Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2453:A2452
Extra
PDB:
ATOM 1 O3' A A2452 -105.437 -55.683 -11.848 1.00 0.01 O
ATOM 2 P U A2453 -104.987 -55.133 -13.294 1.00 0.01 P
ATOM 3 OP1 U A2453 -105.983 -54.127 -13.672 1.00 0.01 O
ATOM 4 OP2 U A2453 -104.780 -56.293 -14.184 1.00 0.01 O
ATOM 5 O5' U A2453 -103.599 -54.435 -12.999 1.00 0.01 O
ATOM 6 C5' U A2453 -103.530 -53.159 -12.421 1.00 0.01 C
ATOM 7 C4' U A2453 -102.109 -52.734 -12.280 1.00 0.01 C
ATOM 8 O4' U A2453 -101.438 -53.639 -11.374 1.00 0.01 O
ATOM 9 C3' U A2453 -101.302 -52.795 -13.551 1.00 0.01 C
ATOM 10 O3' U A2453 -101.431 -51.641 -14.330 1.00 0.01 O
ATOM 11 C2' U A2453 -99.885 -53.054 -13.066 1.00 0.01 C
ATOM 12 O2' U A2453 -99.219 -51.848 -12.723 1.00 0.01 O
ATOM 13 C1' U A2453 -100.130 -53.891 -11.803 1.00 0.01 C
ATOM 14 N1 U A2453 -100.025 -55.320 -12.093 1.00 0.44 N
ATOM 15 C2 U A2453 -98.786 -55.887 -12.279 1.00 0.44 C
ATOM 16 O2 U A2453 -97.739 -55.270 -12.143 1.00 0.44 O
ATOM 17 N3 U A2453 -98.812 -57.209 -12.602 1.00 0.44 N
ATOM 18 C4 U A2453 -99.912 -57.987 -12.756 1.00 0.44 C
ATOM 19 O4 U A2453 -99.759 -59.156 -13.041 1.00 0.44 O
ATOM 20 C5 U A2453 -101.145 -57.337 -12.577 1.00 0.44 C
ATOM 21 C6 U A2453 -101.157 -56.047 -12.265 1.00 0.44 C
ATOM 22 P A A2454 -101.737 -51.776 -15.894 1.00 8.85 P
ATOM 23 OP1 A A2454 -102.213 -50.463 -16.386 1.00 8.85 O
ATOM 24 OP2 A A2454 -102.625 -52.941 -16.055 1.00 8.85 O
ATOM 25 O5' A A2454 -100.307 -52.091 -16.497 1.00 8.85 O
TER
ATOM 1 O3' G B2451 -102.570 -60.899 -11.764 1.00 0.01 O
ATOM 2 P A B2452 -103.978 -60.549 -12.482 1.00 0.01 P
ATOM 3 OP1 A B2452 -104.991 -61.507 -11.992 1.00 0.01 O
ATOM 4 OP2 A B2452 -103.719 -60.458 -13.942 1.00 0.01 O
ATOM 5 O5' A B2452 -104.297 -59.115 -11.911 1.00 0.01 O
ATOM 6 C5' A B2452 -105.500 -58.858 -11.247 1.00 0.01 C
ATOM 7 C4' A B2452 -105.367 -57.641 -10.416 1.00 0.01 C
ATOM 8 O4' A B2452 -104.619 -57.968 -9.226 1.00 0.01 O
ATOM 9 C3' A B2452 -104.599 -56.512 -11.064 1.00 0.01 C
ATOM 10 O3' A B2452 -105.437 -55.683 -11.848 1.00 0.01 O
ATOM 11 C2' A B2452 -103.998 -55.806 -9.866 1.00 0.01 C
ATOM 12 O2' A B2452 -104.971 -55.017 -9.217 1.00 0.01 O
ATOM 13 C1' A B2452 -103.670 -56.981 -8.965 1.00 0.01 C
ATOM 14 N9 A B2452 -102.325 -57.549 -9.229 1.00 0.01 N
ATOM 15 C8 A B2452 -101.988 -58.816 -9.630 1.00 0.01 C
ATOM 16 N7 A B2452 -100.711 -59.030 -9.770 1.00 0.01 N
ATOM 17 C5 A B2452 -100.154 -57.825 -9.428 1.00 0.01 C
ATOM 18 C6 A B2452 -98.828 -57.369 -9.356 1.00 0.01 C
ATOM 19 N6 A B2452 -97.753 -58.101 -9.636 1.00 0.01 N
ATOM 20 N1 A B2452 -98.608 -56.097 -8.984 1.00 0.01 N
ATOM 21 C2 A B2452 -99.655 -55.324 -8.700 1.00 0.01 C
ATOM 22 N3 A B2452 -100.940 -55.628 -8.726 1.00 0.01 N
ATOM 23 C4 A B2452 -101.125 -56.909 -9.097 1.00 0.01 C
ATOM 24 P U B2453 -104.987 -55.133 -13.294 1.00 0.01 P
