ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3D2G:B49:B50

Extra

PDB:
ATOM 1 O3' A A 48 -0.499 -33.359 15.363 1.00 37.51 O
ATOM 2 P A A 49 -0.627 -31.736 15.364 1.00 33.06 P
ATOM 3 OP1 A A 49 -0.386 -31.235 16.724 1.00 36.61 O
ATOM 4 OP2 A A 49 -1.952 -31.542 14.786 1.00 33.14 O
ATOM 5 O5' A A 49 0.509 -31.241 14.324 1.00 30.95 O
ATOM 6 C5' A A 49 0.376 -31.467 12.890 1.00 26.08 C
ATOM 7 C4' A A 49 1.794 -31.390 12.333 1.00 29.25 C
ATOM 8 O4' A A 49 2.194 -29.975 12.546 1.00 37.01 O
ATOM 9 C3' A A 49 2.892 -32.172 13.083 1.00 30.18 C
ATOM 10 O3' A A 49 4.065 -32.442 12.332 1.00 32.46 O
ATOM 11 C2' A A 49 3.316 -31.123 14.113 1.00 35.09 C
ATOM 12 O2' A A 49 4.646 -31.336 14.464 1.00 33.22 O
ATOM 13 C1' A A 49 3.325 -29.823 13.300 1.00 29.28 C
ATOM 14 N9 A A 49 3.099 -28.645 14.125 1.00 33.84 N
ATOM 15 C8 A A 49 2.021 -28.426 14.968 1.00 35.67 C
ATOM 16 N7 A A 49 2.089 -27.276 15.644 1.00 38.01 N
ATOM 17 C5 A A 49 3.287 -26.717 15.220 1.00 35.18 C
ATOM 18 C6 A A 49 3.928 -25.488 15.572 1.00 35.49 C
ATOM 19 N6 A A 49 3.369 -24.628 16.452 1.00 37.32 N
ATOM 20 N1 A A 49 5.112 -25.195 14.998 1.00 32.74 N
ATOM 21 C2 A A 49 5.653 -26.063 14.111 1.00 31.55 C
ATOM 22 N3 A A 49 5.135 -27.283 13.747 1.00 34.62 N
ATOM 23 C4 A A 49 3.931 -27.530 14.302 1.00 35.12 C
ATOM 24 P C A 50 4.429 -33.893 11.788 1.00 36.03 P
ATOM 25 OP1 C A 50 5.701 -33.822 11.064 1.00 34.18 O
ATOM 26 OP2 C A 50 3.281 -34.481 11.016 1.00 28.71 O
ATOM 27 O5' C A 50 4.431 -34.721 13.183 1.00 32.89 O
TER

ATOM 1 O3' A B 49 4.065 -32.442 12.332 1.00 32.46 O
ATOM 2 P C B 50 4.429 -33.893 11.788 1.00 36.03 P
ATOM 3 OP1 C B 50 5.701 -33.822 11.064 1.00 34.18 O
ATOM 4 OP2 C B 50 3.281 -34.481 11.016 1.00 28.71 O
ATOM 5 O5' C B 50 4.431 -34.721 13.183 1.00 32.89 O
ATOM 6 C5' C B 50 5.236 -34.551 14.403 1.00 34.58 C
ATOM 7 C4' C B 50 6.070 -35.817 14.666 1.00 42.36 C
ATOM 8 O4' C B 50 5.178 -36.910 15.059 1.00 35.04 O
ATOM 9 C3' C B 50 6.819 -36.381 13.442 1.00 38.73 C
ATOM 10 O3' C B 50 8.130 -35.751 13.340 1.00 39.68 O
ATOM 11 C2' C B 50 6.994 -37.824 13.847 1.00 41.37 C
ATOM 12 O2' C B 50 7.976 -37.928 14.855 1.00 46.25 O
ATOM 13 C1' C B 50 5.616 -38.125 14.442 1.00 38.37 C
ATOM 14 N1 C B 50 4.693 -38.520 13.379 1.00 36.10 N
ATOM 15 C2 C B 50 4.841 -39.816 12.902 1.00 39.53 C
ATOM 16 O2 C B 50 5.711 -40.555 13.419 1.00 39.80 O
ATOM 17 N3 C B 50 4.013 -40.231 11.913 1.00 39.33 N
ATOM 18 C4 C B 50 3.113 -39.406 11.368 1.00 36.35 C
ATOM 19 N4 C B 50 2.304 -39.921 10.409 1.00 29.76 N
ATOM 20 C5 C B 50 2.961 -38.069 11.863 1.00 34.94 C
ATOM 21 C6 C B 50 3.766 -37.662 12.864 1.00 34.22 C
ATOM 22 P A B 51 8.959 -35.532 11.973 1.00 44.18 P
ATOM 23 OP1 A B 51 9.995 -34.590 12.402 1.00 38.86 O
ATOM 24 OP2 A B 51 8.130 -35.256 10.749 1.00 37.40 O
ATOM 25 O5' A B 51 9.690 -36.957 11.771 1.00 42.55 O
TER

Atoms:
OP1: (-0.386,-31.235,16.724)
OP2: (-1.952,-31.542,14.786)
C3': (2.892,-32.172,13.083)
C1': (3.325,-29.823,13.300)
C5': (0.376,-31.467,12.890)
O4': (2.194,-29.975,12.546)
C8: (2.021,-28.426,14.968)
O2': (4.646,-31.336,14.464)
C6: (3.928,-25.488,15.572)
C5: (3.287,-26.717,15.220)
C4: (3.931,-27.530,14.302)
P: (-0.627,-31.736,15.364)
C4': (1.794,-31.390,12.333)
C2': (3.316,-31.123,14.113)
C2: (5.653,-26.063,14.111)
N1: (5.112,-25.195,14.998)
N3: (5.135,-27.283,13.747)
N6: (3.369,-24.628,16.452)
N7: (2.089,-27.276,15.644)
N9: (3.099,-28.645,14.125)
O5': (0.509,-31.241,14.324)
O3': (4.065,-32.442,12.332)
C2: (4.841,-39.816,12.902)
OP1: (5.701,-33.822,11.064)
OP2: (3.281,-34.481,11.016)
C4: (3.113,-39.406,11.368)
O5': (4.431,-34.721,13.183)
C3': (6.819,-36.381,13.442)
C1': (5.616,-38.125,14.442)
O4': (5.178,-36.910,15.059)
C5': (5.236,-34.551,14.403)
P: (4.429,-33.893,11.788)
O2: (5.711,-40.555,13.419)
C4': (6.070,-35.817,14.666)
C2': (6.994,-37.824,13.847)
O2': (7.976,-37.928,14.855)
N1: (4.693,-38.520,13.379)
N3: (4.013,-40.231,11.913)
N4: (2.304,-39.921,10.409)
C6: (3.766,-37.662,12.864)
C5: (2.961,-38.069,11.863)
O3': (8.130,-35.751,13.340)
Image (generated by PyMOL):
PyMOL image
show in jmol