ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3CGS:B8:B9

Extra

PDB:
ATOM 1 O3' G A 7 33.860 -13.614 33.914 1.00 41.76 O
ATOM 2 P A A 8 32.303 -13.213 33.946 1.00 40.92 P
ATOM 3 OP1 A A 8 31.740 -13.525 32.605 1.00 37.34 O
ATOM 4 OP2 A A 8 32.100 -11.874 34.534 1.00 41.72 O
ATOM 5 O5' A A 8 31.709 -14.284 34.972 1.00 38.74 O
ATOM 6 C5' A A 8 32.438 -14.736 36.132 1.00 37.95 C
ATOM 7 C4' A A 8 32.021 -16.162 36.456 1.00 36.13 C
ATOM 8 O4' A A 8 30.585 -16.218 36.407 1.00 34.87 O
ATOM 9 C3' A A 8 32.570 -17.205 35.484 1.00 38.13 C
ATOM 10 O3' A A 8 33.243 -18.220 36.251 1.00 37.00 O
ATOM 11 C2' A A 8 31.345 -17.916 34.886 1.00 34.94 C
ATOM 12 O2' A A 8 31.397 -19.315 35.013 1.00 39.57 O
ATOM 13 C1' A A 8 30.181 -17.360 35.709 1.00 34.40 C
ATOM 14 N9 A A 8 28.916 -17.057 35.058 1.00 28.14 N
ATOM 15 C8 A A 8 28.632 -16.236 33.997 1.00 29.69 C
ATOM 16 N7 A A 8 27.349 -16.143 33.735 1.00 24.64 N
ATOM 17 C5 A A 8 26.757 -16.971 34.680 1.00 23.07 C
ATOM 18 C6 A A 8 25.417 -17.303 34.944 1.00 21.38 C
ATOM 19 N6 A A 8 24.385 -16.793 34.271 1.00 21.06 N
ATOM 20 N1 A A 8 25.170 -18.180 35.943 1.00 20.17 N
ATOM 21 C2 A A 8 26.199 -18.665 36.638 1.00 24.44 C
ATOM 22 N3 A A 8 27.501 -18.415 36.498 1.00 23.88 N
ATOM 23 C4 A A 8 27.712 -17.554 35.486 1.00 25.96 C
ATOM 24 P C A 9 34.738 -18.004 36.821 1.00 40.51 P
ATOM 25 OP1 C A 9 34.871 -19.009 37.907 1.00 41.40 O
ATOM 26 OP2 C A 9 35.003 -16.575 37.123 1.00 40.25 O
ATOM 27 O5' C A 9 35.637 -18.477 35.600 1.00 35.64 O
TER

ATOM 1 O3' A B 8 33.243 -18.220 36.251 1.00 37.00 O
ATOM 2 P C B 9 34.738 -18.004 36.821 1.00 40.51 P
ATOM 3 OP1 C B 9 34.871 -19.009 37.907 1.00 41.40 O
ATOM 4 OP2 C B 9 35.003 -16.575 37.123 1.00 40.25 O
ATOM 5 O5' C B 9 35.637 -18.477 35.600 1.00 35.64 O
ATOM 6 C5' C B 9 35.184 -19.518 34.745 1.00 35.53 C
ATOM 7 C4' C B 9 36.346 -20.192 34.057 1.00 33.11 C
ATOM 8 O4' C B 9 36.923 -19.298 33.067 1.00 36.04 O
ATOM 9 C3' C B 9 37.532 -20.569 34.932 1.00 33.24 C
ATOM 10 O3' C B 9 37.309 -21.785 35.653 1.00 34.18 O
ATOM 11 C2' C B 9 38.632 -20.728 33.890 1.00 33.02 C
ATOM 12 O2' C B 9 38.549 -21.963 33.213 1.00 33.11 O
ATOM 13 C1' C B 9 38.306 -19.588 32.919 1.00 33.35 C
ATOM 14 N1 C B 9 39.084 -18.366 33.195 1.00 29.80 N
ATOM 15 C2 C B 9 40.450 -18.350 32.867 1.00 27.73 C
ATOM 16 O2 C B 9 40.953 -19.347 32.331 1.00 27.02 O
ATOM 17 N3 C B 9 41.182 -17.248 33.142 1.00 28.98 N
ATOM 18 C4 C B 9 40.606 -16.190 33.720 1.00 28.16 C
ATOM 19 N4 C B 9 41.374 -15.129 33.989 1.00 27.35 N
ATOM 20 C5 C B 9 39.216 -16.173 34.051 1.00 30.16 C
ATOM 21 C6 C B 9 38.501 -17.271 33.773 1.00 28.74 C
ATOM 22 P G B 10 38.003 -21.999 37.094 1.00 33.19 P
ATOM 23 OP1 G B 10 37.377 -23.200 37.709 1.00 37.93 O
ATOM 24 OP2 G B 10 37.997 -20.716 37.836 1.00 34.39 O
ATOM 25 O5' G B 10 39.522 -22.348 36.748 1.00 28.50 O
TER

Atoms:
OP1: (31.740,-13.525,32.605)
OP2: (32.100,-11.874,34.534)
C3': (32.570,-17.205,35.484)
C1': (30.181,-17.360,35.709)
C5': (32.438,-14.736,36.132)
O4': (30.585,-16.218,36.407)
C8: (28.632,-16.236,33.997)
O2': (31.397,-19.315,35.013)
C6: (25.417,-17.303,34.944)
C5: (26.757,-16.971,34.680)
C4: (27.712,-17.554,35.486)
P: (32.303,-13.213,33.946)
C4': (32.021,-16.162,36.456)
C2': (31.345,-17.916,34.886)
C2: (26.199,-18.665,36.638)
N1: (25.170,-18.180,35.943)
N3: (27.501,-18.415,36.498)
N6: (24.385,-16.793,34.271)
N7: (27.349,-16.143,33.735)
N9: (28.916,-17.057,35.058)
O5': (31.709,-14.284,34.972)
O3': (33.243,-18.220,36.251)
C2: (40.450,-18.350,32.867)
OP1: (34.871,-19.009,37.907)
OP2: (35.003,-16.575,37.123)
C4: (40.606,-16.190,33.720)
O5': (35.637,-18.477,35.600)
C3': (37.532,-20.569,34.932)
C1': (38.306,-19.588,32.919)
O4': (36.923,-19.298,33.067)
C5': (35.184,-19.518,34.745)
P: (34.738,-18.004,36.821)
O2: (40.953,-19.347,32.331)
C4': (36.346,-20.192,34.057)
C2': (38.632,-20.728,33.890)
O2': (38.549,-21.963,33.213)
N1: (39.084,-18.366,33.195)
N3: (41.182,-17.248,33.142)
N4: (41.374,-15.129,33.989)
C6: (38.501,-17.271,33.773)
C5: (39.216,-16.173,34.051)
O3': (37.309,-21.785,35.653)
Image (generated by PyMOL):
PyMOL image
show in jmol