ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01199:02025

Extra

PDB:
ATOM 1 O3' G A1198 34.875 112.486 120.542 1.00 35.29 O
ATOM 2 P G A1199 34.654 112.549 122.126 1.00 35.45 P
ATOM 3 OP1 G A1199 35.969 112.843 122.741 1.00 35.20 O
ATOM 4 OP2 G A1199 33.911 111.325 122.522 1.00 34.17 O
ATOM 5 O5' G A1199 33.724 113.821 122.329 1.00 32.40 O
ATOM 6 C5' G A1199 34.237 115.135 122.091 1.00 32.07 C
ATOM 7 C4' G A1199 33.118 116.136 122.113 1.00 33.44 C
ATOM 8 O4' G A1199 32.128 115.736 121.130 1.00 35.32 O
ATOM 9 C3' G A1199 32.330 116.213 123.409 1.00 33.43 C
ATOM 10 O3' G A1199 32.961 117.035 124.381 1.00 34.30 O
ATOM 11 C2' G A1199 31.010 116.779 122.919 1.00 33.51 C
ATOM 12 O2' G A1199 31.125 118.147 122.585 1.00 30.97 O
ATOM 13 C1' G A1199 30.824 115.968 121.636 1.00 32.68 C
ATOM 14 N9 G A1199 30.207 114.666 121.889 1.00 32.35 N
ATOM 15 C8 G A1199 30.827 113.439 121.891 1.00 31.14 C
ATOM 16 N7 G A1199 30.014 112.456 122.161 1.00 31.17 N
ATOM 17 C5 G A1199 28.783 113.068 122.349 1.00 31.70 C
ATOM 18 C6 G A1199 27.520 112.512 122.676 1.00 33.18 C
ATOM 19 O6 G A1199 27.222 111.326 122.862 1.00 34.02 O
ATOM 20 N1 G A1199 26.544 113.495 122.786 1.00 33.72 N
ATOM 21 C2 G A1199 26.754 114.839 122.607 1.00 34.05 C
ATOM 22 N2 G A1199 25.691 115.642 122.778 1.00 35.87 N
ATOM 23 N3 G A1199 27.920 115.364 122.290 1.00 33.96 N
ATOM 24 C4 G A1199 28.884 114.430 122.183 1.00 32.28 C
ATOM 25 P G A1200 32.727 116.739 125.941 1.00 31.90 P
ATOM 26 OP1 G A1200 33.464 117.758 126.714 1.00 32.42 O
ATOM 27 OP2 G A1200 32.972 115.302 126.198 1.00 26.84 O
ATOM 28 O5' G A1200 31.179 117.041 126.138 1.00 34.23 O
TER

ATOM 1 O3' U B2024 31.597 115.032 111.610 1.00 35.25 O
ATOM 2 P G B2025 30.780 116.213 112.328 1.00 37.56 P
ATOM 3 OP1 G B2025 29.418 115.662 112.509 1.00 36.90 O
ATOM 4 OP2 G B2025 30.967 117.498 111.604 1.00 34.35 O
ATOM 5 O5' G B2025 31.479 116.342 113.753 1.00 36.22 O
ATOM 6 C5' G B2025 31.607 115.196 114.615 1.00 35.26 C
ATOM 7 C4' G B2025 32.407 115.551 115.842 1.00 34.65 C
ATOM 8 O4' G B2025 33.818 115.691 115.532 1.00 34.06 O
ATOM 9 C3' G B2025 32.029 116.878 116.454 1.00 34.81 C
ATOM 10 O3' G B2025 30.854 116.717 117.218 1.00 37.44 O
ATOM 11 C2' G B2025 33.272 117.222 117.259 1.00 33.11 C
ATOM 12 O2' G B2025 33.352 116.459 118.445 1.00 30.09 O
ATOM 13 C1' G B2025 34.375 116.741 116.312 1.00 33.38 C
ATOM 14 N9 G B2025 34.893 117.762 115.398 1.00 33.50 N
ATOM 15 C8 G B2025 34.432 118.037 114.132 1.00 32.79 C
ATOM 16 N7 G B2025 35.110 118.975 113.530 1.00 33.19 N
ATOM 17 C5 G B2025 36.076 119.353 114.452 1.00 33.72 C
ATOM 18 C6 G B2025 37.109 120.333 114.358 1.00 33.66 C
ATOM 19 O6 G B2025 37.378 121.079 113.416 1.00 34.29 O
ATOM 20 N1 G B2025 37.862 120.397 115.521 1.00 32.99 N
ATOM 21 C2 G B2025 37.654 119.629 116.637 1.00 32.37 C
ATOM 22 N2 G B2025 38.486 119.855 117.656 1.00 29.52 N
ATOM 23 N3 G B2025 36.698 118.710 116.743 1.00 32.24 N
ATOM 24 C4 G B2025 35.952 118.624 115.618 1.00 33.19 C
ATOM 25 P G B2026 30.009 118.003 117.659 1.00 39.32 P
ATOM 26 OP1 G B2026 28.705 117.455 118.122 1.00 41.83 O
ATOM 27 OP2 G B2026 30.028 119.044 116.594 1.00 40.15 O
ATOM 28 O5' G B2026 30.833 118.548 118.906 1.00 37.85 O
TER

Atoms:
OP1: (35.969,112.843,122.741)
OP2: (33.911,111.325,122.522)
C3': (32.330,116.213,123.409)
C1': (30.824,115.968,121.636)
C5': (34.237,115.135,122.091)
O6: (27.222,111.326,122.862)
O4': (32.128,115.736,121.130)
C8: (30.827,113.439,121.891)
C2: (26.754,114.839,122.607)
C6: (27.520,112.512,122.676)
C5: (28.783,113.068,122.349)
C4: (28.884,114.430,122.183)
P: (34.654,112.549,122.126)
C4': (33.118,116.136,122.113)
C2': (31.010,116.779,122.919)
O2': (31.125,118.147,122.585)
N1: (26.544,113.495,122.786)
N2: (25.691,115.642,122.778)
N3: (27.920,115.364,122.290)
N7: (30.014,112.456,122.161)
N9: (30.207,114.666,121.889)
O5': (33.724,113.821,122.329)
O3': (32.961,117.035,124.381)
OP1: (29.418,115.662,112.509)
OP2: (30.967,117.498,111.604)
C3': (32.029,116.878,116.454)
C1': (34.375,116.741,116.312)
C5': (31.607,115.196,114.615)
O6: (37.378,121.079,113.416)
O4': (33.818,115.691,115.532)
C8: (34.432,118.037,114.132)
C2: (37.654,119.629,116.637)
C6: (37.109,120.333,114.358)
C5: (36.076,119.353,114.452)
C4: (35.952,118.624,115.618)
P: (30.780,116.213,112.328)
C4': (32.407,115.551,115.842)
C2': (33.272,117.222,117.259)
O2': (33.352,116.459,118.445)
N1: (37.862,120.397,115.521)
N2: (38.486,119.855,117.656)
N3: (36.698,118.710,116.743)
N7: (35.110,118.975,113.530)
N9: (34.893,117.762,115.398)
O5': (31.479,116.342,113.753)
O3': (30.854,116.717,117.218)
Image (generated by PyMOL):
PyMOL image
show in jmol