Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:01953:01954
Extra
PDB:
ATOM 1 O3' C A1952 100.538 106.836 106.438 1.00 54.69 O
ATOM 2 P A A1953 100.945 106.513 104.918 1.00 58.48 P
ATOM 3 OP1 A A1953 99.707 106.301 104.114 1.00 57.59 O
ATOM 4 OP2 A A1953 101.996 105.454 104.957 1.00 58.94 O
ATOM 5 O5' A A1953 101.624 107.859 104.419 1.00 56.06 O
ATOM 6 C5' A A1953 102.244 107.933 103.136 1.00 53.39 C
ATOM 7 C4' A A1953 102.012 109.291 102.535 1.00 52.00 C
ATOM 8 O4' A A1953 100.640 109.398 102.064 1.00 51.52 O
ATOM 9 C3' A A1953 102.228 110.465 103.482 1.00 50.83 C
ATOM 10 O3' A A1953 102.773 111.541 102.750 1.00 51.43 O
ATOM 11 C2' A A1953 100.808 110.812 103.920 1.00 50.50 C
ATOM 12 O2' A A1953 100.662 112.163 104.307 1.00 48.91 O
ATOM 13 C1' A A1953 100.035 110.540 102.634 1.00 50.26 C
ATOM 14 N9 A A1953 98.607 110.275 102.807 1.00 49.00 N
ATOM 15 C8 A A1953 98.000 109.214 103.424 1.00 47.96 C
ATOM 16 N7 A A1953 96.692 109.261 103.384 1.00 48.59 N
ATOM 17 C5 A A1953 96.420 110.438 102.700 1.00 48.66 C
ATOM 18 C6 A A1953 95.217 111.066 102.327 1.00 49.05 C
ATOM 19 N6 A A1953 94.005 110.587 102.612 1.00 51.47 N
ATOM 20 N1 A A1953 95.301 112.225 101.646 1.00 47.59 N
ATOM 21 C2 A A1953 96.506 112.716 101.374 1.00 47.53 C
ATOM 22 N3 A A1953 97.702 112.228 101.676 1.00 48.48 N
ATOM 23 C4 A A1953 97.589 111.072 102.345 1.00 48.09 C
ATOM 24 P U A1954 104.048 112.317 103.321 1.00 51.43 P
ATOM 25 OP1 U A1954 105.273 111.617 102.843 1.00 50.01 O
ATOM 26 OP2 U A1954 103.847 112.531 104.772 1.00 53.24 O
ATOM 27 O5' U A1954 103.930 113.743 102.637 1.00 51.30 O
TER
ATOM 1 O3' A B1953 102.773 111.541 102.750 1.00 51.43 O
ATOM 2 P U B1954 104.048 112.317 103.321 1.00 51.43 P
ATOM 3 OP1 U B1954 105.273 111.617 102.843 1.00 50.01 O
ATOM 4 OP2 U B1954 103.847 112.531 104.772 1.00 53.24 O
ATOM 5 O5' U B1954 103.930 113.743 102.637 1.00 51.30 O
ATOM 6 C5' U B1954 104.778 114.097 101.554 1.00 50.62 C
ATOM 7 C4' U B1954 105.337 115.474 101.770 1.00 49.50 C
ATOM 8 O4' U B1954 105.922 115.572 103.093 1.00 49.42 O
ATOM 9 C3' U B1954 106.475 115.793 100.832 1.00 49.35 C
ATOM 10 O3' U B1954 105.983 116.224 99.579 1.00 48.48 O
ATOM 11 C2' U B1954 107.243 116.853 101.596 1.00 49.95 C
ATOM 12 O2' U B1954 106.637 118.123 101.511 1.00 53.41 O
ATOM 13 C1' U B1954 107.120 116.328 103.030 1.00 49.49 C
ATOM 14 N1 U B1954 108.235 115.460 103.445 1.00 48.54 N
ATOM 15 C2 U B1954 109.525 115.951 103.333 1.00 48.83 C
ATOM 16 O2 U B1954 109.782 117.065 102.910 1.00 50.93 O
ATOM 17 N3 U B1954 110.507 115.089 103.735 1.00 48.09 N
ATOM 18 C4 U B1954 110.345 113.821 104.227 1.00 47.59 C
ATOM 19 O4 U B1954 111.337 113.164 104.537 1.00 48.10 O
ATOM 20 C5 U B1954 108.991 113.386 104.315 1.00 48.09 C
ATOM 21 C6 U B1954 108.008 114.197 103.932 1.00 47.72 C
