Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0442:015
Extra
PDB:
ATOM 1 O3' A A 441 38.709 136.156 59.738 1.00 32.53 O
ATOM 2 P U A 442 38.916 135.822 61.294 1.00 30.69 P
ATOM 3 OP1 U A 442 37.597 135.453 61.861 1.00 31.79 O
ATOM 4 OP2 U A 442 39.685 136.919 61.904 1.00 32.05 O
ATOM 5 O5' U A 442 39.821 134.513 61.278 1.00 30.31 O
ATOM 6 C5' U A 442 41.203 134.562 60.885 1.00 29.10 C
ATOM 7 C4' U A 442 42.029 133.685 61.795 1.00 29.53 C
ATOM 8 O4' U A 442 41.962 134.225 63.145 1.00 30.61 O
ATOM 9 C3' U A 442 41.576 132.227 61.906 1.00 28.42 C
ATOM 10 O3' U A 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 11 C2' U A 442 40.707 132.261 63.157 1.00 29.53 C
ATOM 12 O2' U A 442 40.548 131.028 63.814 1.00 30.09 O
ATOM 13 C1' U A 442 41.508 133.219 64.024 1.00 31.90 C
ATOM 14 N1 U A 442 40.753 133.838 65.119 1.00 36.66 N
ATOM 15 C2 U A 442 41.172 133.568 66.417 1.00 40.02 C
ATOM 16 O2 U A 442 42.123 132.845 66.678 1.00 43.03 O
ATOM 17 N3 U A 442 40.431 134.169 67.401 1.00 41.03 N
ATOM 18 C4 U A 442 39.338 134.985 67.231 1.00 41.48 C
ATOM 19 O4 U A 442 38.754 135.418 68.222 1.00 45.20 O
ATOM 20 C5 U A 442 38.969 135.219 65.867 1.00 40.39 C
ATOM 21 C6 U A 442 39.673 134.652 64.882 1.00 37.40 C
ATOM 22 P A A 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 23 OP1 A A 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 24 OP2 A A 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 25 O5' A A 443 42.466 130.107 60.005 1.00 29.67 O
TER
ATOM 1 O3' G B 14 34.541 138.702 67.062 1.00 30.00 O
ATOM 2 P A B 15 34.911 137.916 65.713 1.00 31.49 P
ATOM 3 OP1 A B 15 36.379 137.715 65.644 1.00 31.59 O
ATOM 4 OP2 A B 15 34.207 138.551 64.580 1.00 32.37 O
ATOM 5 O5' A B 15 34.239 136.494 65.937 1.00 33.13 O
ATOM 6 C5' A B 15 34.699 135.615 66.969 1.00 30.65 C
ATOM 7 C4' A B 15 33.526 134.938 67.629 1.00 31.75 C
ATOM 8 O4' A B 15 32.747 135.913 68.375 1.00 32.71 O
ATOM 9 C3' A B 15 32.518 134.315 66.683 1.00 32.42 C
ATOM 10 O3' A B 15 32.952 133.043 66.211 1.00 33.57 O
ATOM 11 C2' A B 15 31.275 134.231 67.560 1.00 33.55 C
ATOM 12 O2' A B 15 31.309 133.139 68.451 1.00 33.94 O
ATOM 13 C1' A B 15 31.378 135.535 68.360 1.00 35.56 C
ATOM 14 N9 A B 15 30.588 136.627 67.779 1.00 40.25 N
ATOM 15 C8 A B 15 31.033 137.773 67.157 1.00 41.07 C
ATOM 16 N7 A B 15 30.068 138.547 66.722 1.00 40.61 N
ATOM 17 C5 A B 15 28.909 137.871 67.085 1.00 40.75 C
ATOM 18 C6 A B 15 27.547 138.165 66.906 1.00 41.63 C
ATOM 19 N6 A B 15 27.096 139.266 66.300 1.00 42.72 N
ATOM 20 N1 A B 15 26.648 137.278 67.381 1.00 42.87 N
ATOM 21 C2 A B 15 27.094 136.180 67.996 1.00 40.00 C
ATOM 22 N3 A B 15 28.340 135.798 68.230 1.00 40.21 N
ATOM 23 C4 A B 15 29.213 136.694 67.742 1.00 39.85 C
