ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01199:02025

Extra

PDB:
ATOM 1 O3' G A1198 34.882 111.488 120.860 1.00 40.95 O
ATOM 2 P G A1199 34.667 111.488 122.455 1.00 40.30 P
ATOM 3 OP1 G A1199 35.997 111.778 123.025 1.00 37.82 O
ATOM 4 OP2 G A1199 33.952 110.247 122.859 1.00 38.49 O
ATOM 5 O5' G A1199 33.717 112.742 122.715 1.00 36.58 O
ATOM 6 C5' G A1199 34.177 114.066 122.441 1.00 35.22 C
ATOM 7 C4' G A1199 33.018 115.019 122.416 1.00 37.19 C
ATOM 8 O4' G A1199 32.063 114.571 121.419 1.00 39.71 O
ATOM 9 C3' G A1199 32.201 115.089 123.692 1.00 36.51 C
ATOM 10 O3' G A1199 32.798 115.960 124.631 1.00 37.55 O
ATOM 11 C2' G A1199 30.871 115.614 123.178 1.00 37.45 C
ATOM 12 O2' G A1199 30.897 116.999 122.903 1.00 36.39 O
ATOM 13 C1' G A1199 30.743 114.836 121.867 1.00 37.51 C
ATOM 14 N9 G A1199 30.083 113.554 122.086 1.00 37.03 N
ATOM 15 C8 G A1199 30.663 112.308 122.079 1.00 38.23 C
ATOM 16 N7 G A1199 29.821 111.352 122.347 1.00 37.10 N
ATOM 17 C5 G A1199 28.613 112.004 122.535 1.00 38.36 C
ATOM 18 C6 G A1199 27.345 111.493 122.872 1.00 38.51 C
ATOM 19 O6 G A1199 27.023 110.321 123.080 1.00 39.80 O
ATOM 20 N1 G A1199 26.399 112.506 122.977 1.00 38.52 N
ATOM 21 C2 G A1199 26.651 113.845 122.801 1.00 37.58 C
ATOM 22 N2 G A1199 25.623 114.683 122.986 1.00 36.72 N
ATOM 23 N3 G A1199 27.829 114.331 122.481 1.00 38.59 N
ATOM 24 C4 G A1199 28.759 113.363 122.369 1.00 38.04 C
ATOM 25 P G A1200 32.626 115.681 126.204 1.00 37.37 P
ATOM 26 OP1 G A1200 33.458 116.696 126.897 1.00 38.72 O
ATOM 27 OP2 G A1200 32.850 114.245 126.467 1.00 35.01 O
ATOM 28 O5' G A1200 31.099 116.028 126.481 1.00 40.11 O
TER

ATOM 1 O3' U B2024 31.360 114.030 111.839 1.00 42.94 O
ATOM 2 P G B2025 30.549 115.233 112.533 1.00 44.47 P
ATOM 3 OP1 G B2025 29.164 114.744 112.726 1.00 47.61 O
ATOM 4 OP2 G B2025 30.780 116.507 111.806 1.00 44.92 O
ATOM 5 O5' G B2025 31.245 115.351 113.959 1.00 45.89 O
ATOM 6 C5' G B2025 31.400 114.182 114.796 1.00 43.01 C
ATOM 7 C4' G B2025 32.211 114.519 116.018 1.00 42.18 C
ATOM 8 O4' G B2025 33.620 114.646 115.693 1.00 41.31 O
ATOM 9 C3' G B2025 31.854 115.849 116.646 1.00 41.94 C
ATOM 10 O3' G B2025 30.682 115.716 117.425 1.00 45.54 O
ATOM 11 C2' G B2025 33.110 116.178 117.439 1.00 41.28 C
ATOM 12 O2' G B2025 33.207 115.447 118.650 1.00 41.31 O
ATOM 13 C1' G B2025 34.198 115.675 116.486 1.00 39.26 C
ATOM 14 N9 G B2025 34.733 116.701 115.593 1.00 40.07 N
ATOM 15 C8 G B2025 34.293 117.002 114.323 1.00 37.32 C
ATOM 16 N7 G B2025 34.976 117.958 113.757 1.00 39.07 N
ATOM 17 C5 G B2025 35.932 118.308 114.701 1.00 40.58 C
ATOM 18 C6 G B2025 36.972 119.284 114.645 1.00 40.22 C
ATOM 19 O6 G B2025 37.285 120.026 113.711 1.00 39.17 O
ATOM 20 N1 G B2025 37.686 119.339 115.835 1.00 39.69 N
ATOM 21 C2 G B2025 37.447 118.555 116.934 1.00 40.11 C
ATOM 22 N2 G B2025 38.226 118.791 117.997 1.00 34.23 N
ATOM 23 N3 G B2025 36.506 117.617 116.990 1.00 38.43 N
ATOM 24 C4 G B2025 35.787 117.554 115.848 1.00 39.46 C
ATOM 25 P G B2026 29.816 117.010 117.772 1.00 47.44 P
ATOM 26 OP1 G B2026 28.487 116.528 118.179 1.00 52.39 O
ATOM 27 OP2 G B2026 29.929 117.986 116.668 1.00 51.44 O
ATOM 28 O5' G B2026 30.555 117.583 119.054 1.00 49.82 O
TER

Atoms:
OP1: (35.997,111.778,123.025)
OP2: (33.952,110.247,122.859)
C3': (32.201,115.089,123.692)
C1': (30.743,114.836,121.867)
C5': (34.177,114.066,122.441)
O6: (27.023,110.321,123.080)
O4': (32.063,114.571,121.419)
C8: (30.663,112.308,122.079)
C2: (26.651,113.845,122.801)
C6: (27.345,111.493,122.872)
C5: (28.613,112.004,122.535)
C4: (28.759,113.363,122.369)
P: (34.667,111.488,122.455)
C4': (33.018,115.019,122.416)
C2': (30.871,115.614,123.178)
O2': (30.897,116.999,122.903)
N1: (26.399,112.506,122.977)
N2: (25.623,114.683,122.986)
N3: (27.829,114.331,122.481)
N7: (29.821,111.352,122.347)
N9: (30.083,113.554,122.086)
O5': (33.717,112.742,122.715)
O3': (32.798,115.960,124.631)
OP1: (29.164,114.744,112.726)
OP2: (30.780,116.507,111.806)
C3': (31.854,115.849,116.646)
C1': (34.198,115.675,116.486)
C5': (31.400,114.182,114.796)
O6: (37.285,120.026,113.711)
O4': (33.620,114.646,115.693)
C8: (34.293,117.002,114.323)
C2: (37.447,118.555,116.934)
C6: (36.972,119.284,114.645)
C5: (35.932,118.308,114.701)
C4: (35.787,117.554,115.848)
P: (30.549,115.233,112.533)
C4': (32.211,114.519,116.018)
C2': (33.110,116.178,117.439)
O2': (33.207,115.447,118.650)
N1: (37.686,119.339,115.835)
N2: (38.226,118.791,117.997)
N3: (36.506,117.617,116.990)
N7: (34.976,117.958,113.757)
N9: (34.733,116.701,115.593)
O5': (31.245,115.351,113.959)
O3': (30.682,115.716,117.425)
Image (generated by PyMOL):
PyMOL image
show in jmol