ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01199:02025

Extra

PDB:
ATOM 1 O3' G A1198 34.840 112.416 120.670 1.00 38.74 O
ATOM 2 P G A1199 34.595 112.434 122.262 1.00 40.12 P
ATOM 3 OP1 G A1199 35.911 112.693 122.895 1.00 39.33 O
ATOM 4 OP2 G A1199 33.828 111.220 122.646 1.00 38.30 O
ATOM 5 O5' G A1199 33.683 113.715 122.493 1.00 35.43 O
ATOM 6 C5' G A1199 34.190 115.021 122.207 1.00 35.46 C
ATOM 7 C4' G A1199 33.075 116.028 122.245 1.00 36.28 C
ATOM 8 O4' G A1199 32.073 115.653 121.265 1.00 38.83 O
ATOM 9 C3' G A1199 32.303 116.081 123.550 1.00 36.20 C
ATOM 10 O3' G A1199 32.949 116.882 124.529 1.00 37.89 O
ATOM 11 C2' G A1199 30.976 116.659 123.099 1.00 36.05 C
ATOM 12 O2' G A1199 31.081 118.041 122.844 1.00 35.97 O
ATOM 13 C1' G A1199 30.775 115.907 121.783 1.00 37.52 C
ATOM 14 N9 G A1199 30.113 114.619 121.988 1.00 37.04 N
ATOM 15 C8 G A1199 30.692 113.377 121.946 1.00 36.77 C
ATOM 16 N7 G A1199 29.853 112.412 122.203 1.00 38.22 N
ATOM 17 C5 G A1199 28.646 113.054 122.425 1.00 36.51 C
ATOM 18 C6 G A1199 27.381 112.526 122.761 1.00 38.42 C
ATOM 19 O6 G A1199 27.063 111.341 122.934 1.00 40.07 O
ATOM 20 N1 G A1199 26.429 113.530 122.898 1.00 37.33 N
ATOM 21 C2 G A1199 26.667 114.870 122.729 1.00 37.30 C
ATOM 22 N2 G A1199 25.625 115.696 122.902 1.00 39.15 N
ATOM 23 N3 G A1199 27.844 115.372 122.415 1.00 38.58 N
ATOM 24 C4 G A1199 28.783 114.414 122.283 1.00 37.41 C
ATOM 25 P G A1200 32.675 116.605 126.086 1.00 35.02 P
ATOM 26 OP1 G A1200 33.444 117.606 126.861 1.00 35.60 O
ATOM 27 OP2 G A1200 32.877 115.161 126.344 1.00 32.04 O
ATOM 28 O5' G A1200 31.127 116.943 126.260 1.00 37.75 O
TER

ATOM 1 O3' U B2024 31.541 115.048 111.621 1.00 39.73 O
ATOM 2 P G B2025 30.724 116.235 112.345 1.00 42.47 P
ATOM 3 OP1 G B2025 29.360 115.696 112.552 1.00 42.58 O
ATOM 4 OP2 G B2025 30.900 117.529 111.622 1.00 40.47 O
ATOM 5 O5' G B2025 31.428 116.352 113.766 1.00 40.18 O
ATOM 6 C5' G B2025 31.533 115.197 114.617 1.00 40.43 C
ATOM 7 C4' G B2025 32.310 115.536 115.857 1.00 40.41 C
ATOM 8 O4' G B2025 33.719 115.698 115.553 1.00 40.04 O
ATOM 9 C3' G B2025 31.911 116.852 116.484 1.00 41.05 C
ATOM 10 O3' G B2025 30.724 116.678 117.238 1.00 42.17 O
ATOM 11 C2' G B2025 33.147 117.204 117.297 1.00 39.33 C
ATOM 12 O2' G B2025 33.234 116.447 118.485 1.00 41.73 O
ATOM 13 C1' G B2025 34.259 116.733 116.357 1.00 39.45 C
ATOM 14 N9 G B2025 34.789 117.771 115.473 1.00 39.65 N
ATOM 15 C8 G B2025 34.336 118.106 114.219 1.00 37.23 C
ATOM 16 N7 G B2025 35.036 119.054 113.659 1.00 37.34 N
ATOM 17 C5 G B2025 36.007 119.369 114.598 1.00 38.24 C
ATOM 18 C6 G B2025 37.061 120.322 114.549 1.00 39.22 C
ATOM 19 O6 G B2025 37.367 121.082 113.628 1.00 40.44 O
ATOM 20 N1 G B2025 37.800 120.331 115.728 1.00 39.89 N
ATOM 21 C2 G B2025 37.565 119.519 116.811 1.00 39.42 C
ATOM 22 N2 G B2025 38.374 119.680 117.864 1.00 38.50 N
ATOM 23 N3 G B2025 36.601 118.616 116.861 1.00 39.30 N
ATOM 24 C4 G B2025 35.863 118.597 115.729 1.00 38.76 C
ATOM 25 P G B2026 29.887 117.959 117.716 1.00 43.05 P
ATOM 26 OP1 G B2026 28.599 117.420 118.232 1.00 46.96 O
ATOM 27 OP2 G B2026 29.870 118.997 116.655 1.00 42.78 O
ATOM 28 O5' G B2026 30.748 118.485 118.946 1.00 41.99 O
TER

Atoms:
OP1: (35.911,112.693,122.895)
OP2: (33.828,111.220,122.646)
C3': (32.303,116.081,123.550)
C1': (30.775,115.907,121.783)
C5': (34.190,115.021,122.207)
O6: (27.063,111.341,122.934)
O4': (32.073,115.653,121.265)
C8: (30.692,113.377,121.946)
C2: (26.667,114.870,122.729)
C6: (27.381,112.526,122.761)
C5: (28.646,113.054,122.425)
C4: (28.783,114.414,122.283)
P: (34.595,112.434,122.262)
C4': (33.075,116.028,122.245)
C2': (30.976,116.659,123.099)
O2': (31.081,118.041,122.844)
N1: (26.429,113.530,122.898)
N2: (25.625,115.696,122.902)
N3: (27.844,115.372,122.415)
N7: (29.853,112.412,122.203)
N9: (30.113,114.619,121.988)
O5': (33.683,113.715,122.493)
O3': (32.949,116.882,124.529)
OP1: (29.360,115.696,112.552)
OP2: (30.900,117.529,111.622)
C3': (31.911,116.852,116.484)
C1': (34.259,116.733,116.357)
C5': (31.533,115.197,114.617)
O6: (37.367,121.082,113.628)
O4': (33.719,115.698,115.553)
C8: (34.336,118.106,114.219)
C2: (37.565,119.519,116.811)
C6: (37.061,120.322,114.549)
C5: (36.007,119.369,114.598)
C4: (35.863,118.597,115.729)
P: (30.724,116.235,112.345)
C4': (32.310,115.536,115.857)
C2': (33.147,117.204,117.297)
O2': (33.234,116.447,118.485)
N1: (37.800,120.331,115.728)
N2: (38.374,119.680,117.864)
N3: (36.601,118.616,116.861)
N7: (35.036,119.054,113.659)
N9: (34.789,117.771,115.473)
O5': (31.428,116.352,113.766)
O3': (30.724,116.678,117.238)
Image (generated by PyMOL):
PyMOL image
show in jmol