ATOM 24 P U B 16 32.467 132.515 64.765 1.00 32.19 P
ATOM 25 OP1 U B 16 32.896 131.096 64.621 1.00 31.01 O
ATOM 26 OP2 U B 16 32.879 133.509 63.750 1.00 32.15 O
ATOM 27 O5' U B 16 30.884 132.546 64.863 1.00 28.97 O
TER
ATOM 2 P U A 442 38.916 135.822 61.294 1.00 30.69 P
ATOM 3 OP1 U A 442 37.597 135.453 61.861 1.00 31.79 O
ATOM 4 OP2 U A 442 39.685 136.919 61.904 1.00 32.05 O
ATOM 5 O5' U A 442 39.821 134.513 61.278 1.00 30.31 O
ATOM 6 C5' U A 442 41.203 134.562 60.885 1.00 29.10 C
ATOM 7 C4' U A 442 42.029 133.685 61.795 1.00 29.53 C
ATOM 8 O4' U A 442 41.962 134.225 63.145 1.00 30.61 O
ATOM 9 C3' U A 442 41.576 132.227 61.906 1.00 28.42 C
ATOM 10 O3' U A 442 42.706 131.394 62.153 1.00 27.52 O
ATOM 11 C2' U A 442 40.707 132.261 63.157 1.00 29.53 C
ATOM 12 O2' U A 442 40.548 131.028 63.814 1.00 30.09 O
ATOM 13 C1' U A 442 41.508 133.219 64.024 1.00 31.90 C
ATOM 14 N1 U A 442 40.753 133.838 65.119 1.00 36.66 N
ATOM 15 C2 U A 442 41.172 133.568 66.417 1.00 40.02 C
ATOM 16 O2 U A 442 42.123 132.845 66.678 1.00 43.03 O
ATOM 17 N3 U A 442 40.431 134.169 67.401 1.00 41.03 N
ATOM 18 C4 U A 442 39.338 134.985 67.231 1.00 41.48 C
ATOM 19 O4 U A 442 38.754 135.418 68.222 1.00 45.20 O
ATOM 20 C5 U A 442 38.969 135.219 65.867 1.00 40.39 C
ATOM 21 C6 U A 442 39.673 134.652 64.882 1.00 37.40 C
ATOM 22 P A A 443 43.558 130.812 60.923 1.00 29.76 P
ATOM 23 OP1 A A 443 44.498 129.780 61.437 1.00 24.47 O
ATOM 24 OP2 A A 443 44.092 131.967 60.153 1.00 27.59 O
ATOM 25 O5' A A 443 42.466 130.107 60.005 1.00 29.67 O
TER
ATOM 1 O3' G B 14 34.541 138.702 67.062 1.00 30.00 O
ATOM 2 P A B 15 34.911 137.916 65.713 1.00 31.49 P
ATOM 3 OP1 A B 15 36.379 137.715 65.644 1.00 31.59 O
ATOM 4 OP2 A B 15 34.207 138.551 64.580 1.00 32.37 O
ATOM 5 O5' A B 15 34.239 136.494 65.937 1.00 33.13 O
ATOM 6 C5' A B 15 34.699 135.615 66.969 1.00 30.65 C
ATOM 7 C4' A B 15 33.526 134.938 67.629 1.00 31.75 C
ATOM 8 O4' A B 15 32.747 135.913 68.375 1.00 32.71 O
ATOM 9 C3' A B 15 32.518 134.315 66.683 1.00 32.42 C
ATOM 10 O3' A B 15 32.952 133.043 66.211 1.00 33.57 O
ATOM 11 C2' A B 15 31.275 134.231 67.560 1.00 33.55 C
ATOM 12 O2' A B 15 31.309 133.139 68.451 1.00 33.94 O
ATOM 13 C1' A B 15 31.378 135.535 68.360 1.00 35.56 C
ATOM 14 N9 A B 15 30.588 136.627 67.779 1.00 40.25 N
ATOM 15 C8 A B 15 31.033 137.773 67.157 1.00 41.07 C
ATOM 16 N7 A B 15 30.068 138.547 66.722 1.00 40.61 N
ATOM 17 C5 A B 15 28.909 137.871 67.085 1.00 40.75 C
ATOM 18 C6 A B 15 27.547 138.165 66.906 1.00 41.63 C
ATOM 19 N6 A B 15 27.096 139.266 66.300 1.00 42.72 N
ATOM 20 N1 A B 15 26.648 137.278 67.381 1.00 42.87 N
ATOM 21 C2 A B 15 27.094 136.180 67.996 1.00 40.00 C
