ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01199:02025

Extra

PDB:
ATOM 1 O3' G A1198 35.003 111.619 121.045 1.00 35.85 O
ATOM 2 P G A1199 34.769 111.605 122.638 1.00 35.59 P
ATOM 3 OP1 G A1199 36.104 111.846 123.219 1.00 33.68 O
ATOM 4 OP2 G A1199 34.010 110.391 123.036 1.00 33.76 O
ATOM 5 O5' G A1199 33.848 112.880 122.903 1.00 32.72 O
ATOM 6 C5' G A1199 34.320 114.197 122.615 1.00 31.45 C
ATOM 7 C4' G A1199 33.170 115.162 122.589 1.00 31.70 C
ATOM 8 O4' G A1199 32.201 114.710 121.609 1.00 35.56 O
ATOM 9 C3' G A1199 32.362 115.252 123.871 1.00 32.71 C
ATOM 10 O3' G A1199 32.966 116.113 124.813 1.00 33.96 O
ATOM 11 C2' G A1199 31.029 115.779 123.367 1.00 31.77 C
ATOM 12 O2' G A1199 31.053 117.159 123.080 1.00 28.82 O
ATOM 13 C1' G A1199 30.884 114.994 122.064 1.00 31.94 C
ATOM 14 N9 G A1199 30.207 113.722 122.292 1.00 31.58 N
ATOM 15 C8 G A1199 30.775 112.473 122.291 1.00 33.21 C
ATOM 16 N7 G A1199 29.922 111.524 122.560 1.00 34.39 N
ATOM 17 C5 G A1199 28.719 112.186 122.744 1.00 33.07 C
ATOM 18 C6 G A1199 27.439 111.682 123.064 1.00 33.84 C
ATOM 19 O6 G A1199 27.103 110.511 123.255 1.00 33.53 O
ATOM 20 N1 G A1199 26.499 112.701 123.162 1.00 32.32 N
ATOM 21 C2 G A1199 26.762 114.035 122.975 1.00 32.38 C
ATOM 22 N2 G A1199 25.734 114.874 123.122 1.00 30.95 N
ATOM 23 N3 G A1199 27.952 114.515 122.671 1.00 33.42 N
ATOM 24 C4 G A1199 28.877 113.542 122.574 1.00 32.49 C
ATOM 25 P G A1200 32.808 115.806 126.381 1.00 33.16 P
ATOM 26 OP1 G A1200 33.674 116.785 127.088 1.00 35.27 O
ATOM 27 OP2 G A1200 33.000 114.361 126.603 1.00 31.22 O
ATOM 28 O5' G A1200 31.289 116.167 126.688 1.00 34.51 O
TER

ATOM 1 O3' U B2024 31.558 114.152 112.009 1.00 37.65 O
ATOM 2 P G B2025 30.705 115.319 112.702 1.00 38.90 P
ATOM 3 OP1 G B2025 29.340 114.769 112.888 1.00 41.26 O
ATOM 4 OP2 G B2025 30.886 116.598 111.962 1.00 37.62 O
ATOM 5 O5' G B2025 31.400 115.453 114.128 1.00 39.25 O
ATOM 6 C5' G B2025 31.556 114.293 114.975 1.00 37.73 C
ATOM 7 C4' G B2025 32.369 114.640 116.192 1.00 36.77 C
ATOM 8 O4' G B2025 33.779 114.765 115.867 1.00 36.09 O
ATOM 9 C3' G B2025 32.011 115.979 116.797 1.00 36.64 C
ATOM 10 O3' G B2025 30.825 115.869 117.561 1.00 39.41 O
ATOM 11 C2' G B2025 33.265 116.320 117.592 1.00 35.71 C
ATOM 12 O2' G B2025 33.354 115.612 118.813 1.00 34.36 O
ATOM 13 C1' G B2025 34.356 115.802 116.651 1.00 34.36 C
ATOM 14 N9 G B2025 34.893 116.826 115.756 1.00 35.00 N
ATOM 15 C8 G B2025 34.445 117.141 114.493 1.00 31.72 C
ATOM 16 N7 G B2025 35.126 118.104 113.934 1.00 33.32 N
ATOM 17 C5 G B2025 36.090 118.442 114.877 1.00 35.19 C
ATOM 18 C6 G B2025 37.130 119.420 114.832 1.00 36.37 C
ATOM 19 O6 G B2025 37.433 120.185 113.911 1.00 36.63 O
ATOM 20 N1 G B2025 37.855 119.451 116.016 1.00 35.82 N
ATOM 21 C2 G B2025 37.628 118.642 117.102 1.00 35.05 C
ATOM 22 N2 G B2025 38.430 118.845 118.164 1.00 28.23 N
ATOM 23 N3 G B2025 36.685 117.711 117.148 1.00 33.37 N
ATOM 24 C4 G B2025 35.955 117.670 116.012 1.00 35.27 C
ATOM 25 P G B2026 29.999 117.187 117.918 1.00 40.69 P
ATOM 26 OP1 G B2026 28.652 116.783 118.359 1.00 43.50 O
ATOM 27 OP2 G B2026 30.144 118.148 116.797 1.00 44.20 O
ATOM 28 O5' G B2026 30.777 117.735 119.188 1.00 40.69 O
TER

Atoms:
OP1: (36.104,111.846,123.219)
OP2: (34.010,110.391,123.036)
C3': (32.362,115.252,123.871)
C1': (30.884,114.994,122.064)
C5': (34.320,114.197,122.615)
O6: (27.103,110.511,123.255)
O4': (32.201,114.710,121.609)
C8: (30.775,112.473,122.291)
C2: (26.762,114.035,122.975)
C6: (27.439,111.682,123.064)
C5: (28.719,112.186,122.744)
C4: (28.877,113.542,122.574)
P: (34.769,111.605,122.638)
C4': (33.170,115.162,122.589)
C2': (31.029,115.779,123.367)
O2': (31.053,117.159,123.080)
N1: (26.499,112.701,123.162)
N2: (25.734,114.874,123.122)
N3: (27.952,114.515,122.671)
N7: (29.922,111.524,122.560)
N9: (30.207,113.722,122.292)
O5': (33.848,112.880,122.903)
O3': (32.966,116.113,124.813)
OP1: (29.340,114.769,112.888)
OP2: (30.886,116.598,111.962)
C3': (32.011,115.979,116.797)
C1': (34.356,115.802,116.651)
C5': (31.556,114.293,114.975)
O6: (37.433,120.185,113.911)
O4': (33.779,114.765,115.867)
C8: (34.445,117.141,114.493)
C2: (37.628,118.642,117.102)
C6: (37.130,119.420,114.832)
C5: (36.090,118.442,114.877)
C4: (35.955,117.670,116.012)
P: (30.705,115.319,112.702)
C4': (32.369,114.640,116.192)
C2': (33.265,116.320,117.592)
O2': (33.354,115.612,118.813)
N1: (37.855,119.451,116.016)
N2: (38.430,118.845,118.164)
N3: (36.685,117.711,117.148)
N7: (35.126,118.104,113.934)
N9: (34.893,116.826,115.756)
O5': (31.400,115.453,114.128)
O3': (30.825,115.869,117.561)
Image (generated by PyMOL):
PyMOL image
show in jmol