ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:01199:02025

Extra

PDB:
ATOM 1 O3' G A1198 35.078 112.103 121.034 1.00 35.89 O
ATOM 2 P G A1199 34.828 112.068 122.629 1.00 35.16 P
ATOM 3 OP1 G A1199 36.141 112.266 123.254 1.00 35.04 O
ATOM 4 OP2 G A1199 34.024 110.861 122.983 1.00 36.25 O
ATOM 5 O5' G A1199 33.924 113.348 122.896 1.00 33.26 O
ATOM 6 C5' G A1199 34.393 114.660 122.575 1.00 33.03 C
ATOM 7 C4' G A1199 33.242 115.631 122.569 1.00 32.68 C
ATOM 8 O4' G A1199 32.279 115.214 121.566 1.00 35.45 O
ATOM 9 C3' G A1199 32.426 115.697 123.849 1.00 32.53 C
ATOM 10 O3' G A1199 33.025 116.561 124.797 1.00 35.11 O
ATOM 11 C2' G A1199 31.102 116.245 123.341 1.00 31.17 C
ATOM 12 O2' G A1199 31.168 117.621 123.071 1.00 31.41 O
ATOM 13 C1' G A1199 30.959 115.486 122.021 1.00 32.41 C
ATOM 14 N9 G A1199 30.283 114.208 122.231 1.00 30.65 N
ATOM 15 C8 G A1199 30.846 112.959 122.189 1.00 29.85 C
ATOM 16 N7 G A1199 30.001 112.008 122.470 1.00 32.25 N
ATOM 17 C5 G A1199 28.806 112.671 122.705 1.00 32.24 C
ATOM 18 C6 G A1199 27.525 112.166 123.071 1.00 32.61 C
ATOM 19 O6 G A1199 27.186 110.989 123.283 1.00 30.71 O
ATOM 20 N1 G A1199 26.590 113.191 123.188 1.00 31.49 N
ATOM 21 C2 G A1199 26.854 114.525 122.992 1.00 32.15 C
ATOM 22 N2 G A1199 25.830 115.368 123.143 1.00 30.52 N
ATOM 23 N3 G A1199 28.042 115.002 122.670 1.00 33.43 N
ATOM 24 C4 G A1199 28.962 114.027 122.542 1.00 30.86 C
ATOM 25 P G A1200 32.869 116.265 126.370 1.00 33.05 P
ATOM 26 OP1 G A1200 33.756 117.258 127.046 1.00 38.20 O
ATOM 27 OP2 G A1200 33.065 114.828 126.620 1.00 32.95 O
ATOM 28 O5' G A1200 31.356 116.640 126.694 1.00 34.76 O
TER

ATOM 1 O3' U B2024 31.641 114.679 111.982 1.00 38.58 O
ATOM 2 P G B2025 30.823 115.851 112.705 1.00 37.53 P
ATOM 3 OP1 G B2025 29.470 115.291 112.922 1.00 41.29 O
ATOM 4 OP2 G B2025 30.972 117.144 111.992 1.00 38.55 O
ATOM 5 O5' G B2025 31.551 115.971 114.116 1.00 39.39 O
ATOM 6 C5' G B2025 31.656 114.826 114.985 1.00 36.72 C
ATOM 7 C4' G B2025 32.469 115.169 116.204 1.00 37.74 C
ATOM 8 O4' G B2025 33.876 115.285 115.876 1.00 36.14 O
ATOM 9 C3' G B2025 32.122 116.506 116.826 1.00 38.00 C
ATOM 10 O3' G B2025 30.955 116.362 117.606 1.00 42.14 O
ATOM 11 C2' G B2025 33.381 116.822 117.620 1.00 37.68 C
ATOM 12 O2' G B2025 33.468 116.071 118.819 1.00 37.61 O
ATOM 13 C1' G B2025 34.460 116.318 116.657 1.00 34.96 C
ATOM 14 N9 G B2025 34.978 117.341 115.749 1.00 35.06 N
ATOM 15 C8 G B2025 34.526 117.634 114.480 1.00 32.72 C
ATOM 16 N7 G B2025 35.210 118.583 113.900 1.00 35.30 N
ATOM 17 C5 G B2025 36.176 118.935 114.838 1.00 35.24 C
ATOM 18 C6 G B2025 37.229 119.894 114.770 1.00 34.57 C
ATOM 19 O6 G B2025 37.553 120.614 113.827 1.00 35.06 O
ATOM 20 N1 G B2025 37.946 119.955 115.962 1.00 32.55 N
ATOM 21 C2 G B2025 37.698 119.185 117.070 1.00 32.32 C
ATOM 22 N2 G B2025 38.474 119.416 118.143 1.00 26.03 N
ATOM 23 N3 G B2025 36.752 118.262 117.131 1.00 32.16 N
ATOM 24 C4 G B2025 36.032 118.194 115.992 1.00 33.57 C
ATOM 25 P G B2026 30.047 117.637 117.922 1.00 41.17 P
ATOM 26 OP1 G B2026 28.729 117.112 118.338 1.00 45.42 O
ATOM 27 OP2 G B2026 30.128 118.629 116.824 1.00 44.46 O
ATOM 28 O5' G B2026 30.755 118.226 119.211 1.00 44.06 O
TER

Atoms:
OP1: (36.141,112.266,123.254)
OP2: (34.024,110.861,122.983)
C3': (32.426,115.697,123.849)
C1': (30.959,115.486,122.021)
C5': (34.393,114.660,122.575)
O6: (27.186,110.989,123.283)
O4': (32.279,115.214,121.566)
C8: (30.846,112.959,122.189)
C2: (26.854,114.525,122.992)
C6: (27.525,112.166,123.071)
C5: (28.806,112.671,122.705)
C4: (28.962,114.027,122.542)
P: (34.828,112.068,122.629)
C4': (33.242,115.631,122.569)
C2': (31.102,116.245,123.341)
O2': (31.168,117.621,123.071)
N1: (26.590,113.191,123.188)
N2: (25.830,115.368,123.143)
N3: (28.042,115.002,122.670)
N7: (30.001,112.008,122.470)
N9: (30.283,114.208,122.231)
O5': (33.924,113.348,122.896)
O3': (33.025,116.561,124.797)
OP1: (29.470,115.291,112.922)
OP2: (30.972,117.144,111.992)
C3': (32.122,116.506,116.826)
C1': (34.460,116.318,116.657)
C5': (31.656,114.826,114.985)
O6: (37.553,120.614,113.827)
O4': (33.876,115.285,115.876)
C8: (34.526,117.634,114.480)
C2: (37.698,119.185,117.070)
C6: (37.229,119.894,114.770)
C5: (36.176,118.935,114.838)
C4: (36.032,118.194,115.992)
P: (30.823,115.851,112.705)
C4': (32.469,115.169,116.204)
C2': (33.381,116.822,117.620)
O2': (33.468,116.071,118.819)
N1: (37.946,119.955,115.962)
N2: (38.474,119.416,118.143)
N3: (36.752,118.262,117.131)
N7: (35.210,118.583,113.900)
N9: (34.978,117.341,115.749)
O5': (31.551,115.971,114.116)
O3': (30.955,116.362,117.606)
Image (generated by PyMOL):
PyMOL image
show in jmol