ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A1085:A1954

Extra

PDB:
ATOM 1 O3' G A1084 -103.811 -87.183 -10.755 1.00 15.76 O
ATOM 2 P G A1085 -104.645 -87.419 -12.106 1.00 16.74 P
ATOM 3 OP1 G A1085 -104.582 -86.152 -12.877 1.00 44.06 O
ATOM 4 OP2 G A1085 -105.974 -87.989 -11.748 1.00 44.06 O
ATOM 5 O5' G A1085 -103.785 -88.506 -12.879 1.00 15.81 O
ATOM 6 C5' G A1085 -102.409 -88.271 -13.139 1.00 15.81 C
ATOM 7 C4' G A1085 -101.694 -89.572 -13.377 1.00 15.81 C
ATOM 8 O4' G A1085 -101.833 -90.418 -12.212 1.00 15.81 O
ATOM 9 C3' G A1085 -102.193 -90.433 -14.525 1.00 15.81 C
ATOM 10 O3' G A1085 -101.606 -90.016 -15.745 1.00 15.81 O
ATOM 11 C2' G A1085 -101.696 -91.813 -14.122 1.00 15.81 C
ATOM 12 O2' G A1085 -100.304 -91.927 -14.348 1.00 15.81 O
ATOM 13 C1' G A1085 -101.899 -91.779 -12.610 1.00 15.81 C
ATOM 14 N9 G A1085 -103.204 -92.292 -12.214 1.00 20.30 N
ATOM 15 C8 G A1085 -104.244 -91.552 -11.704 1.00 20.30 C
ATOM 16 N7 G A1085 -105.314 -92.262 -11.472 1.00 20.30 N
ATOM 17 C5 G A1085 -104.959 -93.551 -11.844 1.00 20.30 C
ATOM 18 C6 G A1085 -105.717 -94.731 -11.831 1.00 20.30 C
ATOM 19 O6 G A1085 -106.893 -94.875 -11.478 1.00 20.30 O
ATOM 20 N1 G A1085 -104.983 -95.817 -12.293 1.00 20.30 N
ATOM 21 C2 G A1085 -103.685 -95.762 -12.723 1.00 20.30 C
ATOM 22 N2 G A1085 -103.158 -96.919 -13.156 1.00 20.30 N
ATOM 23 N3 G A1085 -102.956 -94.654 -12.736 1.00 20.30 N
ATOM 24 C4 G A1085 -103.655 -93.592 -12.291 1.00 20.30 C
ATOM 25 P G A1086 -102.424 -90.180 -17.114 1.00 14.50 P
ATOM 26 OP1 G A1086 -101.557 -89.546 -18.158 1.00 27.62 O
ATOM 27 OP2 G A1086 -103.829 -89.714 -16.919 1.00 27.62 O
ATOM 28 O5' G A1086 -102.431 -91.749 -17.359 1.00 35.88 O
TER

