Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01199:02025
Extra
PDB:
ATOM 1 O3' G A1198 34.788 112.665 120.661 1.00 35.24 O
ATOM 2 P G A1199 34.548 112.693 122.248 1.00 38.16 P
ATOM 3 OP1 G A1199 35.869 112.971 122.859 1.00 36.65 O
ATOM 4 OP2 G A1199 33.789 111.468 122.650 1.00 35.54 O
ATOM 5 O5' G A1199 33.619 113.963 122.471 1.00 33.43 O
ATOM 6 C5' G A1199 34.119 115.275 122.208 1.00 33.87 C
ATOM 7 C4' G A1199 32.995 116.269 122.248 1.00 34.70 C
ATOM 8 O4' G A1199 31.999 115.887 121.266 1.00 37.41 O
ATOM 9 C3' G A1199 32.219 116.314 123.548 1.00 34.70 C
ATOM 10 O3' G A1199 32.871 117.113 124.525 1.00 36.27 O
ATOM 11 C2' G A1199 30.898 116.901 123.089 1.00 35.12 C
ATOM 12 O2' G A1199 31.015 118.286 122.821 1.00 35.24 O
ATOM 13 C1' G A1199 30.699 116.143 121.776 1.00 35.62 C
ATOM 14 N9 G A1199 30.035 114.856 121.978 1.00 35.49 N
ATOM 15 C8 G A1199 30.607 113.609 121.918 1.00 33.88 C
ATOM 16 N7 G A1199 29.766 112.648 122.185 1.00 36.11 N
ATOM 17 C5 G A1199 28.565 113.297 122.431 1.00 34.27 C
ATOM 18 C6 G A1199 27.299 112.779 122.791 1.00 35.64 C
ATOM 19 O6 G A1199 26.972 111.602 122.978 1.00 36.55 O
ATOM 20 N1 G A1199 26.356 113.791 122.941 1.00 35.20 N
ATOM 21 C2 G A1199 26.602 115.127 122.771 1.00 34.02 C
ATOM 22 N2 G A1199 25.568 115.956 122.960 1.00 32.63 N
ATOM 23 N3 G A1199 27.778 115.620 122.440 1.00 36.53 N
ATOM 24 C4 G A1199 28.709 114.657 122.291 1.00 35.01 C
ATOM 25 P G A1200 32.614 116.826 126.082 1.00 32.47 P
ATOM 26 OP1 G A1200 33.395 117.822 126.855 1.00 34.14 O
ATOM 27 OP2 G A1200 32.817 115.382 126.332 1.00 30.72 O
ATOM 28 O5' G A1200 31.069 117.162 126.273 1.00 34.84 O
TER
ATOM 1 O3' U B2024 31.503 115.259 111.618 1.00 34.85 O
ATOM 2 P G B2025 30.695 116.439 112.360 1.00 38.13 P
ATOM 3 OP1 G B2025 29.305 115.937 112.528 1.00 37.88 O
ATOM 4 OP2 G B2025 30.926 117.742 111.680 1.00 36.67 O
ATOM 5 O5' G B2025 31.378 116.523 113.794 1.00 35.64 O
ATOM 6 C5' G B2025 31.472 115.359 114.636 1.00 36.14 C
ATOM 7 C4' G B2025 32.222 115.697 115.898 1.00 36.87 C
ATOM 8 O4' G B2025 33.645 115.847 115.637 1.00 35.67 O
ATOM 9 C3' G B2025 31.808 117.022 116.501 1.00 36.38 C
ATOM 10 O3' G B2025 30.606 116.859 117.233 1.00 37.52 O
ATOM 11 C2' G B2025 33.028 117.395 117.328 1.00 35.02 C
ATOM 12 O2' G B2025 33.097 116.658 118.528 1.00 37.28 O
ATOM 13 C1' G B2025 34.162 116.915 116.417 1.00 35.51 C
ATOM 14 N9 G B2025 34.684 117.935 115.506 1.00 35.52 N
ATOM 15 C8 G B2025 34.212 118.236 114.251 1.00 33.41 C
ATOM 16 N7 G B2025 34.896 119.174 113.656 1.00 33.98 N
ATOM 17 C5 G B2025 35.880 119.520 114.571 1.00 34.76 C
ATOM 18 C6 G B2025 36.921 120.487 114.480 1.00 35.71 C
ATOM 19 O6 G B2025 37.192 121.237 113.541 1.00 38.06 O
ATOM 20 N1 G B2025 37.686 120.530 115.641 1.00 35.08 N
ATOM 21 C2 G B2025 37.482 119.741 116.746 1.00 34.98 C
ATOM 22 N2 G B2025 38.323 119.937 117.770 1.00 33.28 N
ATOM 23 N3 G B2025 36.521 118.827 116.841 1.00 34.02 N
ATOM 24 C4 G B2025 35.761 118.773 115.724 1.00 34.75 C
