Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNK:A1041:A1040
Extra
PDB:
ATOM 1 O3' G A1040 29.642 -82.091 121.473 1.00130.40 O
ATOM 2 P U A1041 28.365 -81.960 120.494 1.00137.04 P
ATOM 3 OP1 U A1041 28.417 -80.653 119.787 1.00134.96 O
ATOM 4 OP2 U A1041 27.164 -82.321 121.296 1.00127.09 O
ATOM 5 O5' U A1041 28.611 -83.117 119.422 1.00130.28 O
ATOM 6 C5' U A1041 27.524 -83.690 118.717 1.00125.84 C
ATOM 7 C4' U A1041 27.937 -84.994 118.083 1.00120.26 C
ATOM 8 O4' U A1041 28.473 -85.874 119.086 1.00119.68 O
ATOM 9 C3' U A1041 26.786 -85.754 117.433 1.00121.65 C
ATOM 10 O3' U A1041 26.749 -85.356 116.066 1.00123.51 O
ATOM 11 C2' U A1041 27.231 -87.209 117.546 1.00119.27 C
ATOM 12 O2' U A1041 28.094 -87.575 116.499 1.00109.03 O
ATOM 13 C1' U A1041 28.041 -87.195 118.846 1.00118.64 C
ATOM 14 N1 U A1041 27.344 -87.650 120.057 1.00116.56 N
ATOM 15 C2 U A1041 26.729 -88.891 120.066 1.00115.02 C
ATOM 16 O2 U A1041 26.737 -89.653 119.104 1.00116.60 O
ATOM 17 N3 U A1041 26.107 -89.209 121.251 1.00111.92 N
ATOM 18 C4 U A1041 26.043 -88.434 122.391 1.00113.21 C
ATOM 19 O4 U A1041 25.362 -88.810 123.349 1.00117.10 O
ATOM 20 C5 U A1041 26.714 -87.184 122.293 1.00115.05 C
ATOM 21 C6 U A1041 27.317 -86.843 121.162 1.00115.68 C
ATOM 22 P G A1042 25.358 -84.927 115.369 1.00127.27 P
ATOM 23 OP1 G A1042 25.566 -85.064 113.899 1.00126.75 O
ATOM 24 OP2 G A1042 24.918 -83.622 115.938 1.00124.71 O
ATOM 25 O5' G A1042 24.310 -86.032 115.805 1.00125.04 O
TER
ATOM 1 O3' U B1039 27.550 -81.660 126.006 1.00126.61 O
ATOM 2 P G B1040 28.220 -83.021 126.528 1.00122.26 P
ATOM 3 OP1 G B1040 27.147 -84.050 126.599 1.00121.10 O
ATOM 4 OP2 G B1040 29.039 -82.732 127.728 1.00124.62 O
ATOM 5 O5' G B1040 29.227 -83.405 125.362 1.00125.00 O
ATOM 6 C5' G B1040 30.214 -82.486 124.901 1.00124.71 C
ATOM 7 C4' G B1040 30.729 -82.933 123.556 1.00124.74 C
ATOM 8 O4' G B1040 31.325 -84.245 123.728 1.00125.44 O
ATOM 9 C3' G B1040 29.629 -83.073 122.503 1.00127.73 C
ATOM 10 O3' G B1040 29.642 -82.091 121.473 1.00130.40 O
ATOM 11 C2' G B1040 29.672 -84.526 122.031 1.00125.28 C
ATOM 12 O2' G B1040 29.748 -84.661 120.631 1.00122.55 O
ATOM 13 C1' G B1040 30.937 -85.103 122.671 1.00120.07 C
ATOM 14 N9 G B1040 30.563 -86.400 123.229 1.00113.71 N
ATOM 15 C8 G B1040 30.175 -86.664 124.522 1.00114.96 C
ATOM 16 N7 G B1040 29.711 -87.872 124.680 1.00109.38 N
ATOM 17 C5 G B1040 29.832 -88.451 123.428 1.00108.77 C
ATOM 18 C6 G B1040 29.450 -89.729 122.977 1.00107.16 C
ATOM 19 O6 G B1040 28.858 -90.620 123.596 1.00109.95 O
ATOM 20 N1 G B1040 29.793 -89.923 121.645 1.00107.85 N
ATOM 21 C2 G B1040 30.406 -88.996 120.844 1.00108.55 C
ATOM 22 N2 G B1040 30.680 -89.389 119.593 1.00112.64 N
ATOM 23 N3 G B1040 30.730 -87.780 121.241 1.00110.17 N
ATOM 24 C4 G B1040 30.414 -87.578 122.536 1.00111.70 C
