ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2A43:A9:A8

Extra

PDB:
ATOM 1 O3' G A 8 -9.881 41.776 32.885 1.00 17.76 O
ATOM 2 P U A 9 -10.331 40.502 32.030 1.00 18.53 P
ATOM 3 OP1 U A 9 -10.352 39.363 32.972 1.00 20.39 O
ATOM 4 OP2 U A 9 -9.483 40.356 30.823 1.00 19.77 O
ATOM 5 O5' U A 9 -11.826 40.900 31.649 1.00 22.88 O
ATOM 6 C5' U A 9 -12.926 40.001 31.835 1.00 20.91 C
ATOM 7 C4' U A 9 -13.838 40.694 32.803 1.00 21.79 C
ATOM 8 O4' U A 9 -13.199 40.630 34.103 1.00 23.15 O
ATOM 9 C3' U A 9 -14.006 42.203 32.657 1.00 21.53 C
ATOM 10 O3' U A 9 -15.023 42.405 31.697 1.00 23.27 O
ATOM 11 C2' U A 9 -14.505 42.613 34.054 1.00 24.79 C
ATOM 12 O2' U A 9 -15.920 42.587 34.178 1.00 30.12 O
ATOM 13 C1' U A 9 -13.911 41.523 34.944 1.00 23.31 C
ATOM 14 N1 U A 9 -12.952 41.995 35.954 1.00 23.96 N
ATOM 15 C2 U A 9 -13.383 42.129 37.266 1.00 21.66 C
ATOM 16 O2 U A 9 -14.522 41.880 37.625 1.00 24.89 O
ATOM 17 N3 U A 9 -12.430 42.567 38.152 1.00 21.71 N
ATOM 18 C4 U A 9 -11.106 42.872 37.831 1.00 19.53 C
ATOM 19 O4 U A 9 -10.385 43.307 38.715 1.00 23.43 O
ATOM 20 C5 U A 9 -10.732 42.676 36.472 1.00 19.74 C
ATOM 21 C6 U A 9 -11.672 42.314 35.594 1.00 23.85 C
ATOM 22 P C A 10 -14.937 43.656 30.708 1.00 20.55 P
ATOM 23 OP1 C A 10 -14.884 44.920 31.533 1.00 21.50 O
ATOM 24 OP2 C A 10 -15.997 43.514 29.671 1.00 23.82 O
ATOM 25 O5' C A 10 -13.529 43.530 30.007 1.00 18.21 O
TER

ATOM 1 O3' C B 7 -4.159 43.739 33.154 1.00 17.25 O
ATOM 2 P G B 8 -4.855 42.618 32.293 1.00 18.38 P
ATOM 3 OP1 G B 8 -4.642 41.359 33.067 1.00 20.89 O
ATOM 4 OP2 G B 8 -4.408 42.681 30.854 1.00 18.04 O
ATOM 5 O5' G B 8 -6.385 42.970 32.260 1.00 16.92 O
ATOM 6 C5' G B 8 -7.107 42.943 33.514 1.00 19.57 C
ATOM 7 C4' G B 8 -8.435 43.581 33.306 1.00 16.65 C
ATOM 8 O4' G B 8 -8.316 44.896 32.757 1.00 16.32 O
ATOM 9 C3' G B 8 -9.333 42.896 32.287 1.00 16.91 C
ATOM 10 O3' G B 8 -9.881 41.776 32.885 1.00 17.76 O
ATOM 11 C2' G B 8 -10.348 43.987 31.997 1.00 15.95 C
ATOM 12 O2' G B 8 -11.288 44.100 33.029 1.00 18.61 O
ATOM 13 C1' G B 8 -9.417 45.204 31.931 1.00 15.33 C
ATOM 14 N9 G B 8 -8.912 45.522 30.585 1.00 15.65 N
ATOM 15 C8 G B 8 -7.674 45.249 30.045 1.00 14.88 C
ATOM 16 N7 G B 8 -7.594 45.694 28.787 1.00 13.64 N
ATOM 17 C5 G B 8 -8.816 46.253 28.525 1.00 14.16 C
ATOM 18 C6 G B 8 -9.294 46.857 27.347 1.00 14.76 C
ATOM 19 O6 G B 8 -8.717 47.073 26.265 1.00 15.90 O
ATOM 20 N1 G B 8 -10.602 47.272 27.486 1.00 15.74 N
ATOM 21 C2 G B 8 -11.369 47.136 28.602 1.00 17.55 C
ATOM 22 N2 G B 8 -12.615 47.602 28.532 1.00 20.70 N
ATOM 23 N3 G B 8 -10.909 46.549 29.733 1.00 16.22 N
ATOM 24 C4 G B 8 -9.635 46.152 29.614 1.00 14.44 C
ATOM 25 P U B 9 -10.331 40.502 32.030 1.00 18.53 P
ATOM 26 OP1 U B 9 -10.352 39.363 32.972 1.00 20.39 O
ATOM 27 OP2 U B 9 -9.483 40.356 30.823 1.00 19.77 O
ATOM 28 O5' U B 9 -11.826 40.900 31.649 1.00 22.88 O
TER

Atoms:
C4: (-11.106,42.872,37.831)
N3: (-12.430,42.567,38.152)
OP1: (-10.352,39.363,32.972)
OP2: (-9.483,40.356,30.823)
C2: (-13.383,42.129,37.266)
C1': (-13.911,41.523,34.944)
C3': (-14.006,42.203,32.657)
O5': (-11.826,40.900,31.649)
O4': (-13.199,40.630,34.103)
C5': (-12.926,40.001,31.835)
P: (-10.331,40.502,32.030)
C4': (-13.838,40.694,32.803)
C2': (-14.505,42.613,34.054)
O2': (-15.920,42.587,34.178)
N1: (-12.952,41.995,35.954)
O4: (-10.385,43.307,38.715)
O2: (-14.522,41.880,37.625)
C6: (-11.672,42.314,35.594)
C5: (-10.732,42.676,36.472)
O3': (-15.023,42.405,31.697)
OP1: (-4.642,41.359,33.067)
OP2: (-4.408,42.681,30.854)
C3': (-9.333,42.896,32.287)
C1': (-9.417,45.204,31.931)
C5': (-7.107,42.943,33.514)
O6: (-8.717,47.073,26.265)
O4': (-8.316,44.896,32.757)
C8: (-7.674,45.249,30.045)
C2: (-11.369,47.136,28.602)
C6: (-9.294,46.857,27.347)
C5: (-8.816,46.253,28.525)
C4: (-9.635,46.152,29.614)
P: (-4.855,42.618,32.293)
C4': (-8.435,43.581,33.306)
C2': (-10.348,43.987,31.997)
O2': (-11.288,44.100,33.029)
N1: (-10.602,47.272,27.486)
N2: (-12.615,47.602,28.532)
N3: (-10.909,46.549,29.733)
N7: (-7.594,45.694,28.787)
N9: (-8.912,45.522,30.585)
O5': (-6.385,42.970,32.260)
O3': (-9.881,41.776,32.885)
Image (generated by PyMOL):
PyMOL image
show in jmol