Doublet info:
Details
Nucleotide types:
GG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A114:A613
Extra
PDB:
ATOM 1 O3' U A 113 122.212 87.463 -10.498 1.00 58.40 O
ATOM 2 P G A 114 120.684 86.981 -10.339 1.00 59.21 P
ATOM 3 OP1 G A 114 120.034 88.045 -9.520 1.00 60.03 O
ATOM 4 OP2 G A 114 120.640 85.575 -9.882 1.00 60.19 O
ATOM 5 O5' G A 114 120.105 87.032 -11.810 1.00 56.83 O
ATOM 6 C5' G A 114 120.026 88.270 -12.505 1.00 55.17 C
ATOM 7 C4' G A 114 119.646 88.040 -13.939 1.00 54.96 C
ATOM 8 O4' G A 114 120.685 87.292 -14.618 1.00 54.09 O
ATOM 9 C3' G A 114 118.385 87.243 -14.194 1.00 55.50 C
ATOM 10 O3' G A 114 117.221 88.055 -14.038 1.00 57.65 O
ATOM 11 C2' G A 114 118.600 86.757 -15.625 1.00 55.37 C
ATOM 12 O2' G A 114 118.287 87.723 -16.607 1.00 56.31 O
ATOM 13 C1' G A 114 120.110 86.537 -15.664 1.00 54.58 C
ATOM 14 N9 G A 114 120.481 85.135 -15.511 1.00 55.33 N
ATOM 15 C8 G A 114 120.768 84.459 -14.345 1.00 54.62 C
ATOM 16 N7 G A 114 121.061 83.199 -14.543 1.00 55.42 N
ATOM 17 C5 G A 114 120.969 83.034 -15.924 1.00 56.38 C
ATOM 18 C6 G A 114 121.182 81.875 -16.742 1.00 56.72 C
ATOM 19 O6 G A 114 121.547 80.733 -16.401 1.00 59.20 O
ATOM 20 N1 G A 114 120.938 82.151 -18.083 1.00 54.12 N
ATOM 21 C2 G A 114 120.560 83.369 -18.581 1.00 53.31 C
ATOM 22 N2 G A 114 120.348 83.421 -19.897 1.00 53.51 N
ATOM 23 N3 G A 114 120.393 84.456 -17.844 1.00 53.20 N
ATOM 24 C4 G A 114 120.606 84.217 -16.534 1.00 55.27 C
ATOM 25 P G A 115 115.752 87.378 -14.054 1.00 59.81 P
ATOM 26 OP1 G A 115 114.770 88.509 -13.922 1.00 57.10 O
ATOM 27 OP2 G A 115 115.739 86.248 -13.079 1.00 57.66 O
ATOM 28 O5' G A 115 115.626 86.814 -15.534 1.00 56.73 O
TER
ATOM 1 O3' C B 612 121.026 91.419 -18.850 1.00 61.77 O
ATOM 2 P G B 613 119.847 92.105 -19.692 1.00 64.26 P
ATOM 3 OP1 G B 613 119.895 91.575 -21.096 1.00 65.07 O
ATOM 4 OP2 G B 613 119.952 93.562 -19.429 1.00 64.31 O
ATOM 5 O5' G B 613 118.512 91.541 -19.043 1.00 62.68 O
ATOM 6 C5' G B 613 118.172 90.156 -19.182 1.00 62.71 C
ATOM 7 C4' G B 613 116.796 89.886 -18.629 1.00 62.81 C
ATOM 8 O4' G B 613 116.795 90.027 -17.188 1.00 63.84 O
ATOM 9 C3' G B 613 115.691 90.807 -19.104 1.00 62.93 C
ATOM 10 O3' G B 613 115.193 90.386 -20.345 1.00 63.38 O
ATOM 11 C2' G B 613 114.658 90.670 -17.994 1.00 62.48 C
ATOM 12 O2' G B 613 113.937 89.468 -18.111 1.00 62.68 O
ATOM 13 C1' G B 613 115.544 90.541 -16.758 1.00 62.73 C
ATOM 14 N9 G B 613 115.772 91.833 -16.119 1.00 61.59 N
ATOM 15 C8 G B 613 116.924 92.579 -16.152 1.00 61.01 C
ATOM 16 N7 G B 613 116.823 93.704 -15.503 1.00 61.70 N
ATOM 17 C5 G B 613 115.529 93.698 -15.009 1.00 60.81 C
ATOM 18 C6 G B 613 114.848 94.658 -14.237 1.00 60.74 C
ATOM 19 O6 G B 613 115.265 95.743 -13.816 1.00 62.01 O
ATOM 20 N1 G B 613 113.549 94.258 -13.959 1.00 59.16 N
ATOM 21 C2 G B 613 112.982 93.084 -14.373 1.00 59.99 C
ATOM 22 N2 G B 613 111.716 92.879 -13.995 1.00 61.55 N
ATOM 23 N3 G B 613 113.608 92.178 -15.100 1.00 60.39 N
ATOM 24 C4 G B 613 114.869 92.548 -15.379 1.00 60.57 C