ATOM 25 P U B1041 28.365 -81.960 120.494 1.00137.04 P
ATOM 26 OP1 U B1041 28.417 -80.653 119.787 1.00134.96 O
ATOM 27 OP2 U B1041 27.164 -82.321 121.296 1.00127.09 O
ATOM 28 O5' U B1041 28.611 -83.117 119.422 1.00130.28 O
TER
ATOM 2 P U A1041 28.365 -81.960 120.494 1.00137.04 P
ATOM 3 OP1 U A1041 28.417 -80.653 119.787 1.00134.96 O
ATOM 4 OP2 U A1041 27.164 -82.321 121.296 1.00127.09 O
ATOM 5 O5' U A1041 28.611 -83.117 119.422 1.00130.28 O
ATOM 6 C5' U A1041 27.524 -83.690 118.717 1.00125.84 C
ATOM 7 C4' U A1041 27.937 -84.994 118.083 1.00120.26 C
ATOM 8 O4' U A1041 28.473 -85.874 119.086 1.00119.68 O
ATOM 9 C3' U A1041 26.786 -85.754 117.433 1.00121.65 C
ATOM 10 O3' U A1041 26.749 -85.356 116.066 1.00123.51 O
ATOM 11 C2' U A1041 27.231 -87.209 117.546 1.00119.27 C
ATOM 12 O2' U A1041 28.094 -87.575 116.499 1.00109.03 O
ATOM 13 C1' U A1041 28.041 -87.195 118.846 1.00118.64 C
ATOM 14 N1 U A1041 27.344 -87.650 120.057 1.00116.56 N
ATOM 15 C2 U A1041 26.729 -88.891 120.066 1.00115.02 C
ATOM 16 O2 U A1041 26.737 -89.653 119.104 1.00116.60 O
ATOM 17 N3 U A1041 26.107 -89.209 121.251 1.00111.92 N
ATOM 18 C4 U A1041 26.043 -88.434 122.391 1.00113.21 C
ATOM 19 O4 U A1041 25.362 -88.810 123.349 1.00117.10 O
ATOM 20 C5 U A1041 26.714 -87.184 122.293 1.00115.05 C
ATOM 21 C6 U A1041 27.317 -86.843 121.162 1.00115.68 C
ATOM 22 P G A1042 25.358 -84.927 115.369 1.00127.27 P
ATOM 23 OP1 G A1042 25.566 -85.064 113.899 1.00126.75 O
ATOM 24 OP2 G A1042 24.918 -83.622 115.938 1.00124.71 O
ATOM 25 O5' G A1042 24.310 -86.032 115.805 1.00125.04 O
TER
ATOM 1 O3' U B1039 27.550 -81.660 126.006 1.00126.61 O
ATOM 2 P G B1040 28.220 -83.021 126.528 1.00122.26 P
ATOM 3 OP1 G B1040 27.147 -84.050 126.599 1.00121.10 O
ATOM 4 OP2 G B1040 29.039 -82.732 127.728 1.00124.62 O
ATOM 5 O5' G B1040 29.227 -83.405 125.362 1.00125.00 O
ATOM 6 C5' G B1040 30.214 -82.486 124.901 1.00124.71 C
ATOM 7 C4' G B1040 30.729 -82.933 123.556 1.00124.74 C
ATOM 8 O4' G B1040 31.325 -84.245 123.728 1.00125.44 O
ATOM 9 C3' G B1040 29.629 -83.073 122.503 1.00127.73 C
ATOM 10 O3' G B1040 29.642 -82.091 121.473 1.00130.40 O
ATOM 11 C2' G B1040 29.672 -84.526 122.031 1.00125.28 C
ATOM 12 O2' G B1040 29.748 -84.661 120.631 1.00122.55 O
ATOM 13 C1' G B1040 30.937 -85.103 122.671 1.00120.07 C
ATOM 14 N9 G B1040 30.563 -86.400 123.229 1.00113.71 N
ATOM 15 C8 G B1040 30.175 -86.664 124.522 1.00114.96 C
ATOM 16 N7 G B1040 29.711 -87.872 124.680 1.00109.38 N
ATOM 17 C5 G B1040 29.832 -88.451 123.428 1.00108.77 C
ATOM 18 C6 G B1040 29.450 -89.729 122.977 1.00107.16 C
ATOM 19 O6 G B1040 28.858 -90.620 123.596 1.00109.95 O
ATOM 20 N1 G B1040 29.793 -89.923 121.645 1.00107.85 N
ATOM 21 C2 G B1040 30.406 -88.996 120.844 1.00108.55 C
ATOM 22 N2 G B1040 30.680 -89.389 119.593 1.00112.64 N
ATOM 23 N3 G B1040 30.730 -87.780 121.241 1.00110.17 N