ATOM 22 P G B1955 106.557 115.556 98.247 1.00 48.98 P
ATOM 23 OP1 G B1955 105.821 116.121 97.085 1.00 49.14 O
ATOM 24 OP2 G B1955 106.606 114.083 98.446 1.00 48.31 O
ATOM 25 O5' G B1955 108.055 116.083 98.209 1.00 49.67 O
TER
ATOM 2 P A A1953 100.945 106.513 104.918 1.00 58.48 P
ATOM 3 OP1 A A1953 99.707 106.301 104.114 1.00 57.59 O
ATOM 4 OP2 A A1953 101.996 105.454 104.957 1.00 58.94 O
ATOM 5 O5' A A1953 101.624 107.859 104.419 1.00 56.06 O
ATOM 6 C5' A A1953 102.244 107.933 103.136 1.00 53.39 C
ATOM 7 C4' A A1953 102.012 109.291 102.535 1.00 52.00 C
ATOM 8 O4' A A1953 100.640 109.398 102.064 1.00 51.52 O
ATOM 9 C3' A A1953 102.228 110.465 103.482 1.00 50.83 C
ATOM 10 O3' A A1953 102.773 111.541 102.750 1.00 51.43 O
ATOM 11 C2' A A1953 100.808 110.812 103.920 1.00 50.50 C
ATOM 12 O2' A A1953 100.662 112.163 104.307 1.00 48.91 O
ATOM 13 C1' A A1953 100.035 110.540 102.634 1.00 50.26 C
ATOM 14 N9 A A1953 98.607 110.275 102.807 1.00 49.00 N
ATOM 15 C8 A A1953 98.000 109.214 103.424 1.00 47.96 C
ATOM 16 N7 A A1953 96.692 109.261 103.384 1.00 48.59 N
ATOM 17 C5 A A1953 96.420 110.438 102.700 1.00 48.66 C
ATOM 18 C6 A A1953 95.217 111.066 102.327 1.00 49.05 C
ATOM 19 N6 A A1953 94.005 110.587 102.612 1.00 51.47 N
ATOM 20 N1 A A1953 95.301 112.225 101.646 1.00 47.59 N
ATOM 21 C2 A A1953 96.506 112.716 101.374 1.00 47.53 C
ATOM 22 N3 A A1953 97.702 112.228 101.676 1.00 48.48 N
ATOM 23 C4 A A1953 97.589 111.072 102.345 1.00 48.09 C
ATOM 24 P U A1954 104.048 112.317 103.321 1.00 51.43 P
ATOM 25 OP1 U A1954 105.273 111.617 102.843 1.00 50.01 O
ATOM 26 OP2 U A1954 103.847 112.531 104.772 1.00 53.24 O
ATOM 27 O5' U A1954 103.930 113.743 102.637 1.00 51.30 O
TER
ATOM 1 O3' A B1953 102.773 111.541 102.750 1.00 51.43 O
ATOM 2 P U B1954 104.048 112.317 103.321 1.00 51.43 P
ATOM 3 OP1 U B1954 105.273 111.617 102.843 1.00 50.01 O
ATOM 4 OP2 U B1954 103.847 112.531 104.772 1.00 53.24 O
ATOM 5 O5' U B1954 103.930 113.743 102.637 1.00 51.30 O
ATOM 6 C5' U B1954 104.778 114.097 101.554 1.00 50.62 C
ATOM 7 C4' U B1954 105.337 115.474 101.770 1.00 49.50 C
ATOM 8 O4' U B1954 105.922 115.572 103.093 1.00 49.42 O
ATOM 9 C3' U B1954 106.475 115.793 100.832 1.00 49.35 C
ATOM 10 O3' U B1954 105.983 116.224 99.579 1.00 48.48 O
ATOM 11 C2' U B1954 107.243 116.853 101.596 1.00 49.95 C
ATOM 12 O2' U B1954 106.637 118.123 101.511 1.00 53.41 O
ATOM 13 C1' U B1954 107.120 116.328 103.030 1.00 49.49 C
ATOM 14 N1 U B1954 108.235 115.460 103.445 1.00 48.54 N
ATOM 15 C2 U B1954 109.525 115.951 103.333 1.00 48.83 C
ATOM 16 O2 U B1954 109.782 117.065 102.910 1.00 50.93 O
ATOM 17 N3 U B1954 110.507 115.089 103.735 1.00 48.09 N
ATOM 18 C4 U B1954 110.345 113.821 104.227 1.00 47.59 C
ATOM 19 O4 U B1954 111.337 113.164 104.537 1.00 48.10 O
ATOM 20 C5 U B1954 108.991 113.386 104.315 1.00 48.09 C