ATOM 25 P U B 614 114.482 91.448 -21.309 1.00 63.84 P
ATOM 26 OP1 U B 614 114.048 90.671 -22.525 1.00 62.51 O
ATOM 27 OP2 U B 614 115.388 92.607 -21.423 1.00 63.25 O
ATOM 28 O5' U B 614 113.206 91.923 -20.491 1.00 63.43 O
TER
ATOM 2 P G A 114 120.684 86.981 -10.339 1.00 59.21 P
ATOM 3 OP1 G A 114 120.034 88.045 -9.520 1.00 60.03 O
ATOM 4 OP2 G A 114 120.640 85.575 -9.882 1.00 60.19 O
ATOM 5 O5' G A 114 120.105 87.032 -11.810 1.00 56.83 O
ATOM 6 C5' G A 114 120.026 88.270 -12.505 1.00 55.17 C
ATOM 7 C4' G A 114 119.646 88.040 -13.939 1.00 54.96 C
ATOM 8 O4' G A 114 120.685 87.292 -14.618 1.00 54.09 O
ATOM 9 C3' G A 114 118.385 87.243 -14.194 1.00 55.50 C
ATOM 10 O3' G A 114 117.221 88.055 -14.038 1.00 57.65 O
ATOM 11 C2' G A 114 118.600 86.757 -15.625 1.00 55.37 C
ATOM 12 O2' G A 114 118.287 87.723 -16.607 1.00 56.31 O
ATOM 13 C1' G A 114 120.110 86.537 -15.664 1.00 54.58 C
ATOM 14 N9 G A 114 120.481 85.135 -15.511 1.00 55.33 N
ATOM 15 C8 G A 114 120.768 84.459 -14.345 1.00 54.62 C
ATOM 16 N7 G A 114 121.061 83.199 -14.543 1.00 55.42 N
ATOM 17 C5 G A 114 120.969 83.034 -15.924 1.00 56.38 C
ATOM 18 C6 G A 114 121.182 81.875 -16.742 1.00 56.72 C
ATOM 19 O6 G A 114 121.547 80.733 -16.401 1.00 59.20 O
ATOM 20 N1 G A 114 120.938 82.151 -18.083 1.00 54.12 N
ATOM 21 C2 G A 114 120.560 83.369 -18.581 1.00 53.31 C
ATOM 22 N2 G A 114 120.348 83.421 -19.897 1.00 53.51 N
ATOM 23 N3 G A 114 120.393 84.456 -17.844 1.00 53.20 N
ATOM 24 C4 G A 114 120.606 84.217 -16.534 1.00 55.27 C
ATOM 25 P G A 115 115.752 87.378 -14.054 1.00 59.81 P
ATOM 26 OP1 G A 115 114.770 88.509 -13.922 1.00 57.10 O
ATOM 27 OP2 G A 115 115.739 86.248 -13.079 1.00 57.66 O
ATOM 28 O5' G A 115 115.626 86.814 -15.534 1.00 56.73 O
TER
ATOM 1 O3' C B 612 121.026 91.419 -18.850 1.00 61.77 O
ATOM 2 P G B 613 119.847 92.105 -19.692 1.00 64.26 P
ATOM 3 OP1 G B 613 119.895 91.575 -21.096 1.00 65.07 O
ATOM 4 OP2 G B 613 119.952 93.562 -19.429 1.00 64.31 O
ATOM 5 O5' G B 613 118.512 91.541 -19.043 1.00 62.68 O
ATOM 6 C5' G B 613 118.172 90.156 -19.182 1.00 62.71 C
ATOM 7 C4' G B 613 116.796 89.886 -18.629 1.00 62.81 C
ATOM 8 O4' G B 613 116.795 90.027 -17.188 1.00 63.84 O
ATOM 9 C3' G B 613 115.691 90.807 -19.104 1.00 62.93 C
ATOM 10 O3' G B 613 115.193 90.386 -20.345 1.00 63.38 O
ATOM 11 C2' G B 613 114.658 90.670 -17.994 1.00 62.48 C
ATOM 12 O2' G B 613 113.937 89.468 -18.111 1.00 62.68 O
ATOM 13 C1' G B 613 115.544 90.541 -16.758 1.00 62.73 C
ATOM 14 N9 G B 613 115.772 91.833 -16.119 1.00 61.59 N
ATOM 15 C8 G B 613 116.924 92.579 -16.152 1.00 61.01 C
ATOM 16 N7 G B 613 116.823 93.704 -15.503 1.00 61.70 N
ATOM 17 C5 G B 613 115.529 93.698 -15.009 1.00 60.81 C
ATOM 18 C6 G B 613 114.848 94.658 -14.237 1.00 60.74 C
ATOM 19 O6 G B 613 115.265 95.743 -13.816 1.00 62.01 O
ATOM 20 N1 G B 613 113.549 94.258 -13.959 1.00 59.16 N
ATOM 21 C2 G B 613 112.982 93.084 -14.373 1.00 59.99 C
ATOM 22 N2 G B 613 111.716 92.879 -13.995 1.00 61.55 N
ATOM 23 N3 G B 613 113.608 92.178 -15.100 1.00 60.39 N