ATOM 24 C4 G B1040 30.414 -87.578 122.536 1.00111.70 C
ATOM 25 P U B1041 28.365 -81.960 120.494 1.00137.04 P
ATOM 26 OP1 U B1041 28.417 -80.653 119.787 1.00134.96 O
ATOM 27 OP2 U B1041 27.164 -82.321 121.296 1.00127.09 O
ATOM 28 O5' U B1041 28.611 -83.117 119.422 1.00130.28 O
TER
Atoms:
C4: (26.043,-88.434,122.391)
N3: (26.107,-89.209,121.251)
OP1: (28.417,-80.653,119.787)
OP2: (27.164,-82.321,121.296)
C2: (26.729,-88.891,120.066)
C1': (28.041,-87.195,118.846)
C3': (26.786,-85.754,117.433)
O5': (28.611,-83.117,119.422)
O4': (28.473,-85.874,119.086)
C5': (27.524,-83.690,118.717)
P: (28.365,-81.960,120.494)
C4': (27.937,-84.994,118.083)
C2': (27.231,-87.209,117.546)
O2': (28.094,-87.575,116.499)
N1: (27.344,-87.650,120.057)
O4: (25.362,-88.810,123.349)
O2: (26.737,-89.653,119.104)
C6: (27.317,-86.843,121.162)
C5: (26.714,-87.184,122.293)
O3': (26.749,-85.356,116.066)
N3: (26.107,-89.209,121.251)
OP1: (28.417,-80.653,119.787)
OP2: (27.164,-82.321,121.296)
C2: (26.729,-88.891,120.066)
C1': (28.041,-87.195,118.846)
C3': (26.786,-85.754,117.433)
O5': (28.611,-83.117,119.422)
O4': (28.473,-85.874,119.086)
C5': (27.524,-83.690,118.717)
P: (28.365,-81.960,120.494)
C4': (27.937,-84.994,118.083)
C2': (27.231,-87.209,117.546)
O2': (28.094,-87.575,116.499)
N1: (27.344,-87.650,120.057)
O4: (25.362,-88.810,123.349)
O2: (26.737,-89.653,119.104)
C6: (27.317,-86.843,121.162)
C5: (26.714,-87.184,122.293)
O3': (26.749,-85.356,116.066)
OP1: (27.147,-84.050,126.599)
OP2: (29.039,-82.732,127.728)
C3': (29.629,-83.073,122.503)
C1': (30.937,-85.103,122.671)
C5': (30.214,-82.486,124.901)
O6: (28.858,-90.620,123.596)
O4': (31.325,-84.245,123.728)
C8: (30.175,-86.664,124.522)
C2: (30.406,-88.996,120.844)
C6: (29.450,-89.729,122.977)
C5: (29.832,-88.451,123.428)
C4: (30.414,-87.578,122.536)
P: (28.220,-83.021,126.528)
C4': (30.729,-82.933,123.556)
C2': (29.672,-84.526,122.031)
O2': (29.748,-84.661,120.631)
N1: (29.793,-89.923,121.645)
N2: (30.680,-89.389,119.593)
N3: (30.730,-87.780,121.241)
N7: (29.711,-87.872,124.680)
N9: (30.563,-86.400,123.229)
O5': (29.227,-83.405,125.362)
O3': (29.642,-82.091,121.473)
OP2: (29.039,-82.732,127.728)
C3': (29.629,-83.073,122.503)
C1': (30.937,-85.103,122.671)
C5': (30.214,-82.486,124.901)
O6: (28.858,-90.620,123.596)
O4': (31.325,-84.245,123.728)
C8: (30.175,-86.664,124.522)
C2: (30.406,-88.996,120.844)
C6: (29.450,-89.729,122.977)
C5: (29.832,-88.451,123.428)
C4: (30.414,-87.578,122.536)
P: (28.220,-83.021,126.528)
C4': (30.729,-82.933,123.556)
C2': (29.672,-84.526,122.031)
O2': (29.748,-84.661,120.631)
N1: (29.793,-89.923,121.645)
N2: (30.680,-89.389,119.593)
N3: (30.730,-87.780,121.241)
N7: (29.711,-87.872,124.680)
N9: (30.563,-86.400,123.229)
O5': (29.227,-83.405,125.362)
O3': (29.642,-82.091,121.473)
Image (generated by PyMOL):