ATOM 25 P G B2026 29.791 118.149 117.727 1.00 37.79 P
ATOM 26 OP1 G B2026 28.542 117.613 118.325 1.00 40.73 O
ATOM 27 OP2 G B2026 29.706 119.162 116.638 1.00 37.36 O
ATOM 28 O5' G B2026 30.713 118.703 118.899 1.00 35.91 O
TER
ATOM 2 P G A1199 34.548 112.693 122.248 1.00 38.16 P
ATOM 3 OP1 G A1199 35.869 112.971 122.859 1.00 36.65 O
ATOM 4 OP2 G A1199 33.789 111.468 122.650 1.00 35.54 O
ATOM 5 O5' G A1199 33.619 113.963 122.471 1.00 33.43 O
ATOM 6 C5' G A1199 34.119 115.275 122.208 1.00 33.87 C
ATOM 7 C4' G A1199 32.995 116.269 122.248 1.00 34.70 C
ATOM 8 O4' G A1199 31.999 115.887 121.266 1.00 37.41 O
ATOM 9 C3' G A1199 32.219 116.314 123.548 1.00 34.70 C
ATOM 10 O3' G A1199 32.871 117.113 124.525 1.00 36.27 O
ATOM 11 C2' G A1199 30.898 116.901 123.089 1.00 35.12 C
ATOM 12 O2' G A1199 31.015 118.286 122.821 1.00 35.24 O
ATOM 13 C1' G A1199 30.699 116.143 121.776 1.00 35.62 C
ATOM 14 N9 G A1199 30.035 114.856 121.978 1.00 35.49 N
ATOM 15 C8 G A1199 30.607 113.609 121.918 1.00 33.88 C
ATOM 16 N7 G A1199 29.766 112.648 122.185 1.00 36.11 N
ATOM 17 C5 G A1199 28.565 113.297 122.431 1.00 34.27 C
ATOM 18 C6 G A1199 27.299 112.779 122.791 1.00 35.64 C
ATOM 19 O6 G A1199 26.972 111.602 122.978 1.00 36.55 O
ATOM 20 N1 G A1199 26.356 113.791 122.941 1.00 35.20 N
ATOM 21 C2 G A1199 26.602 115.127 122.771 1.00 34.02 C
ATOM 22 N2 G A1199 25.568 115.956 122.960 1.00 32.63 N
ATOM 23 N3 G A1199 27.778 115.620 122.440 1.00 36.53 N
ATOM 24 C4 G A1199 28.709 114.657 122.291 1.00 35.01 C
ATOM 25 P G A1200 32.614 116.826 126.082 1.00 32.47 P
ATOM 26 OP1 G A1200 33.395 117.822 126.855 1.00 34.14 O
ATOM 27 OP2 G A1200 32.817 115.382 126.332 1.00 30.72 O
ATOM 28 O5' G A1200 31.069 117.162 126.273 1.00 34.84 O
TER
ATOM 1 O3' U B2024 31.503 115.259 111.618 1.00 34.85 O
ATOM 2 P G B2025 30.695 116.439 112.360 1.00 38.13 P
ATOM 3 OP1 G B2025 29.305 115.937 112.528 1.00 37.88 O
ATOM 4 OP2 G B2025 30.926 117.742 111.680 1.00 36.67 O
ATOM 5 O5' G B2025 31.378 116.523 113.794 1.00 35.64 O
ATOM 6 C5' G B2025 31.472 115.359 114.636 1.00 36.14 C
ATOM 7 C4' G B2025 32.222 115.697 115.898 1.00 36.87 C
ATOM 8 O4' G B2025 33.645 115.847 115.637 1.00 35.67 O
ATOM 9 C3' G B2025 31.808 117.022 116.501 1.00 36.38 C
ATOM 10 O3' G B2025 30.606 116.859 117.233 1.00 37.52 O
ATOM 11 C2' G B2025 33.028 117.395 117.328 1.00 35.02 C
ATOM 12 O2' G B2025 33.097 116.658 118.528 1.00 37.28 O
ATOM 13 C1' G B2025 34.162 116.915 116.417 1.00 35.51 C
ATOM 14 N9 G B2025 34.684 117.935 115.506 1.00 35.52 N
ATOM 15 C8 G B2025 34.212 118.236 114.251 1.00 33.41 C
ATOM 16 N7 G B2025 34.896 119.174 113.656 1.00 33.98 N
ATOM 17 C5 G B2025 35.880 119.520 114.571 1.00 34.76 C
ATOM 18 C6 G B2025 36.921 120.487 114.480 1.00 35.71 C
ATOM 19 O6 G B2025 37.192 121.237 113.541 1.00 38.06 O
ATOM 20 N1 G B2025 37.686 120.530 115.641 1.00 35.08 N
ATOM 21 C2 G B2025 37.482 119.741 116.746 1.00 34.98 C
ATOM 22 N2 G B2025 38.323 119.937 117.770 1.00 33.28 N
ATOM 23 N3 G B2025 36.521 118.827 116.841 1.00 34.02 N
