911 -21.109 1.00 1.00 C
ATOM 21 C6 U A 39 2.858 18.237 -21.169 1.00 1.00 C
ATOM 22 P G A 40 2.913 21.719 -16.729 1.00 1.00 P
ATOM 23 OP1 G A 40 3.413 22.827 -15.877 1.00 1.00 O
ATOM 24 OP2 G A 40 3.926 20.665 -17.013 1.00 1.00 O
ATOM 25 O5' G A 40 1.490 21.154 -16.281 1.00 1.00 O
TER
ATOM 1 O3' C B 37 7.815 14.925 -25.699 1.00 1.00 O
ATOM 2 P G B 38 7.923 15.660 -24.264 1.00 1.00 P
ATOM 3 OP1 G B 38 9.340 16.156 -24.084 1.00 1.00 O
ATOM 4 OP2 G B 38 7.567 14.551 -23.337 1.00 1.00 O
ATOM 5 O5' G B 38 6.946 16.918 -24.324 1.00 1.00 O
ATOM 6 C5' G B 38 7.429 18.291 -24.234 1.00 1.00 C
ATOM 7 C4' G B 38 6.247 19.162 -24.608 1.00 1.00 C
ATOM 8 O4' G B 38 5.451 18.427 -25.535 1.00 1.00 O
ATOM 9 C3' G B 38 5.252 19.495 -23.501 1.00 1.00 C
ATOM 10 O3' G B 38 5.614 20.576 -22.664 1.00 1.00 O
ATOM 11 C2' G B 38 3.980 19.842 -24.309 1.00 1.00 C
ATOM 12 O2' G B 38 4.118 21.161 -24.787 1.00 1.00 O
ATOM 13 C1' G B 38 4.082 18.808 -25.415 1.00 1.00 C
ATOM 14 N9 G B 38 3.268 17.632 -25.071 1.00 1.00 N
ATOM 15 C8 G B 38 3.636 16.319 -25.146 1.00 1.00 C
ATOM 16 N7 G B 38 2.689 15.490 -24.787 1.00 1.00 N
ATOM 17 C5 G B 38 1.628 16.326 -24.443 1.00 1.00 C
ATOM 18 C6 G B 38 0.319 16.034 -23.980 1.00 1.00 C
ATOM 19 O6 G B 38 -0.175 14.925 -23.756 1.00 1.00 O
ATOM 20 N1 G B 38 -0.458 17.142 -23.756 1.00 1.00 N
ATOM 21 C2 G B 38 0.000 18.407 -23.965 1.00 1.00 C
ATOM 22 N2 G B 38 -0.880 19.373 -23.696 1.00 1.00 N
ATOM 23 N3 G B 38 1.218 18.733 -24.398 1.00 1.00 N
ATOM 24 C4 G B 38 1.978 17.645 -24.623 1.00 1.00 C
ATOM 25 P U B 39 6.271 20.467 -21.199 1.00 1.00 P
ATOM 26 OP1 U B 39 7.465 21.379 -21.139 1.00 1.00 O
ATOM 27 OP2 U B 39 6.567 19.026 -21.005 1.00 1.00 O
ATOM 28 O5' U B 39 5.113 21.073 -20.257 1.00 1.00 O
TER
ATOM 2 P U A 39 6.271 20.467 -21.199 1.00 1.00 P
ATOM 3 OP1 U A 39 7.465 21.379 -21.139 1.00 1.00 O
ATOM 4 OP2 U A 39 6.567 19.026 -21.005 1.00 1.00 O
ATOM 5 O5' U A 39 5.113 21.073 -20.257 1.00 1.00 O
ATOM 6 C5' U A 39 4.408 22.201 -20.855 1.00 1.00 C
ATOM 7 C4' U A 39 2.931 21.950 -20.631 1.00 1.00 C
ATOM 8 O4' U A 39 2.442 20.991 -21.573 1.00 1.00 O
ATOM 9 C3' U A 39 2.569 21.338 -19.285 1.00 1.00 C
ATOM 10 O3' U A 39 2.587 22.283 -18.209 1.00 1.00 O
ATOM 11 C2' U A 39 1.170 20.773 -19.570 1.00 1.00 C