ATOM 1 O3' G B1953 -98.647 -91.138 -3.125 1.00 18.65 O
ATOM 2 P G B1954 -97.912 -92.076 -4.205 1.00 34.51 P
ATOM 3 OP1 G B1954 -98.608 -93.382 -4.089 1.00 34.06 O
ATOM 4 OP2 G B1954 -96.438 -92.011 -4.023 1.00 34.06 O
ATOM 5 O5' G B1954 -98.255 -91.396 -5.606 1.00 8.93 O
ATOM 6 C5' G B1954 -99.612 -91.330 -6.083 1.00 8.93 C
ATOM 7 C4' G B1954 -99.677 -90.558 -7.379 1.00 8.93 C
ATOM 8 O4' G B1954 -99.391 -89.161 -7.125 1.00 8.93 O
ATOM 9 C3' G B1954 -98.659 -90.974 -8.430 1.00 8.93 C
ATOM 10 O3' G B1954 -99.106 -92.090 -9.195 1.00 8.93 O
ATOM 11 C2' G B1954 -98.470 -89.703 -9.260 1.00 8.93 C
ATOM 12 O2' G B1954 -99.392 -89.493 -10.303 1.00 8.93 O
ATOM 13 C1' G B1954 -98.668 -88.613 -8.212 1.00 8.93 C
ATOM 14 N9 G B1954 -97.372 -88.168 -7.731 1.00 18.48 N
ATOM 15 C8 G B1954 -96.643 -88.690 -6.694 1.00 18.48 C
ATOM 16 N7 G B1954 -95.476 -88.127 -6.562 1.00 18.48 N
ATOM 17 C5 G B1954 -95.446 -87.167 -7.561 1.00 18.48 C
ATOM 18 C6 G B1954 -94.438 -86.260 -7.917 1.00 18.48 C
ATOM 19 O6 G B1954 -93.322 -86.124 -7.418 1.00 18.48 O
ATOM 20 N1 G B1954 -94.825 -85.458 -8.976 1.00 18.48 N
ATOM 21 C2 G B1954 -96.028 -85.528 -9.611 1.00 18.48 C
ATOM 22 N2 G B1954 -96.218 -84.661 -10.600 1.00 18.48 N
ATOM 23 N3 G B1954 -96.976 -86.382 -9.299 1.00 18.48 N
ATOM 24 C4 G B1954 -96.618 -87.166 -8.272 1.00 18.48 C
ATOM 25 P C B1955 -98.025 -93.043 -9.905 1.00 9.04 P
ATOM 26 OP1 C B1955 -98.840 -94.037 -10.651 1.00 40.25 O
ATOM 27 OP2 C B1955 -97.047 -93.509 -8.886 1.00 40.25 O
ATOM 28 O5' C B1955 -97.254 -92.093 -10.932 1.00 19.84 O
TER

Atoms:
OP1: (-104.582,-86.152,-12.877)
OP2: (-105.974,-87.989,-11.748)
C3': (-102.193,-90.433,-14.525)
C1': (-101.899,-91.779,-12.610)
C5': (-102.409,-88.271,-13.139)
O6: (-106.893,-94.875,-11.478)
O4': (-101.833,-90.418,-12.212)
C8: (-104.244,-91.552,-11.704)
C2: (-103.685,-95.762,-12.723)
C6: (-105.717,-94.731,-11.831)
C5: (-104.959,-93.551,-11.844)
C4: (-103.655,-93.592,-12.291)
P: (-104.645,-87.419,-12.106)
C4': (-101.694,-89.572,-13.377)
C2': (-101.696,-91.813,-14.122)
O2': (-100.304,-91.927,-14.348)
N1: (-104.983,-95.817,-12.293)
N2: (-103.158,-96.919,-13.156)
N3: (-102.956,-94.654,-12.736)
N7: (-105.314,-92.262,-11.472)
N9: (-103.204,-92.292,-12.214)
O5': (-103.785,-88.506,-12.879)
O3': (-101.606,-90.016,-15.745)
OP1: (-98.608,-93.382,-4.089)
OP2: (-96.438,-92.011,-4.023)
C3': (-98.659,-90.974,-8.430)
C1': (-98.668,-88.613,-8.212)
C5': (-99.612,-91.330,-6.083)
O6: (-93.322,-86.124,-7.418)
O4': (-99.391,-89.161,-7.125)
C8: (-96.643,-88.690,-6.694)
C2: (-96.028,-85.528,-9.611)
C6: (-94.438,-86.260,-7.917)
C5: (-95.446,-87.167,-7.561)
C4: (-96.618,-87.166,-8.272)
P: (-97.912,-92.076,-4.205)
C4': (-99.677,-90.558,-7.379)
C2': (-98.470,-89.703,-9.260)
O2': (-99.392,-89.493,-10.303)
N1: (-94.825,-85.458,-8.976)
N2: (-96.218,-84.661,-10.600)
N3: (-96.976,-86.382,-9.299)
N7: (-95.476,-88.127,-6.562)
N9: (-97.372,-88.168,-7.731)
O5': (-98.255,-91.396,-5.606)
O3': (-99.106,-92.090,-9.195)
Image (generated by PyMOL):
PyMOL image
show in jmol