ATOM 25 OP1 U B2453 -105.983 -54.127 -13.672 1.00 0.01 O
ATOM 26 OP2 U B2453 -104.780 -56.293 -14.184 1.00 0.01 O
ATOM 27 O5' U B2453 -103.599 -54.435 -12.999 1.00 0.01 O
TER
ATOM 2 P U A2453 -104.987 -55.133 -13.294 1.00 0.01 P
ATOM 3 OP1 U A2453 -105.983 -54.127 -13.672 1.00 0.01 O
ATOM 4 OP2 U A2453 -104.780 -56.293 -14.184 1.00 0.01 O
ATOM 5 O5' U A2453 -103.599 -54.435 -12.999 1.00 0.01 O
ATOM 6 C5' U A2453 -103.530 -53.159 -12.421 1.00 0.01 C
ATOM 7 C4' U A2453 -102.109 -52.734 -12.280 1.00 0.01 C
ATOM 8 O4' U A2453 -101.438 -53.639 -11.374 1.00 0.01 O
ATOM 9 C3' U A2453 -101.302 -52.795 -13.551 1.00 0.01 C
ATOM 10 O3' U A2453 -101.431 -51.641 -14.330 1.00 0.01 O
ATOM 11 C2' U A2453 -99.885 -53.054 -13.066 1.00 0.01 C
ATOM 12 O2' U A2453 -99.219 -51.848 -12.723 1.00 0.01 O
ATOM 13 C1' U A2453 -100.130 -53.891 -11.803 1.00 0.01 C
ATOM 14 N1 U A2453 -100.025 -55.320 -12.093 1.00 0.44 N
ATOM 15 C2 U A2453 -98.786 -55.887 -12.279 1.00 0.44 C
ATOM 16 O2 U A2453 -97.739 -55.270 -12.143 1.00 0.44 O
ATOM 17 N3 U A2453 -98.812 -57.209 -12.602 1.00 0.44 N
ATOM 18 C4 U A2453 -99.912 -57.987 -12.756 1.00 0.44 C
ATOM 19 O4 U A2453 -99.759 -59.156 -13.041 1.00 0.44 O
ATOM 20 C5 U A2453 -101.145 -57.337 -12.577 1.00 0.44 C
ATOM 21 C6 U A2453 -101.157 -56.047 -12.265 1.00 0.44 C
ATOM 22 P A A2454 -101.737 -51.776 -15.894 1.00 8.85 P
ATOM 23 OP1 A A2454 -102.213 -50.463 -16.386 1.00 8.85 O
ATOM 24 OP2 A A2454 -102.625 -52.941 -16.055 1.00 8.85 O
ATOM 25 O5' A A2454 -100.307 -52.091 -16.497 1.00 8.85 O
TER
ATOM 1 O3' G B2451 -102.570 -60.899 -11.764 1.00 0.01 O
ATOM 2 P A B2452 -103.978 -60.549 -12.482 1.00 0.01 P
ATOM 3 OP1 A B2452 -104.991 -61.507 -11.992 1.00 0.01 O
ATOM 4 OP2 A B2452 -103.719 -60.458 -13.942 1.00 0.01 O
ATOM 5 O5' A B2452 -104.297 -59.115 -11.911 1.00 0.01 O
ATOM 6 C5' A B2452 -105.500 -58.858 -11.247 1.00 0.01 C
ATOM 7 C4' A B2452 -105.367 -57.641 -10.416 1.00 0.01 C
ATOM 8 O4' A B2452 -104.619 -57.968 -9.226 1.00 0.01 O
ATOM 9 C3' A B2452 -104.599 -56.512 -11.064 1.00 0.01 C
ATOM 10 O3' A B2452 -105.437 -55.683 -11.848 1.00 0.01 O
ATOM 11 C2' A B2452 -103.998 -55.806 -9.866 1.00 0.01 C
ATOM 12 O2' A B2452 -104.971 -55.017 -9.217 1.00 0.01 O
ATOM 13 C1' A B2452 -103.670 -56.981 -8.965 1.00 0.01 C
ATOM 14 N9 A B2452 -102.325 -57.549 -9.229 1.00 0.01 N
ATOM 15 C8 A B2452 -101.988 -58.816 -9.630 1.00 0.01 C
ATOM 16 N7 A B2452 -100.711 -59.030 -9.770 1.00 0.01 N
ATOM 17 C5 A B2452 -100.154 -57.825 -9.428 1.00 0.01 C
ATOM 18 C6 A B2452 -98.828 -57.369 -9.356 1.00 0.01 C
ATOM 19 N6 A B2452 -97.753 -58.101 -9.636 1.00 0.01 N
ATOM 20 N1 A B2452 -98.608 -56.097 -8.984 1.00 0.01 N
ATOM 21 C2 A B2452 -99.655 -55.324 -8.700 1.00 0.01 C
ATOM 22 N3 A B2452 -100.940 -55.628 -8.726 1.00 0.01 N
ATOM 23 C4 A B2452 -101.125 -56.909 -9.097 1.00 0.01 C