ATOM 24 C4 G B2025 35.761 118.773 115.724 1.00 34.75 C
ATOM 25 P G B2026 29.791 118.149 117.727 1.00 37.79 P
ATOM 26 OP1 G B2026 28.542 117.613 118.325 1.00 40.73 O
ATOM 27 OP2 G B2026 29.706 119.162 116.638 1.00 37.36 O
ATOM 28 O5' G B2026 30.713 118.703 118.899 1.00 35.91 O
TER
Atoms:
OP1: (35.869,112.971,122.859)
OP2: (33.789,111.468,122.650)
C3': (32.219,116.314,123.548)
C1': (30.699,116.143,121.776)
C5': (34.119,115.275,122.208)
O6: (26.972,111.602,122.978)
O4': (31.999,115.887,121.266)
C8: (30.607,113.609,121.918)
C2: (26.602,115.127,122.771)
C6: (27.299,112.779,122.791)
C5: (28.565,113.297,122.431)
C4: (28.709,114.657,122.291)
P: (34.548,112.693,122.248)
C4': (32.995,116.269,122.248)
C2': (30.898,116.901,123.089)
O2': (31.015,118.286,122.821)
N1: (26.356,113.791,122.941)
N2: (25.568,115.956,122.960)
N3: (27.778,115.620,122.440)
N7: (29.766,112.648,122.185)
N9: (30.035,114.856,121.978)
O5': (33.619,113.963,122.471)
O3': (32.871,117.113,124.525)
OP2: (33.789,111.468,122.650)
C3': (32.219,116.314,123.548)
C1': (30.699,116.143,121.776)
C5': (34.119,115.275,122.208)
O6: (26.972,111.602,122.978)
O4': (31.999,115.887,121.266)
C8: (30.607,113.609,121.918)
C2: (26.602,115.127,122.771)
C6: (27.299,112.779,122.791)
C5: (28.565,113.297,122.431)
C4: (28.709,114.657,122.291)
P: (34.548,112.693,122.248)
C4': (32.995,116.269,122.248)
C2': (30.898,116.901,123.089)
O2': (31.015,118.286,122.821)
N1: (26.356,113.791,122.941)
N2: (25.568,115.956,122.960)
N3: (27.778,115.620,122.440)
N7: (29.766,112.648,122.185)
N9: (30.035,114.856,121.978)
O5': (33.619,113.963,122.471)
O3': (32.871,117.113,124.525)
OP1: (29.305,115.937,112.528)
OP2: (30.926,117.742,111.680)
C3': (31.808,117.022,116.501)
C1': (34.162,116.915,116.417)
C5': (31.472,115.359,114.636)
O6: (37.192,121.237,113.541)
O4': (33.645,115.847,115.637)
C8: (34.212,118.236,114.251)
C2: (37.482,119.741,116.746)
C6: (36.921,120.487,114.480)
C5: (35.880,119.520,114.571)
C4: (35.761,118.773,115.724)
P: (30.695,116.439,112.360)
C4': (32.222,115.697,115.898)
C2': (33.028,117.395,117.328)
O2': (33.097,116.658,118.528)
N1: (37.686,120.530,115.641)
N2: (38.323,119.937,117.770)
N3: (36.521,118.827,116.841)
N7: (34.896,119.174,113.656)
N9: (34.684,117.935,115.506)
O5': (31.378,116.523,113.794)
O3': (30.606,116.859,117.233)
OP2: (30.926,117.742,111.680)
C3': (31.808,117.022,116.501)
C1': (34.162,116.915,116.417)
C5': (31.472,115.359,114.636)
O6: (37.192,121.237,113.541)
O4': (33.645,115.847,115.637)
C8: (34.212,118.236,114.251)
C2: (37.482,119.741,116.746)
C6: (36.921,120.487,114.480)
C5: (35.880,119.520,114.571)
C4: (35.761,118.773,115.724)
P: (30.695,116.439,112.360)
C4': (32.222,115.697,115.898)
C2': (33.028,117.395,117.328)
O2': (33.097,116.658,118.528)
N1: (37.686,120.530,115.641)
N2: (38.323,119.937,117.770)
N3: (36.521,118.827,116.841)
N7: (34.896,119.174,113.656)
N9: (34.684,117.935,115.506)
O5': (31.378,116.523,113.794)
O3': (30.606,116.859,117.233)
Image (generated by PyMOL):