ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:01247:01246

Extra

PDB:
ATOM 1 O3' A A1246 15.780 84.818 90.900 1.00 46.38 O
ATOM 2 P U A1247 16.567 85.248 89.567 1.00 44.36 P
ATOM 3 OP1 U A1247 17.593 86.241 89.988 1.00 45.60 O
ATOM 4 OP2 U A1247 15.577 85.618 88.528 1.00 43.35 O
ATOM 5 O5' U A1247 17.288 83.906 89.094 1.00 43.82 O
ATOM 6 C5' U A1247 18.500 83.458 89.716 1.00 42.58 C
ATOM 7 C4' U A1247 18.893 82.091 89.191 1.00 43.45 C
ATOM 8 O4' U A1247 17.815 81.146 89.429 1.00 41.50 O
ATOM 9 C3' U A1247 19.129 81.973 87.695 1.00 44.47 C
ATOM 10 O3' U A1247 20.420 82.439 87.317 1.00 47.58 O
ATOM 11 C2' U A1247 18.970 80.473 87.473 1.00 43.25 C
ATOM 12 O2' U A1247 20.079 79.703 87.900 1.00 44.37 O
ATOM 13 C1' U A1247 17.798 80.167 88.400 1.00 40.52 C
ATOM 14 N1 U A1247 16.513 80.251 87.695 1.00 39.05 N
ATOM 15 C2 U A1247 16.164 79.208 86.852 1.00 39.44 C
ATOM 16 O2 U A1247 16.882 78.240 86.652 1.00 39.32 O
ATOM 17 N3 U A1247 14.943 79.343 86.246 1.00 39.57 N
ATOM 18 C4 U A1247 14.062 80.393 86.381 1.00 40.32 C
ATOM 19 O4 U A1247 12.997 80.369 85.767 1.00 43.46 O
ATOM 20 C5 U A1247 14.500 81.435 87.253 1.00 40.40 C
ATOM 21 C6 U A1247 15.679 81.331 87.866 1.00 40.29 C
ATOM 22 P C A1248 20.559 83.543 86.153 1.00 47.82 P
ATOM 23 OP1 C A1248 19.580 83.238 85.064 1.00 45.33 O
ATOM 24 OP2 C A1248 22.014 83.637 85.836 1.00 47.65 O
ATOM 25 O5' C A1248 20.142 84.901 86.873 1.00 46.46 O
TER

ATOM 1 O3' A B1245 12.618 84.365 87.100 1.00 48.09 O
ATOM 2 P A B1246 11.593 84.764 88.265 1.00 48.70 P
ATOM 3 OP1 A B1246 10.328 84.000 88.025 1.00 51.04 O
ATOM 4 OP2 A B1246 11.540 86.242 88.401 1.00 48.68 O
ATOM 5 O5' A B1246 12.285 84.141 89.554 1.00 46.09 O
ATOM 6 C5' A B1246 12.584 84.938 90.707 1.00 46.09 C
ATOM 7 C4' A B1246 13.552 84.192 91.580 1.00 45.54 C
ATOM 8 O4' A B1246 12.934 82.940 91.974 1.00 45.26 O
ATOM 9 C3' A B1246 14.816 83.776 90.849 1.00 46.11 C
ATOM 10 O3' A B1246 15.780 84.818 90.900 1.00 46.38 O
ATOM 11 C2' A B1246 15.238 82.538 91.623 1.00 46.46 C
ATOM 12 O2' A B1246 15.805 82.880 92.872 1.00 49.75 O
ATOM 13 C1' A B1246 13.882 81.887 91.888 1.00 45.16 C
ATOM 14 N9 A B1246 13.444 80.965 90.834 1.00 43.89 N
ATOM 15 C8 A B1246 12.368 81.104 89.991 1.00 43.25 C
ATOM 16 N7 A B1246 12.223 80.111 89.148 1.00 43.34 N
ATOM 17 C5 A B1246 13.271 79.259 89.454 1.00 42.94 C
ATOM 18 C6 A B1246 13.674 78.027 88.911 1.00 44.60 C
ATOM 19 N6 A B1246 13.042 77.414 87.895 1.00 44.47 N
ATOM 20 N1 A B1246 14.765 77.435 89.446 1.00 44.95 N
ATOM 21 C2 A B1246 15.402 78.054 90.453 1.00 45.02 C
ATOM 22 N3 A B1246 15.120 79.214 91.044 1.00 44.26 N
ATOM 23 C4 A B1246 14.031 79.771 90.491 1.00 43.15 C
ATOM 24 P U B1247 16.567 85.248 89.567 1.00 44.36 P
ATOM 25 OP1 U B1247 17.593 86.241 89.988 1.00 45.60 O
ATOM 26 OP2 U B1247 15.577 85.618 88.528 1.00 43.35 O
ATOM 27 O5' U B1247 17.288 83.906 89.094 1.00 43.82 O
TER

Atoms:
C4: (14.062,80.393,86.381)
N3: (14.943,79.343,86.246)
OP1: (17.593,86.241,89.988)
OP2: (15.577,85.618,88.528)
C2: (16.164,79.208,86.852)
C1': (17.798,80.167,88.400)
C3': (19.129,81.973,87.695)
O5': (17.288,83.906,89.094)
O4': (17.815,81.146,89.429)
C5': (18.500,83.458,89.716)
P: (16.567,85.248,89.567)
C4': (18.893,82.091,89.191)
C2': (18.970,80.473,87.473)
O2': (20.079,79.703,87.900)
N1: (16.513,80.251,87.695)
O4: (12.997,80.369,85.767)
O2: (16.882,78.240,86.652)
C6: (15.679,81.331,87.866)
C5: (14.500,81.435,87.253)
O3': (20.420,82.439,87.317)
OP1: (10.328,84.000,88.025)
OP2: (11.540,86.242,88.401)
C3': (14.816,83.776,90.849)
C1': (13.882,81.887,91.888)
C5': (12.584,84.938,90.707)
O4': (12.934,82.940,91.974)
C8: (12.368,81.104,89.991)
O2': (15.805,82.880,92.872)
C6: (13.674,78.027,88.911)
C5: (13.271,79.259,89.454)
C4: (14.031,79.771,90.491)
P: (11.593,84.764,88.265)
C4': (13.552,84.192,91.580)
C2': (15.238,82.538,91.623)
C2: (15.402,78.054,90.453)
N1: (14.765,77.435,89.446)
N3: (15.120,79.214,91.044)
N6: (13.042,77.414,87.895)
N7: (12.223,80.111,89.148)
N9: (13.444,80.965,90.834)
O5': (12.285,84.141,89.554)
O3': (15.780,84.818,90.900)
Image (generated by PyMOL):
PyMOL image
show in jmol