ATOM 21 C6 U B1954 108.008 114.197 103.932 1.00 47.72 C
ATOM 22 P G B1955 106.557 115.556 98.247 1.00 48.98 P
ATOM 23 OP1 G B1955 105.821 116.121 97.085 1.00 49.14 O
ATOM 24 OP2 G B1955 106.606 114.083 98.446 1.00 48.31 O
ATOM 25 O5' G B1955 108.055 116.083 98.209 1.00 49.67 O
TER
Atoms:
OP1: (99.707,106.301,104.114)
OP2: (101.996,105.454,104.957)
C3': (102.228,110.465,103.482)
C1': (100.035,110.540,102.634)
C5': (102.244,107.933,103.136)
O4': (100.640,109.398,102.064)
C8: (98.000,109.214,103.424)
O2': (100.662,112.163,104.307)
C6: (95.217,111.066,102.327)
C5: (96.420,110.438,102.700)
C4: (97.589,111.072,102.345)
P: (100.945,106.513,104.918)
C4': (102.012,109.291,102.535)
C2': (100.808,110.812,103.920)
C2: (96.506,112.716,101.374)
N1: (95.301,112.225,101.646)
N3: (97.702,112.228,101.676)
N6: (94.005,110.587,102.612)
N7: (96.692,109.261,103.384)
N9: (98.607,110.275,102.807)
O5': (101.624,107.859,104.419)
O3': (102.773,111.541,102.750)
OP2: (101.996,105.454,104.957)
C3': (102.228,110.465,103.482)
C1': (100.035,110.540,102.634)
C5': (102.244,107.933,103.136)
O4': (100.640,109.398,102.064)
C8: (98.000,109.214,103.424)
O2': (100.662,112.163,104.307)
C6: (95.217,111.066,102.327)
C5: (96.420,110.438,102.700)
C4: (97.589,111.072,102.345)
P: (100.945,106.513,104.918)
C4': (102.012,109.291,102.535)
C2': (100.808,110.812,103.920)
C2: (96.506,112.716,101.374)
N1: (95.301,112.225,101.646)
N3: (97.702,112.228,101.676)
N6: (94.005,110.587,102.612)
N7: (96.692,109.261,103.384)
N9: (98.607,110.275,102.807)
O5': (101.624,107.859,104.419)
O3': (102.773,111.541,102.750)
C4: (110.345,113.821,104.227)
N3: (110.507,115.089,103.735)
OP1: (105.273,111.617,102.843)
OP2: (103.847,112.531,104.772)
C2: (109.525,115.951,103.333)
C1': (107.120,116.328,103.030)
C3': (106.475,115.793,100.832)
O5': (103.930,113.743,102.637)
O4': (105.922,115.572,103.093)
C5': (104.778,114.097,101.554)
P: (104.048,112.317,103.321)
C4': (105.337,115.474,101.770)
C2': (107.243,116.853,101.596)
O2': (106.637,118.123,101.511)
N1: (108.235,115.460,103.445)
O4: (111.337,113.164,104.537)
O2: (109.782,117.065,102.910)
C6: (108.008,114.197,103.932)
C5: (108.991,113.386,104.315)
O3': (105.983,116.224,99.579)
N3: (110.507,115.089,103.735)
OP1: (105.273,111.617,102.843)
OP2: (103.847,112.531,104.772)
C2: (109.525,115.951,103.333)
C1': (107.120,116.328,103.030)
C3': (106.475,115.793,100.832)
O5': (103.930,113.743,102.637)
O4': (105.922,115.572,103.093)
C5': (104.778,114.097,101.554)
P: (104.048,112.317,103.321)
C4': (105.337,115.474,101.770)
C2': (107.243,116.853,101.596)
O2': (106.637,118.123,101.511)
N1: (108.235,115.460,103.445)
O4: (111.337,113.164,104.537)
O2: (109.782,117.065,102.910)
C6: (108.008,114.197,103.932)
C5: (108.991,113.386,104.315)
O3': (105.983,116.224,99.579)
Image (generated by PyMOL):