ATOM 24 P U B2453 -104.987 -55.133 -13.294 1.00 0.01 P
ATOM 25 OP1 U B2453 -105.983 -54.127 -13.672 1.00 0.01 O
ATOM 26 OP2 U B2453 -104.780 -56.293 -14.184 1.00 0.01 O
ATOM 27 O5' U B2453 -103.599 -54.435 -12.999 1.00 0.01 O
TER
Atoms:
C4: (-99.912,-57.987,-12.756)
N3: (-98.812,-57.209,-12.602)
OP1: (-105.983,-54.127,-13.672)
OP2: (-104.780,-56.293,-14.184)
C2: (-98.786,-55.887,-12.279)
C1': (-100.130,-53.891,-11.803)
C3': (-101.302,-52.795,-13.551)
O5': (-103.599,-54.435,-12.999)
O4': (-101.438,-53.639,-11.374)
C5': (-103.530,-53.159,-12.421)
P: (-104.987,-55.133,-13.294)
C4': (-102.109,-52.734,-12.280)
C2': (-99.885,-53.054,-13.066)
O2': (-99.219,-51.848,-12.723)
N1: (-100.025,-55.320,-12.093)
O4: (-99.759,-59.156,-13.041)
O2: (-97.739,-55.270,-12.143)
C6: (-101.157,-56.047,-12.265)
C5: (-101.145,-57.337,-12.577)
O3': (-101.431,-51.641,-14.330)
N3: (-98.812,-57.209,-12.602)
OP1: (-105.983,-54.127,-13.672)
OP2: (-104.780,-56.293,-14.184)
C2: (-98.786,-55.887,-12.279)
C1': (-100.130,-53.891,-11.803)
C3': (-101.302,-52.795,-13.551)
O5': (-103.599,-54.435,-12.999)
O4': (-101.438,-53.639,-11.374)
C5': (-103.530,-53.159,-12.421)
P: (-104.987,-55.133,-13.294)
C4': (-102.109,-52.734,-12.280)
C2': (-99.885,-53.054,-13.066)
O2': (-99.219,-51.848,-12.723)
N1: (-100.025,-55.320,-12.093)
O4: (-99.759,-59.156,-13.041)
O2: (-97.739,-55.270,-12.143)
C6: (-101.157,-56.047,-12.265)
C5: (-101.145,-57.337,-12.577)
O3': (-101.431,-51.641,-14.330)
OP1: (-104.991,-61.507,-11.992)
OP2: (-103.719,-60.458,-13.942)
C3': (-104.599,-56.512,-11.064)
C1': (-103.670,-56.981,-8.965)
C5': (-105.500,-58.858,-11.247)
O4': (-104.619,-57.968,-9.226)
C8: (-101.988,-58.816,-9.630)
O2': (-104.971,-55.017,-9.217)
C6: (-98.828,-57.369,-9.356)
C5: (-100.154,-57.825,-9.428)
C4: (-101.125,-56.909,-9.097)
P: (-103.978,-60.549,-12.482)
C4': (-105.367,-57.641,-10.416)
C2': (-103.998,-55.806,-9.866)
C2: (-99.655,-55.324,-8.700)
N1: (-98.608,-56.097,-8.984)
N3: (-100.940,-55.628,-8.726)
N6: (-97.753,-58.101,-9.636)
N7: (-100.711,-59.030,-9.770)
N9: (-102.325,-57.549,-9.229)
O5': (-104.297,-59.115,-11.911)
O3': (-105.437,-55.683,-11.848)
OP2: (-103.719,-60.458,-13.942)
C3': (-104.599,-56.512,-11.064)
C1': (-103.670,-56.981,-8.965)
C5': (-105.500,-58.858,-11.247)
O4': (-104.619,-57.968,-9.226)
C8: (-101.988,-58.816,-9.630)
O2': (-104.971,-55.017,-9.217)
C6: (-98.828,-57.369,-9.356)
C5: (-100.154,-57.825,-9.428)
C4: (-101.125,-56.909,-9.097)
P: (-103.978,-60.549,-12.482)
C4': (-105.367,-57.641,-10.416)
C2': (-103.998,-55.806,-9.866)
C2: (-99.655,-55.324,-8.700)
N1: (-98.608,-56.097,-8.984)
N3: (-100.940,-55.628,-8.726)
N6: (-97.753,-58.101,-9.636)
N7: (-100.711,-59.030,-9.770)
N9: (-102.325,-57.549,-9.229)
O5': (-104.297,-59.115,-11.911)
O3': (-105.437,-55.683,-11.848)
Image (generated by PyMOL):