ATOM 12 O2' U A 39 0.271 21.855 -19.510 1.00 1.00 O
ATOM 13 C1' U A 39 1.375 20.250 -20.990 1.00 1.00 C
ATOM 14 N1 U A 39 1.634 18.801 -20.945 1.00 1.00 N
ATOM 15 C2 U A 39 0.543 18.006 -20.646 1.00 1.00 C
ATOM 16 O2 U A 39 -0.567 18.489 -20.437 1.00 1.00 O
ATOM 17 N3 U A 39 0.730 16.653 -20.586 1.00 1.00 N
ATOM 18 C4 U A 39 1.942 16.081 -20.810 1.00 1.00 C
ATOM 19 O4 U A 39 1.978 14.817 -20.721 1.00 1.00 O
ATOM 20 C5 U A 39 3.057 16.911 -21.109 1.00 1.00 C
ATOM 21 C6 U A 39 2.858 18.237 -21.169 1.00 1.00 C
ATOM 22 P G A 40 2.913 21.719 -16.729 1.00 1.00 P
ATOM 23 OP1 G A 40 3.413 22.827 -15.877 1.00 1.00 O
ATOM 24 OP2 G A 40 3.926 20.665 -17.013 1.00 1.00 O
ATOM 25 O5' G A 40 1.490 21.154 -16.281 1.00 1.00 O
TER
ATOM 1 O3' C B 37 7.815 14.925 -25.699 1.00 1.00 O
ATOM 2 P G B 38 7.923 15.660 -24.264 1.00 1.00 P
ATOM 3 OP1 G B 38 9.340 16.156 -24.084 1.00 1.00 O
ATOM 4 OP2 G B 38 7.567 14.551 -23.337 1.00 1.00 O
ATOM 5 O5' G B 38 6.946 16.918 -24.324 1.00 1.00 O
ATOM 6 C5' G B 38 7.429 18.291 -24.234 1.00 1.00 C
ATOM 7 C4' G B 38 6.247 19.162 -24.608 1.00 1.00 C
ATOM 8 O4' G B 38 5.451 18.427 -25.535 1.00 1.00 O
ATOM 9 C3' G B 38 5.252 19.495 -23.501 1.00 1.00 C
ATOM 10 O3' G B 38 5.614 20.576 -22.664 1.00 1.00 O
ATOM 11 C2' G B 38 3.980 19.842 -24.309 1.00 1.00 C
ATOM 12 O2' G B 38 4.118 21.161 -24.787 1.00 1.00 O
ATOM 13 C1' G B 38 4.082 18.808 -25.415 1.00 1.00 C
ATOM 14 N9 G B 38 3.268 17.632 -25.071 1.00 1.00 N
ATOM 15 C8 G B 38 3.636 16.319 -25.146 1.00 1.00 C
ATOM 16 N7 G B 38 2.689 15.490 -24.787 1.00 1.00 N
ATOM 17 C5 G B 38 1.628 16.326 -24.443 1.00 1.00 C
ATOM 18 C6 G B 38 0.319 16.034 -23.980 1.00 1.00 C
ATOM 19 O6 G B 38 -0.175 14.925 -23.756 1.00 1.00 O
ATOM 20 N1 G B 38 -0.458 17.142 -23.756 1.00 1.00 N
ATOM 21 C2 G B 38 0.000 18.407 -23.965 1.00 1.00 C
ATOM 22 N2 G B 38 -0.880 19.373 -23.696 1.00 1.00 N
ATOM 23 N3 G B 38 1.218 18.733 -24.398 1.00 1.00 N
ATOM 24 C4 G B 38 1.978 17.645 -24.623 1.00 1.00 C
ATOM 25 P U B 39 6.271 20.467 -21.199 1.00 1.00 P
ATOM 26 OP1 U B 39 7.465 21.379 -21.139 1.00 1.00 O
ATOM 27 OP2 U B 39 6.567 19.026 -21.005 1.00 1.00 O
ATOM 28 O5' U B 39 5.113 21.073 -20.257 1.00 1.00 O
TER
Atoms:
C4: (1.942,16.081,-20.810)
N3: (0.730,16.653,-20.586)
OP1: (7.465,21.379,-21.139)