ATOM 22 N3 A B 15 28.340 135.798 68.230 1.00 40.21 N
ATOM 23 C4 A B 15 29.213 136.694 67.742 1.00 39.85 C
ATOM 24 P U B 16 32.467 132.515 64.765 1.00 32.19 P
ATOM 25 OP1 U B 16 32.896 131.096 64.621 1.00 31.01 O
ATOM 26 OP2 U B 16 32.879 133.509 63.750 1.00 32.15 O
ATOM 27 O5' U B 16 30.884 132.546 64.863 1.00 28.97 O
TER
Atoms:
C4: (39.338,134.985,67.231)
N3: (40.431,134.169,67.401)
OP1: (37.597,135.453,61.861)
OP2: (39.685,136.919,61.904)
C2: (41.172,133.568,66.417)
C1': (41.508,133.219,64.024)
C3': (41.576,132.227,61.906)
O5': (39.821,134.513,61.278)
O4': (41.962,134.225,63.145)
C5': (41.203,134.562,60.885)
P: (38.916,135.822,61.294)
C4': (42.029,133.685,61.795)
C2': (40.707,132.261,63.157)
O2': (40.548,131.028,63.814)
N1: (40.753,133.838,65.119)
O4: (38.754,135.418,68.222)
O2: (42.123,132.845,66.678)
C6: (39.673,134.652,64.882)
C5: (38.969,135.219,65.867)
O3': (42.706,131.394,62.153)
N3: (40.431,134.169,67.401)
OP1: (37.597,135.453,61.861)
OP2: (39.685,136.919,61.904)
C2: (41.172,133.568,66.417)
C1': (41.508,133.219,64.024)
C3': (41.576,132.227,61.906)
O5': (39.821,134.513,61.278)
O4': (41.962,134.225,63.145)
C5': (41.203,134.562,60.885)
P: (38.916,135.822,61.294)
C4': (42.029,133.685,61.795)
C2': (40.707,132.261,63.157)
O2': (40.548,131.028,63.814)
N1: (40.753,133.838,65.119)
O4: (38.754,135.418,68.222)
O2: (42.123,132.845,66.678)
C6: (39.673,134.652,64.882)
C5: (38.969,135.219,65.867)
O3': (42.706,131.394,62.153)
OP1: (36.379,137.715,65.644)
OP2: (34.207,138.551,64.580)
C3': (32.518,134.315,66.683)
C1': (31.378,135.535,68.360)
C5': (34.699,135.615,66.969)
O4': (32.747,135.913,68.375)
C8: (31.033,137.773,67.157)
O2': (31.309,133.139,68.451)
C6: (27.547,138.165,66.906)
C5: (28.909,137.871,67.085)
C4: (29.213,136.694,67.742)
P: (34.911,137.916,65.713)
C4': (33.526,134.938,67.629)
C2': (31.275,134.231,67.560)
C2: (27.094,136.180,67.996)
N1: (26.648,137.278,67.381)
N3: (28.340,135.798,68.230)
N6: (27.096,139.266,66.300)
N7: (30.068,138.547,66.722)
N9: (30.588,136.627,67.779)
O5': (34.239,136.494,65.937)
O3': (32.952,133.043,66.211)
OP2: (34.207,138.551,64.580)
C3': (32.518,134.315,66.683)
C1': (31.378,135.535,68.360)
C5': (34.699,135.615,66.969)
O4': (32.747,135.913,68.375)
C8: (31.033,137.773,67.157)
O2': (31.309,133.139,68.451)
C6: (27.547,138.165,66.906)
C5: (28.909,137.871,67.085)
C4: (29.213,136.694,67.742)
P: (34.911,137.916,65.713)
C4': (33.526,134.938,67.629)
C2': (31.275,134.231,67.560)
C2: (27.094,136.180,67.996)
N1: (26.648,137.278,67.381)
N3: (28.340,135.798,68.230)
N6: (27.096,139.266,66.300)
N7: (30.068,138.547,66.722)
N9: (30.588,136.627,67.779)
O5': (34.239,136.494,65.937)
O3': (32.952,133.043,66.211)
Image (generated by PyMOL):