ATOM 24 C4 G B 613 114.869 92.548 -15.379 1.00 60.57 C
ATOM 25 P U B 614 114.482 91.448 -21.309 1.00 63.84 P
ATOM 26 OP1 U B 614 114.048 90.671 -22.525 1.00 62.51 O
ATOM 27 OP2 U B 614 115.388 92.607 -21.423 1.00 63.25 O
ATOM 28 O5' U B 614 113.206 91.923 -20.491 1.00 63.43 O
TER
Atoms:
OP1: (120.034,88.045,-9.520)
OP2: (120.640,85.575,-9.882)
C3': (118.385,87.243,-14.194)
C1': (120.110,86.537,-15.664)
C5': (120.026,88.270,-12.505)
O6: (121.547,80.733,-16.401)
O4': (120.685,87.292,-14.618)
C8: (120.768,84.459,-14.345)
C2: (120.560,83.369,-18.581)
C6: (121.182,81.875,-16.742)
C5: (120.969,83.034,-15.924)
C4: (120.606,84.217,-16.534)
P: (120.684,86.981,-10.339)
C4': (119.646,88.040,-13.939)
C2': (118.600,86.757,-15.625)
O2': (118.287,87.723,-16.607)
N1: (120.938,82.151,-18.083)
N2: (120.348,83.421,-19.897)
N3: (120.393,84.456,-17.844)
N7: (121.061,83.199,-14.543)
N9: (120.481,85.135,-15.511)
O5': (120.105,87.032,-11.810)
O3': (117.221,88.055,-14.038)
OP2: (120.640,85.575,-9.882)
C3': (118.385,87.243,-14.194)
C1': (120.110,86.537,-15.664)
C5': (120.026,88.270,-12.505)
O6: (121.547,80.733,-16.401)
O4': (120.685,87.292,-14.618)
C8: (120.768,84.459,-14.345)
C2: (120.560,83.369,-18.581)
C6: (121.182,81.875,-16.742)
C5: (120.969,83.034,-15.924)
C4: (120.606,84.217,-16.534)
P: (120.684,86.981,-10.339)
C4': (119.646,88.040,-13.939)
C2': (118.600,86.757,-15.625)
O2': (118.287,87.723,-16.607)
N1: (120.938,82.151,-18.083)
N2: (120.348,83.421,-19.897)
N3: (120.393,84.456,-17.844)
N7: (121.061,83.199,-14.543)
N9: (120.481,85.135,-15.511)
O5': (120.105,87.032,-11.810)
O3': (117.221,88.055,-14.038)
OP1: (119.895,91.575,-21.096)
OP2: (119.952,93.562,-19.429)
C3': (115.691,90.807,-19.104)
C1': (115.544,90.541,-16.758)
C5': (118.172,90.156,-19.182)
O6: (115.265,95.743,-13.816)
O4': (116.795,90.027,-17.188)
C8: (116.924,92.579,-16.152)
C2: (112.982,93.084,-14.373)
C6: (114.848,94.658,-14.237)
C5: (115.529,93.698,-15.009)
C4: (114.869,92.548,-15.379)
P: (119.847,92.105,-19.692)
C4': (116.796,89.886,-18.629)
C2': (114.658,90.670,-17.994)
O2': (113.937,89.468,-18.111)
N1: (113.549,94.258,-13.959)
N2: (111.716,92.879,-13.995)
N3: (113.608,92.178,-15.100)
N7: (116.823,93.704,-15.503)
N9: (115.772,91.833,-16.119)
O5': (118.512,91.541,-19.043)
O3': (115.193,90.386,-20.345)
OP2: (119.952,93.562,-19.429)
C3': (115.691,90.807,-19.104)
C1': (115.544,90.541,-16.758)
C5': (118.172,90.156,-19.182)
O6: (115.265,95.743,-13.816)
O4': (116.795,90.027,-17.188)
C8: (116.924,92.579,-16.152)
C2: (112.982,93.084,-14.373)
C6: (114.848,94.658,-14.237)
C5: (115.529,93.698,-15.009)
C4: (114.869,92.548,-15.379)
P: (119.847,92.105,-19.692)
C4': (116.796,89.886,-18.629)
C2': (114.658,90.670,-17.994)
O2': (113.937,89.468,-18.111)
N1: (113.549,94.258,-13.959)
N2: (111.716,92.879,-13.995)
N3: (113.608,92.178,-15.100)
N7: (116.823,93.704,-15.503)
N9: (115.772,91.833,-16.119)
O5': (118.512,91.541,-19.043)
O3': (115.193,90.386,-20.345)
Image (generated by PyMOL):