OP2: (6.567,19.026,-21.005)
C2: (0.543,18.006,-20.646)
C1': (1.375,20.250,-20.990)
C3': (2.569,21.338,-19.285)
O5': (5.113,21.073,-20.257)
O4': (2.442,20.991,-21.573)
C5': (4.408,22.201,-20.855)
P: (6.271,20.467,-21.199)
C4': (2.931,21.950,-20.631)
C2': (1.170,20.773,-19.570)
O2': (0.271,21.855,-19.510)
N1: (1.634,18.801,-20.945)
O4: (1.978,14.817,-20.721)
O2: (-0.567,18.489,-20.437)
C6: (2.858,18.237,-21.169)
C5: (3.057,16.911,-21.109)
O3': (2.587,22.283,-18.209)
N3: (0.730,16.653,-20.586)
OP1: (7.465,21.379,-21.139)
OP2: (6.567,19.026,-21.005)
C2: (0.543,18.006,-20.646)
C1': (1.375,20.250,-20.990)
C3': (2.569,21.338,-19.285)
O5': (5.113,21.073,-20.257)
O4': (2.442,20.991,-21.573)
C5': (4.408,22.201,-20.855)
P: (6.271,20.467,-21.199)
C4': (2.931,21.950,-20.631)
C2': (1.170,20.773,-19.570)
O2': (0.271,21.855,-19.510)
N1: (1.634,18.801,-20.945)
O4: (1.978,14.817,-20.721)
O2: (-0.567,18.489,-20.437)
C6: (2.858,18.237,-21.169)
C5: (3.057,16.911,-21.109)
O3': (2.587,22.283,-18.209)
OP1: (9.340,16.156,-24.084)
OP2: (7.567,14.551,-23.337)
C3': (5.252,19.495,-23.501)
C1': (4.082,18.808,-25.415)
C5': (7.429,18.291,-24.234)
O6: (-0.175,14.925,-23.756)
O4': (5.451,18.427,-25.535)
C8: (3.636,16.319,-25.146)
C2: (0.000,18.407,-23.965)
C6: (0.319,16.034,-23.980)
C5: (1.628,16.326,-24.443)
C4: (1.978,17.645,-24.623)
P: (7.923,15.660,-24.264)
C4': (6.247,19.162,-24.608)
C2': (3.980,19.842,-24.309)
O2': (4.118,21.161,-24.787)
N1: (-0.458,17.142,-23.756)
N2: (-0.880,19.373,-23.696)
N3: (1.218,18.733,-24.398)
N7: (2.689,15.490,-24.787)
N9: (3.268,17.632,-25.071)
O5': (6.946,16.918,-24.324)
O3': (5.614,20.576,-22.664)
OP2: (7.567,14.551,-23.337)
C3': (5.252,19.495,-23.501)
C1': (4.082,18.808,-25.415)
C5': (7.429,18.291,-24.234)
O6: (-0.175,14.925,-23.756)
O4': (5.451,18.427,-25.535)
C8: (3.636,16.319,-25.146)
C2: (0.000,18.407,-23.965)
C6: (0.319,16.034,-23.980)
C5: (1.628,16.326,-24.443)
C4: (1.978,17.645,-24.623)
P: (7.923,15.660,-24.264)
C4': (6.247,19.162,-24.608)
C2': (3.980,19.842,-24.309)
O2': (4.118,21.161,-24.787)
N1: (-0.458,17.142,-23.756)
N2: (-0.880,19.373,-23.696)
N3: (1.218,18.733,-24.398)
N7: (2.689,15.490,-24.787)
N9: (3.268,17.632,-25.071)
O5': (6.946,16.918,-24.324)
O3': (5.614,20.576,-22.664)
Image (generated by PyMOL):